RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 MYO1BO43795 1136 aa15.29■□□□□ 0.04
TUBA1B-201ENST00000332858 URI1O94763 535 aaPredicted RBP15.29■□□□□ 0.04
TUBA1B-201ENST00000332858 CUL4BQ13620 913 aa15.29■□□□□ 0.04
TUBA1B-201ENST00000332858 PPP2R5BQ15173 497 aa15.29■□□□□ 0.04
TUBA1B-201ENST00000332858 PIK3AP1Q6ZUJ8 805 aa15.29■□□□□ 0.04
TUBA1B-201ENST00000332858 TRIML1Q8N9V2 468 aa15.29■□□□□ 0.04
TUBA1B-201ENST00000332858 MORC2Q9Y6X9 1032 aaPredicted RBP15.29■□□□□ 0.04
TUBA1B-201ENST00000332858 RREB1Q92766 1687 aa15.29■□□□□ 0.04
TUBA1B-201ENST00000332858 LAMB2P55268 1798 aa15.29■□□□□ 0.04
TUBA1B-201ENST00000332858 RPS8P62241 208 aaKnown RBP15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 DHX8Q14562 1220 aaKnown RBP15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 TTC38Q5R3I4 469 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 KANK3Q6NY19 840 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 AMIGO3Q86WK7 504 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 CPLX3Q8WVH0 158 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 MTRQ99707 1265 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 IRX2Q9BZI1 471 aaPredicted RBP15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 THRAP3Q9Y2W1 955 aaKnown RBP15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 PARP3Q9Y6F1 533 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 SPATA31A5Q5VU36 1347 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 SPATA31A7Q8IWB4 1347 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 A0A1B0GUL6 1792 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 EP400Q96L91 3159 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 A0A1B0GTH6 734 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 PPP1R3GB7ZBB8 358 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 USP17L8P0C7I0 530 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 RCSD1Q6JBY9 416 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 ST7Q9NRC1 585 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 DACH1Q9UI36 760 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 PHLPP2Q6ZVD8 1323 aa15.28■□□□□ 0.04
TUBA1B-201ENST00000332858 ERCC5P28715 1186 aaPredicted RBP15.27■□□□□ 0.04
TUBA1B-201ENST00000332858 MCM7P33993 719 aa15.27■□□□□ 0.04
TUBA1B-201ENST00000332858 CARD6Q9BX69 1037 aa15.27■□□□□ 0.04
TUBA1B-201ENST00000332858 RBM28Q9NW13 759 aaKnown RBP15.27■□□□□ 0.04
TUBA1B-201ENST00000332858 SOWAHDA6NJG2 315 aa15.27■□□□□ 0.03
TUBA1B-201ENST00000332858 H2AFXP16104 143 aaPredicted RBP15.27■□□□□ 0.03
TUBA1B-201ENST00000332858 HIBADHP31937 336 aaKnown RBP15.27■□□□□ 0.03
TUBA1B-201ENST00000332858 ARHGAP29Q52LW3 1261 aa15.27■□□□□ 0.03
TUBA1B-201ENST00000332858 XDHP47989 1333 aa15.27■□□□□ 0.03
TUBA1B-201ENST00000332858 STX10O60499 249 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 FAM98CQ17RN3 349 aaKnown RBP15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 RASGRP4Q8TDF6 673 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 MRPL44Q9H9J2 332 aaKnown RBP15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 CASZ1Q86V15 1759 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 NLRP5P59047 1200 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 GNG11P61952 73 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 ATP2C1P98194 919 aaPredicted RBP15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 RBL2Q08999 1139 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 KARSQ15046 597 aaKnown RBP15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 CTCFLQ8NI51 663 aaPredicted RBP15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 GPKOWQ92917 476 aaPredicted RBP eCLIP15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 DDAH1O94760 285 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 SCG2P13521 617 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 CLCN6P51797 869 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 E2F4Q16254 413 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 SPATA1Q5VX52 437 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 STAG2Q8N3U4 1231 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 FERMT2Q96AC1 680 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 DYNLL2Q96FJ2 89 aa15.26■□□□□ 0.03
TUBA1B-201ENST00000332858 SCN7AQ01118 1682 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 FAM205AQ6ZU69 1335 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 SYNRGQ9UMZ2 1314 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 TSPY2A6NKD2 308 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 CCP110O43303 1012 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 ZSCAN12O43309 604 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 ORC4O43929 436 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 SLC10A5Q5PT55 438 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 TYW1BQ6NUM6 668 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 IL17RBQ9NRM6 502 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 MCM9Q9NXL9 1143 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 CALM1P0DP23 149 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 CALM2P0DP24 149 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 CALM3P0DP25 149 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 GRIK5Q16478 980 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 FCHSD1Q86WN1 690 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 SMARCC1Q92922 1105 aaPredicted RBP15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 CRNKL1Q9BZJ0 848 aaKnown RBP15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 ADD3Q9UEY8 706 aaKnown RBP15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 MAPK8IP1Q9UQF2 711 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 MTMR7Q9Y216 660 aa15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 COL22A1Q8NFW1 1626 aaPredicted RBP15.25■□□□□ 0.03
TUBA1B-201ENST00000332858 CDKAL1Q5VV42 579 aa15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 RAD9BQ6WBX8 426 aa15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 BRMS1Q9HCU9 246 aa15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 SLC35G1Q2M3R5 365 aa15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 FAM182BQ5T319 152 aa15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 NBPF5PQ86XG9 351 aaPredicted RBP15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 IGSF22Q8N9C0 903 aa15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 NLRP3Q96P20 1036 aa15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 GSDMAQ96QA5 445 aa15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 FAM53CQ9NYF3 392 aa15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 CTNND2Q9UQB3 1225 aa15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 RNF225M0QZC1 329 aaPredicted RBP15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 TUBB4AP04350 444 aa15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 CCT6AP40227 531 aaKnown RBP15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 PBX1P40424 430 aa15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 PFKFB3Q16875 520 aaPredicted RBP15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 UTP14CQ5TAP6 766 aaKnown RBP15.24■□□□□ 0.03
TUBA1B-201ENST00000332858 PDXDC2PQ6P474 469 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms