RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 BRF1Q92994 677 aa20.54■□□□□ 0.88
CHGA-202ENST00000334654 BRPF3Q9ULD4 1205 aa20.54■□□□□ 0.88
CHGA-202ENST00000334654 SYNPO2Q9UMS6 1093 aa20.54■□□□□ 0.88
CHGA-202ENST00000334654 CXCL11O14625 94 aa20.53■□□□□ 0.88
CHGA-202ENST00000334654 SLC10A3P09131 477 aa20.53■□□□□ 0.88
CHGA-202ENST00000334654 AK2P54819 239 aa20.53■□□□□ 0.88
CHGA-202ENST00000334654 EVCP57679 992 aa20.53■□□□□ 0.88
CHGA-202ENST00000334654 DGKZQ13574 1117 aa20.53■□□□□ 0.88
CHGA-202ENST00000334654 MTMR2Q13614 643 aa20.53■□□□□ 0.88
CHGA-202ENST00000334654 MOGSQ13724 837 aa20.53■□□□□ 0.88
CHGA-202ENST00000334654 TMTC2Q8N394 836 aa20.53■□□□□ 0.88
CHGA-202ENST00000334654 MS4A4AQ96JQ5 239 aa20.53■□□□□ 0.88
CHGA-202ENST00000334654 EMILIN3Q9NT22 766 aa20.53■□□□□ 0.88
CHGA-202ENST00000334654 ZBTB48P10074 688 aaPredicted RBP20.52■□□□□ 0.88
CHGA-202ENST00000334654 HTRA3P83110 453 aa20.52■□□□□ 0.88
CHGA-202ENST00000334654 PNMA1Q8ND90 353 aa20.52■□□□□ 0.88
CHGA-202ENST00000334654 LARP6Q9BRS8 491 aaKnown RBP20.52■□□□□ 0.88
CHGA-202ENST00000334654 VCPKMTQ9H867 229 aa20.52■□□□□ 0.88
CHGA-202ENST00000334654 A0A0G2JLL6 359 aaPredicted RBP20.51■□□□□ 0.87
CHGA-202ENST00000334654 C19orf81C9J6K1 198 aa20.51■□□□□ 0.87
CHGA-202ENST00000334654 F5H6K3 240 aa20.51■□□□□ 0.87
CHGA-202ENST00000334654 CD2BP2O95400 341 aaKnown RBP20.51■□□□□ 0.87
CHGA-202ENST00000334654 KLRC3Q07444 240 aa20.51■□□□□ 0.87
CHGA-202ENST00000334654 APOBRQ0VD83 1088 aa20.51■□□□□ 0.87
CHGA-202ENST00000334654 TROAPQ12815 778 aa20.51■□□□□ 0.87
CHGA-202ENST00000334654 ZYXQ15942 572 aaKnown RBP20.51■□□□□ 0.87
CHGA-202ENST00000334654 RASGRP2Q7LDG7 609 aa20.51■□□□□ 0.87
CHGA-202ENST00000334654 PRRT2Q7Z6L0 340 aaPredicted RBP20.51■□□□□ 0.87
CHGA-202ENST00000334654 GMCL1P1Q8NEA9 526 aa20.51■□□□□ 0.87
CHGA-202ENST00000334654 KAT14Q9H8E8 782 aa20.51■□□□□ 0.87
CHGA-202ENST00000334654 LOC285556D6RIA3 1793 aa20.51■□□□□ 0.87
CHGA-202ENST00000334654 HMGCS2P54868 508 aa20.5■□□□□ 0.87
CHGA-202ENST00000334654 MKRN3Q13064 507 aaKnown RBP20.5■□□□□ 0.87
CHGA-202ENST00000334654 DEFB115Q30KQ5 88 aa20.5■□□□□ 0.87
CHGA-202ENST00000334654 CYP4F22Q6NT55 531 aa20.5■□□□□ 0.87
CHGA-202ENST00000334654 APOA5Q6Q788 366 aa20.5■□□□□ 0.87
CHGA-202ENST00000334654 C12orf42Q96LP6 360 aa20.5■□□□□ 0.87
CHGA-202ENST00000334654 NDUFB10O96000 172 aa20.5■□□□□ 0.87
CHGA-202ENST00000334654 SNHG28P0DPA3 235 aa20.5■□□□□ 0.87
CHGA-202ENST00000334654 ZNF654Q8IZM8 581 aa20.5■□□□□ 0.87
CHGA-202ENST00000334654 CCDC102AQ96A19 550 aa20.5■□□□□ 0.87
CHGA-202ENST00000334654 FEZ1Q99689 392 aa20.5■□□□□ 0.87
CHGA-202ENST00000334654 SH2D4AQ9H788 454 aa20.5■□□□□ 0.87
CHGA-202ENST00000334654 CCDC69A6NI79 296 aa20.49■□□□□ 0.87
CHGA-202ENST00000334654 USP14P54578 494 aa20.49■□□□□ 0.87
CHGA-202ENST00000334654 FGD1P98174 961 aa20.49■□□□□ 0.87
CHGA-202ENST00000334654 USP17L2Q6R6M4 530 aa20.49■□□□□ 0.87
CHGA-202ENST00000334654 IL27Q8NEV9 243 aa20.49■□□□□ 0.87
CHGA-202ENST00000334654 ZIC5Q96T25 663 aa20.49■□□□□ 0.87
CHGA-202ENST00000334654 MYL10Q9BUA6 226 aa20.49■□□□□ 0.87
CHGA-202ENST00000334654 TPCN1Q9ULQ1 816 aa20.49■□□□□ 0.87
CHGA-202ENST00000334654 HPS5Q9UPZ3 1129 aa20.49■□□□□ 0.87
CHGA-202ENST00000334654 KLF18A0A0U1RQI7 1052 aa20.48■□□□□ 0.87
CHGA-202ENST00000334654 PDHBP11177 359 aa20.48■□□□□ 0.87
CHGA-202ENST00000334654 HSPA6P17066 643 aa20.48■□□□□ 0.87
CHGA-202ENST00000334654 SNAPC2Q13487 334 aa20.48■□□□□ 0.87
CHGA-202ENST00000334654 SLFN13Q68D06 897 aa20.48■□□□□ 0.87
CHGA-202ENST00000334654 NFXL1Q6ZNB6 911 aa20.48■□□□□ 0.87
CHGA-202ENST00000334654 SPICE1Q8N0Z3 855 aa20.48■□□□□ 0.87
CHGA-202ENST00000334654 GMCL1Q96IK5 515 aa20.48■□□□□ 0.87
CHGA-202ENST00000334654 GOPCQ9HD26 462 aa20.48■□□□□ 0.87
CHGA-202ENST00000334654 TESPA1A2RU30 521 aaPredicted RBP20.47■□□□□ 0.87
CHGA-202ENST00000334654 PDIA3P30101 505 aaKnown RBP20.47■□□□□ 0.87
CHGA-202ENST00000334654 GTF2A2P52657 109 aa20.47■□□□□ 0.87
CHGA-202ENST00000334654 ANKRD1Q15327 319 aa20.47■□□□□ 0.87
CHGA-202ENST00000334654 GPAT2Q6NUI2 795 aa20.47■□□□□ 0.87
CHGA-202ENST00000334654 CATIPQ7Z7H3 387 aa20.47■□□□□ 0.87
CHGA-202ENST00000334654 RAB11FIP4Q86YS3 637 aa20.47■□□□□ 0.87
CHGA-202ENST00000334654 BRI3BPQ8WY22 251 aa20.47■□□□□ 0.87
CHGA-202ENST00000334654 CHMP4CQ96CF2 233 aa20.47■□□□□ 0.87
CHGA-202ENST00000334654 NUP88Q99567 741 aaPredicted RBP20.47■□□□□ 0.87
CHGA-202ENST00000334654 SLC12A7Q9Y666 1083 aa20.47■□□□□ 0.87
CHGA-202ENST00000334654 RLFQ13129 1914 aa20.46■□□□□ 0.87
CHGA-202ENST00000334654 DDAH1O94760 285 aa20.46■□□□□ 0.87
CHGA-202ENST00000334654 LARGE1O95461 756 aa20.46■□□□□ 0.87
CHGA-202ENST00000334654 VCAM1P19320 739 aa20.46■□□□□ 0.87
CHGA-202ENST00000334654 RXRAP19793 462 aa20.46■□□□□ 0.87
CHGA-202ENST00000334654 PROCA1Q8NCQ7 364 aaPredicted RBP20.46■□□□□ 0.87
CHGA-202ENST00000334654 LPAR1Q92633 364 aa20.46■□□□□ 0.87
CHGA-202ENST00000334654 ZNF274Q96GC6 653 aaPredicted RBP20.46■□□□□ 0.87
CHGA-202ENST00000334654 CAPNS2Q96L46 248 aa20.46■□□□□ 0.87
CHGA-202ENST00000334654 MAP3K14Q99558 947 aa20.46■□□□□ 0.87
CHGA-202ENST00000334654 PTPN18Q99952 460 aa20.46■□□□□ 0.87
CHGA-202ENST00000334654 FAM217BQ9NTX9 383 aaPredicted RBP20.46■□□□□ 0.87
CHGA-202ENST00000334654 MTMR7Q9Y216 660 aa20.46■□□□□ 0.87
CHGA-202ENST00000334654 PARP14Q460N5 1801 aa20.45■□□□□ 0.86
CHGA-202ENST00000334654 ST18O60284 1047 aa20.45■□□□□ 0.86
CHGA-202ENST00000334654 GRM4Q14833 912 aa20.45■□□□□ 0.86
CHGA-202ENST00000334654 TREML2Q5T2D2 321 aa20.45■□□□□ 0.86
CHGA-202ENST00000334654 NOL8Q76FK4 1167 aaKnown RBP20.45■□□□□ 0.86
CHGA-202ENST00000334654 DCAF4Q8WV16 495 aa20.45■□□□□ 0.86
CHGA-202ENST00000334654 MAD2L2Q9UI95 211 aa20.45■□□□□ 0.86
CHGA-202ENST00000334654 NID2Q14112 1375 aa20.45■□□□□ 0.86
CHGA-202ENST00000334654 CCL15-CCL14A0A0B4J2E2 113 aa20.44■□□□□ 0.86
CHGA-202ENST00000334654 PALM3A6NDB9 673 aaPredicted RBP20.44■□□□□ 0.86
CHGA-202ENST00000334654 ZBTB43O43298 467 aa20.44■□□□□ 0.86
CHGA-202ENST00000334654 RAD21O60216 631 aa20.44■□□□□ 0.86
CHGA-202ENST00000334654 CETPP11597 493 aa20.44■□□□□ 0.86
CHGA-202ENST00000334654 RCAN1P53805 252 aa20.44■□□□□ 0.86
CHGA-202ENST00000334654 ZNF543Q08ER8 600 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms