RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 CCPG1Q9ULG6 757 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 FRMPD2Q68DX3 1309 aaPredicted RBP12.6□□□□□ -0.39
POLR1B-202ENST00000333990 hCG_1642624A0A1W2PR95 340 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 BMP3P12645 472 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 DGKHQ86XP1 1220 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 MYL5Q02045 173 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 KCTD2Q14681 263 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 TMEM179Q6ZVK1 233 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 OTUD6AQ7L8S5 288 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 SLFN12Q8IYM2 578 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 UBXN4Q92575 508 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 TPCN1Q9ULQ1 816 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 NOP2P46087 812 aaKnown RBP12.6□□□□□ -0.39
POLR1B-202ENST00000333990 STRN3Q13033 797 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 ITPK1Q13572 414 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 FAM160B2Q86V87 743 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 GBP3Q9H0R5 595 aa12.6□□□□□ -0.39
POLR1B-202ENST00000333990 TRAF5O00463 557 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 CCDC169A6NNP5 214 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 POLR2DO15514 142 aaKnown RBP12.59□□□□□ -0.39
POLR1B-202ENST00000333990 PRKAB2O43741 272 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 CABP7Q86V35 215 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 MLKLQ8NB16 471 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 IWS1Q96ST2 819 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 MTA3Q9BTC8 594 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 PXDNLA1KZ92 1463 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 CETN3O15182 167 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 BRD1O95696 1058 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 EPB41P11171 864 aaKnown RBP12.59□□□□□ -0.39
POLR1B-202ENST00000333990 PRDX5P30044 214 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 SLC15A2Q16348 729 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 CDC37L1Q7L3B6 337 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 MSANTD4Q8NCY6 345 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 FBXO18Q8NFZ0 1043 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 FNBP1Q96RU3 617 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 FERMT1Q9BQL6 677 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 SYNCQ9H7C4 482 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 RABGAP1Q9Y3P9 1069 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 ATP6V0A2Q9Y487 856 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 RIPOR2Q9Y4F9 1068 aa12.59□□□□□ -0.39
POLR1B-202ENST00000333990 USP42Q9H9J4 1324 aaKnown RBP12.59□□□□□ -0.39
POLR1B-202ENST00000333990 GOLGA8HP0CJ92 632 aa12.58□□□□□ -0.39
POLR1B-202ENST00000333990 TRAPPC10P48553 1259 aa12.58□□□□□ -0.39
POLR1B-202ENST00000333990 NEK11Q8NG66 645 aa12.58□□□□□ -0.39
POLR1B-202ENST00000333990 ADD3Q9UEY8 706 aaKnown RBP12.58□□□□□ -0.39
POLR1B-202ENST00000333990 PCDHA12Q9UN75 941 aa12.58□□□□□ -0.39
POLR1B-202ENST00000333990 CYP2E1P05181 493 aaPredicted RBP12.58□□□□□ -0.4
POLR1B-202ENST00000333990 HERC4Q5GLZ8 1057 aaPredicted RBP12.58□□□□□ -0.4
POLR1B-202ENST00000333990 APOBEC3FQ8IUX4 373 aaKnown RBP12.58□□□□□ -0.4
POLR1B-202ENST00000333990 MAP7D2Q96T17 732 aa12.58□□□□□ -0.4
POLR1B-202ENST00000333990 MLXIPQ9HAP2 919 aa12.58□□□□□ -0.4
POLR1B-202ENST00000333990 CEP83Q9Y592 693 aa12.58□□□□□ -0.4
POLR1B-202ENST00000333990 TESPA1A2RU30 521 aaPredicted RBP12.58□□□□□ -0.4
POLR1B-202ENST00000333990 CSF1RP07333 972 aa12.58□□□□□ -0.4
POLR1B-202ENST00000333990 FAM173BQ6P4H8 233 aa12.58□□□□□ -0.4
POLR1B-202ENST00000333990 MIER3Q7Z3K6 550 aa12.58□□□□□ -0.4
POLR1B-202ENST00000333990 NCAPG2Q86XI2 1143 aa12.58□□□□□ -0.4
POLR1B-202ENST00000333990 GLG1Q92896 1179 aa12.58□□□□□ -0.4
POLR1B-202ENST00000333990 M0QZ92 97 aa12.58□□□□□ -0.4
POLR1B-202ENST00000333990 CDK8P49336 464 aa12.58□□□□□ -0.4
POLR1B-202ENST00000333990 STX17P56962 302 aa12.58□□□□□ -0.4
POLR1B-202ENST00000333990 MAP3K9P80192 1104 aa12.58□□□□□ -0.4
POLR1B-202ENST00000333990 AOC3Q16853 763 aa12.58□□□□□ -0.4
POLR1B-202ENST00000333990 GPR101Q96P66 508 aaPredicted RBP12.58□□□□□ -0.4
POLR1B-202ENST00000333990 ARHGEF28Q8N1W1 1705 aaKnown RBP12.57□□□□□ -0.4
POLR1B-202ENST00000333990 IQCA1LA6NCM1 817 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 TMCO5BA8MYB1 307 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 EIF3JO75822 258 aaKnown RBP12.57□□□□□ -0.4
POLR1B-202ENST00000333990 CTNNA2P26232 953 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 PRPHP41219 470 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 GPSM2P81274 684 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 FAM212AQ96EL1 285 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 RNF181Q9P0P0 153 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 BRPF3Q9ULD4 1205 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 MROH7-TTC4A0A0A0MT08 1334 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 DDX39AO00148 427 aaKnown RBP12.57□□□□□ -0.4
POLR1B-202ENST00000333990 ZNF202O95125 648 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 IFNAR1P17181 557 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 CASQ1P31415 396 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 STAT2P52630 851 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 R3HDM1Q15032 1099 aaKnown RBP12.57□□□□□ -0.4
POLR1B-202ENST00000333990 FAM84BQ96KN1 310 aaPredicted RBP12.57□□□□□ -0.4
POLR1B-202ENST00000333990 PNMA3Q9UL41 463 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 CALUO43852 315 aaPredicted RBP12.57□□□□□ -0.4
POLR1B-202ENST00000333990 URI1O94763 535 aaPredicted RBP12.57□□□□□ -0.4
POLR1B-202ENST00000333990 GDF11O95390 407 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 OR52Z1P0C646 297 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 GCFC2P16383 781 aaKnown RBP12.57□□□□□ -0.4
POLR1B-202ENST00000333990 ADALQ6DHV7 355 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 LUZP1Q86V48 1076 aa12.57□□□□□ -0.4
POLR1B-202ENST00000333990 NAA15Q9BXJ9 866 aaKnown RBP12.57□□□□□ -0.4
POLR1B-202ENST00000333990 NTSR2O95665 410 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 NEFHP12036 1026 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 MCM3P25205 808 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 ADCK5Q3MIX3 580 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 SLC10A4Q96EP9 437 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 TTC12Q9H892 705 aaPredicted RBP12.56□□□□□ -0.4
POLR1B-202ENST00000333990 ZSWIM5Q9P217 1185 aa12.56□□□□□ -0.4
POLR1B-202ENST00000333990 STYK1Q6J9G0 422 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms