RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 NCBP1Q09161 790 aaKnown RBP10.79□□□□□ -0.68
COL4A6-201ENST00000334504 ARHGAP44Q17R89 818 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 OR8K1Q8NGG5 319 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 PIP4K2CQ8TBX8 421 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 GPT2Q8TD30 523 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 GRK7Q8WTQ7 553 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 KLHL29Q96CT2 875 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 ACTR5Q9H9F9 607 aaPredicted RBP10.79□□□□□ -0.68
COL4A6-201ENST00000334504 NR1I2O75469 434 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 SP4Q02446 784 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 GABPAQ06546 454 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 DIS3L2Q8IYB7 885 aaKnown RBP10.79□□□□□ -0.68
COL4A6-201ENST00000334504 CENPKQ9BS16 269 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 ANKFY1Q9P2R3 1169 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 MMEL1Q495T6 779 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 ZMYND10O75800 440 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 ABCB4P21439 1286 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 POLD1P28340 1107 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 GAS2L3Q86XJ1 694 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 YIPF3Q9GZM5 350 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 RIC8AQ9NPQ8 531 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 IL9RQ01113 521 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 KSR2Q6VAB6 950 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 COPS6Q7L5N1 327 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 MSH6P52701 1360 aa10.79□□□□□ -0.68
COL4A6-201ENST00000334504 BRD1O95696 1058 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 BCRP11274 1271 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 SKIP12755 728 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 EEF1DP29692 281 aaKnown RBP10.78□□□□□ -0.68
COL4A6-201ENST00000334504 TAF12Q16514 161 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 PRPF31Q8WWY3 499 aaKnown RBP10.78□□□□□ -0.68
COL4A6-201ENST00000334504 SCYL1Q96KG9 808 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 EIF2AQ9BY44 585 aaKnown RBP10.78□□□□□ -0.68
COL4A6-201ENST00000334504 IFT122Q9HBG6 1241 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 NRBP1Q9UHY1 535 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL4A6-201ENST00000334504 ST5P78524 1137 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 ARHGAP4P98171 946 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 MORC3Q14149 939 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 MMS22LQ6ZRQ5 1243 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 CEP70Q8NHQ1 597 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 SEPT8Q92599 483 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 EXOC4Q96A65 974 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 PSDA5PKW4 1024 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-201ENST00000334504 JAK2O60674 1132 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 TTC4O95801 387 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 TCP1P17987 556 aaKnown RBP10.78□□□□□ -0.68
COL4A6-201ENST00000334504 BIRC2Q13490 618 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 SAAL1Q96ER3 474 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 MAGEA9P43362 315 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 CCDC84Q86UT8 332 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-201ENST00000334504 CDC23Q9UJX2 597 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 SOS1Q07889 1333 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-201ENST00000334504 IQCDQ96DY2 449 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 KIAA1468Q9P260 1216 aa10.78□□□□□ -0.68
COL4A6-201ENST00000334504 EXOC5O00471 708 aa10.77□□□□□ -0.68
COL4A6-201ENST00000334504 KCNA4P22459 653 aa10.77□□□□□ -0.68
COL4A6-201ENST00000334504 CEBPAP49715 358 aaPredicted RBP10.77□□□□□ -0.68
COL4A6-201ENST00000334504 DRC3Q9H069 523 aa10.77□□□□□ -0.68
COL4A6-201ENST00000334504 V9GY48 417 aaPredicted RBP10.77□□□□□ -0.68
COL4A6-201ENST00000334504 ZBBXA8MT70 800 aa10.77□□□□□ -0.68
COL4A6-201ENST00000334504 IFNB1P01574 187 aa10.77□□□□□ -0.68
COL4A6-201ENST00000334504 SLC35F6Q8N357 371 aa10.77□□□□□ -0.68
COL4A6-201ENST00000334504 NCAPGQ9BPX3 1015 aa10.77□□□□□ -0.68
COL4A6-201ENST00000334504 TEX13AQ9BXU3 409 aaPredicted RBP10.77□□□□□ -0.68
COL4A6-201ENST00000334504 INTUQ9ULD6 942 aa10.77□□□□□ -0.68
COL4A6-201ENST00000334504 MYO1CO00159 1063 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 BACH1O14867 736 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 ATF2P15336 505 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 CNGA1P29973 690 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 HIBCHQ6NVY1 386 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-201ENST00000334504 TSPYL6Q8N831 410 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 TYW1Q9NV66 732 aaKnown RBP10.77□□□□□ -0.69
COL4A6-201ENST00000334504 CLCN6P51797 869 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 SMTNP53814 917 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 ADCY1Q08828 1119 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 HERC4Q5GLZ8 1057 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-201ENST00000334504 NCAPH2Q6IBW4 605 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 MAEAQ7L5Y9 396 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 ST13P4Q8IZP2 240 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-201ENST00000334504 HAUS4Q9H6D7 363 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 ANGPTL2Q9UKU9 493 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 ENC1O14682 589 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 PFKFB1P16118 471 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 FBLN1P23142 703 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 TMTC3Q6ZXV5 915 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 RAB20Q9NX57 234 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 SCAF11Q99590 1463 aaKnown RBP10.77□□□□□ -0.69
COL4A6-201ENST00000334504 C2orf54Q08AI8 447 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 HAUS3Q68CZ6 603 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 GRAMD4Q6IC98 578 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 CABP7Q86V35 215 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 IFNL2Q8IZJ0 200 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 TMEM87BQ96K49 555 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 TXLNGQ9NUQ3 528 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 PPME1Q9Y570 386 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 NUB1Q9Y5A7 615 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 SLC4A7Q9Y6M7 1214 aa10.77□□□□□ -0.69
COL4A6-201ENST00000334504 POC1B-GALNT4F8VUJ3 575 aa10.76□□□□□ -0.69
COL4A6-201ENST00000334504 KIF1CO43896 1103 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms