RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ACER1Q8TDN7 264 aa25.15■■□□□ 1.62
TPM1-204ENST00000334895 FAM217BQ9NTX9 383 aaPredicted RBP25.15■■□□□ 1.62
TPM1-204ENST00000334895 DDAH1O94760 285 aa25.15■■□□□ 1.62
TPM1-204ENST00000334895 ECE1P42892 770 aa25.15■■□□□ 1.62
TPM1-204ENST00000334895 IREB2P48200 963 aaKnown RBP25.15■■□□□ 1.62
TPM1-204ENST00000334895 APLP1P51693 650 aa25.15■■□□□ 1.62
TPM1-204ENST00000334895 RCAN1P53805 252 aa25.15■■□□□ 1.62
TPM1-204ENST00000334895 VGLL4Q14135 290 aa25.15■■□□□ 1.62
TPM1-204ENST00000334895 NUP133Q8WUM0 1156 aa25.15■■□□□ 1.62
TPM1-204ENST00000334895 SNCAIPQ9Y6H5 919 aa25.15■■□□□ 1.62
TPM1-204ENST00000334895 HSPA6P17066 643 aa25.14■■□□□ 1.61
TPM1-204ENST00000334895 CDC27P30260 824 aa25.14■■□□□ 1.61
TPM1-204ENST00000334895 METAP2P50579 478 aaKnown RBP eCLIP25.14■■□□□ 1.61
TPM1-204ENST00000334895 SYNE3Q6ZMZ3 975 aa25.14■■□□□ 1.61
TPM1-204ENST00000334895 GOLGA8AA7E2F4 631 aa25.13■■□□□ 1.61
TPM1-204ENST00000334895 DTNBO60941 627 aa25.13■■□□□ 1.61
TPM1-204ENST00000334895 CELF2O95319 508 aaKnown RBP25.13■■□□□ 1.61
TPM1-204ENST00000334895 PTPRAP18433 802 aa25.13■■□□□ 1.61
TPM1-204ENST00000334895 TTLL12Q14166 644 aaPredicted RBP25.13■■□□□ 1.61
TPM1-204ENST00000334895 CST9Q5W186 159 aa25.13■■□□□ 1.61
TPM1-204ENST00000334895 FANCBQ8NB91 859 aa25.12■■□□□ 1.61
TPM1-204ENST00000334895 PICK1Q9NRD5 415 aa25.12■■□□□ 1.61
TPM1-204ENST00000334895 USP17L5A8MUK1 530 aa25.12■■□□□ 1.61
TPM1-204ENST00000334895 ADD1P35611 737 aaKnown RBP25.12■■□□□ 1.61
TPM1-204ENST00000334895 HTRA3P83110 453 aa25.12■■□□□ 1.61
TPM1-204ENST00000334895 LDLRAD1Q5T700 205 aa25.12■■□□□ 1.61
TPM1-204ENST00000334895 CHMP4CQ96CF2 233 aa25.12■■□□□ 1.61
TPM1-204ENST00000334895 CLMNQ96JQ2 1002 aa25.12■■□□□ 1.61
TPM1-204ENST00000334895 ARHGEF10LQ9HCE6 1279 aa25.12■■□□□ 1.61
TPM1-204ENST00000334895 MTMR7Q9Y216 660 aa25.12■■□□□ 1.61
TPM1-204ENST00000334895 TMX2Q9Y320 296 aa25.12■■□□□ 1.61
TPM1-204ENST00000334895 UBE2Q2LH0YL09 131 aa25.11■■□□□ 1.61
TPM1-204ENST00000334895 CTDNEP1O95476 244 aa25.11■■□□□ 1.61
TPM1-204ENST00000334895 CALM1P0DP23 149 aa25.11■■□□□ 1.61
TPM1-204ENST00000334895 CALM2P0DP24 149 aa25.11■■□□□ 1.61
TPM1-204ENST00000334895 CALM3P0DP25 149 aa25.11■■□□□ 1.61
TPM1-204ENST00000334895 GRM4Q14833 912 aa25.11■■□□□ 1.61
TPM1-204ENST00000334895 RTN1Q16799 776 aa25.11■■□□□ 1.61
TPM1-204ENST00000334895 ARMC9Q7Z3E5 817 aa25.11■■□□□ 1.61
TPM1-204ENST00000334895 ANKRD13AQ8IZ07 590 aa25.11■■□□□ 1.61
TPM1-204ENST00000334895 SPRYD3Q8NCJ5 442 aa25.11■■□□□ 1.61
TPM1-204ENST00000334895 FOXD4L1Q9NU39 408 aa25.11■■□□□ 1.61
TPM1-204ENST00000334895 TMEM88BA6NKF7 163 aa25.1■■□□□ 1.61
TPM1-204ENST00000334895 SNHG28P0DPA3 235 aa25.1■■□□□ 1.61
TPM1-204ENST00000334895 PDHBP11177 359 aa25.1■■□□□ 1.61
TPM1-204ENST00000334895 MAP3K14Q99558 947 aa25.1■■□□□ 1.61
TPM1-204ENST00000334895 SYNPO2Q9UMS6 1093 aa25.1■■□□□ 1.61
TPM1-204ENST00000334895 KIAA1755Q5JYT7 1200 aa25.09■■□□□ 1.61
TPM1-204ENST00000334895 GMCL1P1Q8NEA9 526 aa25.09■■□□□ 1.61
TPM1-204ENST00000334895 WDR18Q9BV38 432 aa25.09■■□□□ 1.61
TPM1-204ENST00000334895 GBA2Q9HCG7 927 aaPredicted RBP25.09■■□□□ 1.61
TPM1-204ENST00000334895 MAD2L2Q9UI95 211 aa25.09■■□□□ 1.61
TPM1-204ENST00000334895 CSADQ9Y600 493 aa25.09■■□□□ 1.61
TPM1-204ENST00000334895 F5H6K3 240 aa25.08■■□□□ 1.61
TPM1-204ENST00000334895 KLRC3Q07444 240 aa25.08■■□□□ 1.61
TPM1-204ENST00000334895 NTRK3Q16288 839 aa25.08■■□□□ 1.61
TPM1-204ENST00000334895 CNKSR2Q8WXI2 1034 aa25.08■■□□□ 1.61
TPM1-204ENST00000334895 INTS4Q96HW7 963 aaKnown RBP25.08■■□□□ 1.61
TPM1-204ENST00000334895 ZHX2Q9Y6X8 837 aa25.08■■□□□ 1.61
TPM1-204ENST00000334895 NDUFB10O96000 172 aa25.08■■□□□ 1.6
TPM1-204ENST00000334895 FKBP1BP68106 108 aa25.08■■□□□ 1.6
TPM1-204ENST00000334895 USP17L2Q6R6M4 530 aa25.08■■□□□ 1.6
TPM1-204ENST00000334895 STAG2Q8N3U4 1231 aa25.08■■□□□ 1.6
TPM1-204ENST00000334895 NSUN7Q8NE18 718 aaKnown RBP25.08■■□□□ 1.6
TPM1-204ENST00000334895 ELP3Q9H9T3 547 aa25.08■■□□□ 1.6
TPM1-204ENST00000334895 PALM3A6NDB9 673 aaPredicted RBP25.07■■□□□ 1.6
TPM1-204ENST00000334895 JAK2O60674 1132 aa25.07■■□□□ 1.6
TPM1-204ENST00000334895 PLEKHA8P1O95397 391 aa25.07■■□□□ 1.6
TPM1-204ENST00000334895 SLFN13Q68D06 897 aa25.07■■□□□ 1.6
TPM1-204ENST00000334895 CTCFLQ8NI51 663 aaPredicted RBP25.07■■□□□ 1.6
TPM1-204ENST00000334895 CREBZFQ9NS37 354 aa25.07■■□□□ 1.6
TPM1-204ENST00000334895 PPFIA3O75145 1194 aa25.06■■□□□ 1.6
TPM1-204ENST00000334895 GOLGA8HP0CJ92 632 aa25.06■■□□□ 1.6
TPM1-204ENST00000334895 SPP2Q13103 211 aa25.06■■□□□ 1.6
TPM1-204ENST00000334895 PPP2R5BQ15173 497 aa25.06■■□□□ 1.6
TPM1-204ENST00000334895 ZYXQ15942 572 aaKnown RBP25.06■■□□□ 1.6
TPM1-204ENST00000334895 TMTC3Q6ZXV5 915 aa25.06■■□□□ 1.6
TPM1-204ENST00000334895 CMTR1Q8N1G2 835 aaKnown RBP25.06■■□□□ 1.6
TPM1-204ENST00000334895 ZNF280CQ8ND82 737 aa25.06■■□□□ 1.6
TPM1-204ENST00000334895 KIAA1683Q9H0B3 1180 aa25.06■■□□□ 1.6
TPM1-204ENST00000334895 SH2D4AQ9H788 454 aa25.06■■□□□ 1.6
TPM1-204ENST00000334895 VCPKMTQ9H867 229 aa25.06■■□□□ 1.6
TPM1-204ENST00000334895 RBM28Q9NW13 759 aaKnown RBP25.06■■□□□ 1.6
TPM1-204ENST00000334895 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.06■■□□□ 1.6
TPM1-204ENST00000334895 AFG3L2Q9Y4W6 797 aa25.06■■□□□ 1.6
TPM1-204ENST00000334895 CEP350Q5VT06 3117 aa25.05■■□□□ 1.6
TPM1-204ENST00000334895 FUT2Q10981 343 aa25.05■■□□□ 1.6
TPM1-204ENST00000334895 MTMR2Q13614 643 aa25.05■■□□□ 1.6
TPM1-204ENST00000334895 SLC35G1Q2M3R5 365 aa25.05■■□□□ 1.6
TPM1-204ENST00000334895 SMARCC2Q8TAQ2 1214 aa25.05■■□□□ 1.6
TPM1-204ENST00000334895 AS3MTQ9HBK9 375 aa25.05■■□□□ 1.6
TPM1-204ENST00000334895 DAXXQ9UER7 740 aaPredicted RBP25.05■■□□□ 1.6
TPM1-204ENST00000334895 FRMPD2Q68DX3 1309 aaPredicted RBP25.05■■□□□ 1.6
TPM1-204ENST00000334895 PTPRFP10586 1907 aa25.05■■□□□ 1.6
TPM1-204ENST00000334895 SPDYE5A6NIY4 337 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 DHX16O60231 1041 aaKnown RBP25.04■■□□□ 1.6
TPM1-204ENST00000334895 HSP90AA1P07900 732 aaKnown RBP25.04■■□□□ 1.6
TPM1-204ENST00000334895 PARP1P09874 1014 aaKnown RBP25.04■■□□□ 1.6
TPM1-204ENST00000334895 ZNF543Q08ER8 600 aa25.04■■□□□ 1.6
TPM1-204ENST00000334895 DGKZQ13574 1117 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms