RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 FAM217BQ9NTX9 383 aaPredicted RBP19.37■□□□□ 0.69
SHOX-201ENST00000334060 TROAPQ12815 778 aa19.36■□□□□ 0.69
SHOX-201ENST00000334060 USP17L2Q6R6M4 530 aa19.36■□□□□ 0.69
SHOX-201ENST00000334060 ANKRD13AQ8IZ07 590 aa19.36■□□□□ 0.69
SHOX-201ENST00000334060 OPTNQ96CV9 577 aa19.36■□□□□ 0.69
SHOX-201ENST00000334060 WDR19Q8NEZ3 1342 aa19.36■□□□□ 0.69
SHOX-201ENST00000334060 GOLGA8BA8MQT2 603 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 HUNKP57058 714 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 SCRN1Q12765 414 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 ARMC9Q7Z3E5 817 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 SAPCD2Q86UD0 394 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 SGMS1Q86VZ5 419 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 DGKHQ86XP1 1220 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 TMX3Q96JJ7 454 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 ZIC5Q96T25 663 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 ANP32AP39687 249 aaKnown RBP19.35■□□□□ 0.69
SHOX-201ENST00000334060 LIFRP42702 1097 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 TTBK2Q6IQ55 1244 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 CCDC82Q8N4S0 544 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 HOOK2Q96ED9 719 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 PICK1Q9NRD5 415 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 NYAP2Q9P242 653 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 AFG3L2Q9Y4W6 797 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 CSADQ9Y600 493 aa19.35■□□□□ 0.69
SHOX-201ENST00000334060 PLEKHA8P1O95397 391 aa19.34■□□□□ 0.69
SHOX-201ENST00000334060 ADD1P35611 737 aaKnown RBP19.34■□□□□ 0.69
SHOX-201ENST00000334060 HMGCS2P54868 508 aa19.34■□□□□ 0.69
SHOX-201ENST00000334060 KCTD1Q719H9 257 aa19.34■□□□□ 0.69
SHOX-201ENST00000334060 C2orf69Q8N8R5 385 aa19.34■□□□□ 0.69
SHOX-201ENST00000334060 ANKS1AQ92625 1134 aa19.34■□□□□ 0.69
SHOX-201ENST00000334060 KAT14Q9H8E8 782 aa19.34■□□□□ 0.69
SHOX-201ENST00000334060 EMILIN3Q9NT22 766 aa19.34■□□□□ 0.69
SHOX-201ENST00000334060 hCG_1642624A0A1W2PR95 340 aa19.33■□□□□ 0.69
SHOX-201ENST00000334060 ERICH2A1L162 156 aa19.33■□□□□ 0.69
SHOX-201ENST00000334060 CCDC69A6NI79 296 aa19.33■□□□□ 0.69
SHOX-201ENST00000334060 NDUFB10O96000 172 aa19.33■□□□□ 0.69
SHOX-201ENST00000334060 TAL1P17542 331 aaPredicted RBP19.33■□□□□ 0.69
SHOX-201ENST00000334060 CCDC83Q8IWF9 413 aa19.33■□□□□ 0.69
SHOX-201ENST00000334060 FBXL16Q8N461 479 aa19.33■□□□□ 0.69
SHOX-201ENST00000334060 ALDH8A1Q9H2A2 487 aaPredicted RBP19.33■□□□□ 0.69
SHOX-201ENST00000334060 F5H6K3 240 aa19.33■□□□□ 0.68
SHOX-201ENST00000334060 ST18O60284 1047 aa19.33■□□□□ 0.68
SHOX-201ENST00000334060 PEX10O60683 326 aa19.33■□□□□ 0.68
SHOX-201ENST00000334060 CTDNEP1O95476 244 aa19.33■□□□□ 0.68
SHOX-201ENST00000334060 PDHBP11177 359 aa19.33■□□□□ 0.68
SHOX-201ENST00000334060 TOP1P11387 765 aaKnown RBP19.33■□□□□ 0.68
SHOX-201ENST00000334060 KLRC3Q07444 240 aa19.33■□□□□ 0.68
SHOX-201ENST00000334060 GRM1Q13255 1194 aa19.33■□□□□ 0.68
SHOX-201ENST00000334060 SART3Q15020 963 aaKnown RBP19.33■□□□□ 0.68
SHOX-201ENST00000334060 TMX2Q9Y320 296 aa19.33■□□□□ 0.68
SHOX-201ENST00000334060 SLC12A7Q9Y666 1083 aa19.33■□□□□ 0.68
SHOX-201ENST00000334060 PTPRFP10586 1907 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 SPDYE5A6NIY4 337 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 SLC16A2P36021 539 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 EVCP57679 992 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 SNAP25P60880 206 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 MKL1Q969V6 931 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 TAOK2Q9UL54 1235 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 LIMCH1Q9UPQ0 1083 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 BAZ2BQ9UIF8 2168 aaKnown RBP19.32■□□□□ 0.68
SHOX-201ENST00000334060 JAK2O60674 1132 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 TREML2Q5T2D2 321 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 ZNF280CQ8ND82 737 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 PIBF1Q8WXW3 757 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 FEZ1Q99689 392 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 UBA5Q9GZZ9 404 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 GPCPD1Q9NPB8 672 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 FBXO28Q9NVF7 368 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 MAD2L2Q9UI95 211 aa19.32■□□□□ 0.68
SHOX-201ENST00000334060 MOGSQ13724 837 aa19.31■□□□□ 0.68
SHOX-201ENST00000334060 FAM83BQ5T0W9 1011 aa19.31■□□□□ 0.68
SHOX-201ENST00000334060 SAMD1Q6SPF0 538 aaPredicted RBP19.31■□□□□ 0.68
SHOX-201ENST00000334060 IPO9Q96P70 1041 aaKnown RBP19.31■□□□□ 0.68
SHOX-201ENST00000334060 ABT1Q9ULW3 272 aaKnown RBP19.31■□□□□ 0.68
SHOX-201ENST00000334060 GOLGA8AA7E2F4 631 aa19.3■□□□□ 0.68
SHOX-201ENST00000334060 ZBTB43O43298 467 aa19.3■□□□□ 0.68
SHOX-201ENST00000334060 SLFN13Q68D06 897 aa19.3■□□□□ 0.68
SHOX-201ENST00000334060 SNX21Q969T3 373 aa19.3■□□□□ 0.68
SHOX-201ENST00000334060 SLC10A4Q96EP9 437 aa19.3■□□□□ 0.68
SHOX-201ENST00000334060 K7ELQ4 463 aaPredicted RBP19.3■□□□□ 0.68
SHOX-201ENST00000334060 BACE1P56817 501 aa19.3■□□□□ 0.68
SHOX-201ENST00000334060 ERO1BQ86YB8 467 aa19.3■□□□□ 0.68
SHOX-201ENST00000334060 RASAL3Q86YV0 1011 aa19.3■□□□□ 0.68
SHOX-201ENST00000334060 PHKBQ93100 1093 aa19.3■□□□□ 0.68
SHOX-201ENST00000334060 WNK4Q96J92 1243 aa19.3■□□□□ 0.68
SHOX-201ENST00000334060 VCPKMTQ9H867 229 aa19.3■□□□□ 0.68
SHOX-201ENST00000334060 ISY1Q9ULR0 285 aaKnown RBP19.3■□□□□ 0.68
SHOX-201ENST00000334060 TLL2Q9Y6L7 1015 aa19.3■□□□□ 0.68
SHOX-201ENST00000334060 TMEM88BA6NKF7 163 aa19.29■□□□□ 0.68
SHOX-201ENST00000334060 USP17L10C9JJH3 530 aa19.29■□□□□ 0.68
SHOX-201ENST00000334060 CYTH3O43739 400 aa19.29■□□□□ 0.68
SHOX-201ENST00000334060 VCAM1P19320 739 aa19.29■□□□□ 0.68
SHOX-201ENST00000334060 METAP2P50579 478 aaKnown RBP eCLIP19.29■□□□□ 0.68
SHOX-201ENST00000334060 CYP4F22Q6NT55 531 aa19.29■□□□□ 0.68
SHOX-201ENST00000334060 SRBD1Q8N5C6 995 aaKnown RBP19.29■□□□□ 0.68
SHOX-201ENST00000334060 WDR18Q9BV38 432 aa19.29■□□□□ 0.68
SHOX-201ENST00000334060 ARHGEF10LQ9HCE6 1279 aa19.29■□□□□ 0.68
SHOX-201ENST00000334060 PFKFB2O60825 505 aa19.28■□□□□ 0.68
SHOX-201ENST00000334060 SNHG28P0DPA3 235 aa19.28■□□□□ 0.68
SHOX-201ENST00000334060 FSTL1Q12841 308 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms