RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CTNND2Q9UQB3 1225 aa15.49■□□□□ 0.07
SYNE3-201ENST00000334258 ELOA2Q8IYF1 753 aaPredicted RBP15.49■□□□□ 0.07
SYNE3-201ENST00000334258 HDAC6Q9UBN7 1215 aa15.49■□□□□ 0.07
SYNE3-201ENST00000334258 TRIM10Q9UDY6 481 aa15.49■□□□□ 0.07
SYNE3-201ENST00000334258 CIAO1O76071 339 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 TSR1Q2NL82 804 aaKnown RBP15.48■□□□□ 0.07
SYNE3-201ENST00000334258 CTCFLQ8NI51 663 aaPredicted RBP15.48■□□□□ 0.07
SYNE3-201ENST00000334258 IGDCC4Q8TDY8 1250 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 AIDAQ96BJ3 306 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 CCDC51Q96ER9 411 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 FAM217BQ9NTX9 383 aaPredicted RBP15.48■□□□□ 0.07
SYNE3-201ENST00000334258 TAB2Q9NYJ8 693 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 SRPRBQ9Y5M8 271 aaKnown RBP15.48■□□□□ 0.07
SYNE3-201ENST00000334258 ERVK-24P63145 666 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 STIM1Q13586 685 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 E2F4Q16254 413 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 METTL24Q5JXM2 366 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 LY9Q9HBG7 655 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 CEP83Q9Y592 693 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 CTDSPL2Q05D32 466 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 RTN1Q16799 776 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 CCDC24Q8N4L8 307 aa15.48■□□□□ 0.07
SYNE3-201ENST00000334258 MSL3Q8N5Y2 521 aaKnown RBP15.48■□□□□ 0.07
SYNE3-201ENST00000334258 SRGAP2O75044 1071 aa15.47■□□□□ 0.07
SYNE3-201ENST00000334258 FMNL1O95466 1100 aaPredicted RBP15.47■□□□□ 0.07
SYNE3-201ENST00000334258 RRAGBQ5VZM2 374 aa15.47■□□□□ 0.07
SYNE3-201ENST00000334258 APTXQ7Z2E3 356 aaKnown RBP15.47■□□□□ 0.07
SYNE3-201ENST00000334258 OXER1Q8TDS5 423 aa15.47■□□□□ 0.07
SYNE3-201ENST00000334258 NAPBQ9H115 298 aa15.47■□□□□ 0.07
SYNE3-201ENST00000334258 ABHD10Q9NUJ1 306 aa15.47■□□□□ 0.07
SYNE3-201ENST00000334258 ZSWIM5Q9P217 1185 aa15.47■□□□□ 0.07
SYNE3-201ENST00000334258 MARCH10Q8NA82 808 aaPredicted RBP15.47■□□□□ 0.07
SYNE3-201ENST00000334258 TRIM75PA6NK02 468 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 SNAP23O00161 211 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 TOM1O60784 492 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 MCM3P25205 808 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 EFCAB13Q8IY85 973 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 GSPT2Q8IYD1 628 aaKnown RBP15.46■□□□□ 0.07
SYNE3-201ENST00000334258 MYO1AQ9UBC5 1043 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 MAPK8IP1Q9UQF2 711 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 C5P01031 1676 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 ERICH2A1L162 156 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 IFNAR1P17181 557 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 ATP6V1AP38606 617 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 ARHGAP25P42331 645 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 IFIT5Q13325 482 aaKnown RBP15.46■□□□□ 0.07
SYNE3-201ENST00000334258 KRT31Q15323 416 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 BICDL1Q6ZP65 573 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 PAGE5Q96GU1 130 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 CHP1Q99653 195 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 BLZF1Q9H2G9 400 aa15.46■□□□□ 0.07
SYNE3-201ENST00000334258 FOXP1Q9H334 677 aaPredicted RBP15.46■□□□□ 0.07
SYNE3-201ENST00000334258 EPN1Q9Y6I3 576 aaPredicted RBP15.46■□□□□ 0.07
SYNE3-201ENST00000334258 ZNF532Q9HCE3 1301 aa15.46■□□□□ 0.06
SYNE3-201ENST00000334258 ADD2P35612 726 aa15.46■□□□□ 0.06
SYNE3-201ENST00000334258 CCT5P48643 541 aa15.46■□□□□ 0.06
SYNE3-201ENST00000334258 LIG3P49916 1009 aa15.46■□□□□ 0.06
SYNE3-201ENST00000334258 CCDC122Q5T0U0 273 aa15.46■□□□□ 0.06
SYNE3-201ENST00000334258 WDR93Q6P2C0 686 aa15.46■□□□□ 0.06
SYNE3-201ENST00000334258 EGFL6Q8IUX8 553 aa15.46■□□□□ 0.06
SYNE3-201ENST00000334258 ZNF579Q8NAF0 562 aaKnown RBP15.46■□□□□ 0.06
SYNE3-201ENST00000334258 FAM212AQ96EL1 285 aa15.46■□□□□ 0.06
SYNE3-201ENST00000334258 SAR1BQ9Y6B6 198 aa15.46■□□□□ 0.06
SYNE3-201ENST00000334258 RNF225M0QZC1 329 aaPredicted RBP15.45■□□□□ 0.06
SYNE3-201ENST00000334258 SYF2O95926 243 aaKnown RBP15.45■□□□□ 0.06
SYNE3-201ENST00000334258 GGCXP38435 758 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 MCAMP43121 646 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 USP14P54578 494 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 UBXN1Q04323 297 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 KIAA1328Q86T90 577 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 TADA2BQ86TJ2 420 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 HOMEZQ8IX15 550 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 FAM76AQ8TAV0 307 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 MMS19Q96T76 1030 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 TFR2Q9UP52 801 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 ROBO1Q9Y6N7 1651 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 CCDC172P0C7W6 258 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 GUCY2CP25092 1073 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 PBX1P40424 430 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 CUL4BQ13620 913 aa15.45■□□□□ 0.06
SYNE3-201ENST00000334258 SYMPKQ92797 1274 aaKnown RBP15.45■□□□□ 0.06
SYNE3-201ENST00000334258 EBAG9O00559 213 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 STARD3NLO95772 234 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 CDKAL1Q5VV42 579 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 LDHAL6AQ6ZMR3 332 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 SGMS1Q86VZ5 419 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 HELBQ8NG08 1087 aaPredicted RBP15.44■□□□□ 0.06
SYNE3-201ENST00000334258 BRMS1Q9HCU9 246 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 HPCAL4Q9UM19 191 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 A0A087X0B3 334 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 GOLGA6CA6NDK9 693 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 FAM205CA6NFA0 338 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 GOLGA6DP0CG33 693 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 WTAPQ15007 396 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 NKX1-1Q15270 411 aaPredicted RBP15.44■□□□□ 0.06
SYNE3-201ENST00000334258 CNNM1Q9NRU3 951 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 GOLGA6AQ9NYA3 693 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 A0A087WUV0 522 aaPredicted RBP15.44■□□□□ 0.06
SYNE3-201ENST00000334258 hCG_1642624A0A1W2PR95 340 aa15.44■□□□□ 0.06
SYNE3-201ENST00000334258 NDUFA10O95299 355 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms