RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 MCCP23508 829 aa30.56■■■□□ 2.48
SMDT1-201ENST00000331479 KRT32Q14532 448 aa30.56■■■□□ 2.48
SMDT1-201ENST00000331479 NEK1Q96PY6 1258 aa30.56■■■□□ 2.48
SMDT1-201ENST00000331479 TNKSO95271 1327 aa30.55■■■□□ 2.48
SMDT1-201ENST00000331479 MAP2K1Q02750 393 aaPredicted RBP30.55■■■□□ 2.48
SMDT1-201ENST00000331479 ANKRD23Q86SG2 305 aa30.55■■■□□ 2.48
SMDT1-201ENST00000331479 SPICE1Q8N0Z3 855 aa30.55■■■□□ 2.48
SMDT1-201ENST00000331479 ENAHQ8N8S7 591 aaPredicted RBP30.55■■■□□ 2.48
SMDT1-201ENST00000331479 AGTPBP1Q9UPW5 1226 aa30.55■■■□□ 2.48
SMDT1-201ENST00000331479 VCAM1P19320 739 aa30.54■■■□□ 2.48
SMDT1-201ENST00000331479 PPP4R3BQ5MIZ7 849 aa30.54■■■□□ 2.48
SMDT1-201ENST00000331479 TTC14Q96N46 770 aa30.54■■■□□ 2.48
SMDT1-201ENST00000331479 TMEM47Q9BQJ4 181 aa30.54■■■□□ 2.48
SMDT1-201ENST00000331479 UBAC1Q9BSL1 405 aa30.54■■■□□ 2.48
SMDT1-201ENST00000331479 PDHXO00330 501 aa30.54■■■□□ 2.48
SMDT1-201ENST00000331479 DGKHQ86XP1 1220 aa30.54■■■□□ 2.48
SMDT1-201ENST00000331479 WBP1LQ9NX94 342 aa30.54■■■□□ 2.48
SMDT1-201ENST00000331479 F5H6K3 240 aa30.53■■■□□ 2.48
SMDT1-201ENST00000331479 RAD21O60216 631 aa30.53■■■□□ 2.48
SMDT1-201ENST00000331479 KLRC3Q07444 240 aa30.53■■■□□ 2.48
SMDT1-201ENST00000331479 SEC23AQ15436 765 aa30.53■■■□□ 2.48
SMDT1-201ENST00000331479 JAKMIP1Q96N16 626 aaKnown RBP30.53■■■□□ 2.48
SMDT1-201ENST00000331479 GOPCQ9HD26 462 aa30.53■■■□□ 2.48
SMDT1-201ENST00000331479 RNF186Q9NXI6 227 aa30.53■■■□□ 2.48
SMDT1-201ENST00000331479 PRC1O43663 620 aa30.52■■■□□ 2.48
SMDT1-201ENST00000331479 TOP1P11387 765 aaKnown RBP30.52■■■□□ 2.48
SMDT1-201ENST00000331479 MCM5P33992 734 aa30.52■■■□□ 2.48
SMDT1-201ENST00000331479 OTUD7BQ6GQQ9 843 aa30.52■■■□□ 2.48
SMDT1-201ENST00000331479 ANKS1AQ92625 1134 aa30.52■■■□□ 2.48
SMDT1-201ENST00000331479 SYNPO2Q9UMS6 1093 aa30.52■■■□□ 2.48
SMDT1-201ENST00000331479 IFIT3O14879 490 aaKnown RBP30.51■■■□□ 2.47
SMDT1-201ENST00000331479 NDUFB10O96000 172 aa30.51■■■□□ 2.47
SMDT1-201ENST00000331479 CPA1P15085 419 aa30.51■■■□□ 2.47
SMDT1-201ENST00000331479 CCDC178Q5BJE1 867 aa30.51■■■□□ 2.47
SMDT1-201ENST00000331479 LPAR1Q92633 364 aa30.51■■■□□ 2.47
SMDT1-201ENST00000331479 GPHNQ9NQX3 736 aaPredicted RBP30.51■■■□□ 2.47
SMDT1-201ENST00000331479 TRPA1O75762 1119 aa30.5■■■□□ 2.47
SMDT1-201ENST00000331479 GMCL1P1Q8NEA9 526 aa30.5■■■□□ 2.47
SMDT1-201ENST00000331479 IGDCC4Q8TDY8 1250 aa30.5■■■□□ 2.47
SMDT1-201ENST00000331479 CHMP4CQ96CF2 233 aa30.5■■■□□ 2.47
SMDT1-201ENST00000331479 SENP2Q9HC62 589 aa30.5■■■□□ 2.47
SMDT1-201ENST00000331479 RASGRP2Q7LDG7 609 aa30.49■■■□□ 2.47
SMDT1-201ENST00000331479 TCEANC2Q96MN5 208 aa30.49■■■□□ 2.47
SMDT1-201ENST00000331479 NUP88Q99567 741 aaPredicted RBP30.49■■■□□ 2.47
SMDT1-201ENST00000331479 LRRC2Q9BYS8 371 aa30.49■■■□□ 2.47
SMDT1-201ENST00000331479 RPAP3Q9H6T3 665 aaPredicted RBP30.49■■■□□ 2.47
SMDT1-201ENST00000331479 ZCCHC17Q9NP64 241 aaKnown RBP30.49■■■□□ 2.47
SMDT1-201ENST00000331479 SLC45A1Q9Y2W3 748 aa30.49■■■□□ 2.47
SMDT1-201ENST00000331479 HOXA7P31268 230 aaPredicted RBP30.49■■■□□ 2.47
SMDT1-201ENST00000331479 EXOSC10Q01780 885 aaKnown RBP30.49■■■□□ 2.47
SMDT1-201ENST00000331479 SLFN13Q68D06 897 aa30.49■■■□□ 2.47
SMDT1-201ENST00000331479 DHX32Q7L7V1 743 aaKnown RBP30.49■■■□□ 2.47
SMDT1-201ENST00000331479 BACH2Q9BYV9 841 aa30.49■■■□□ 2.47
SMDT1-201ENST00000331479 MTMR7Q9Y216 660 aa30.49■■■□□ 2.47
SMDT1-201ENST00000331479 ALDH1A1P00352 501 aa30.48■■■□□ 2.47
SMDT1-201ENST00000331479 CYP2C8P10632 490 aa30.48■■■□□ 2.47
SMDT1-201ENST00000331479 TMEM67Q5HYA8 995 aa30.48■■■□□ 2.47
SMDT1-201ENST00000331479 IFIT1BQ5T764 474 aaKnown RBP30.48■■■□□ 2.47
SMDT1-201ENST00000331479 R3HDMLQ9H3Y0 253 aa30.48■■■□□ 2.47
SMDT1-201ENST00000331479 SART3Q15020 963 aaKnown RBP30.47■■■□□ 2.47
SMDT1-201ENST00000331479 TAF1CQ15572 869 aaPredicted RBP30.47■■■□□ 2.47
SMDT1-201ENST00000331479 FAM83BQ5T0W9 1011 aa30.47■■■□□ 2.47
SMDT1-201ENST00000331479 ASCC2Q9H1I8 757 aaPredicted RBP30.47■■■□□ 2.47
SMDT1-201ENST00000331479 ERICH2A1L162 156 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 USP17L15C9J2P7 530 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 USP17L13C9JLJ4 530 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 USP17L11C9JVI0 530 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 USP17L18D6R9N7 530 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 USP17L22D6RA61 530 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 USP17L17D6RBQ6 530 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 USP17L19D6RCP7 530 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 USP17L20D6RJB6 530 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 WDR46O15213 610 aaKnown RBP30.46■■■□□ 2.47
SMDT1-201ENST00000331479 TBC1D8O95759 1140 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 HMGB1P09429 215 aaKnown RBP30.46■■■□□ 2.47
SMDT1-201ENST00000331479 CASTP20810 708 aaKnown RBP30.46■■■□□ 2.47
SMDT1-201ENST00000331479 USP17L24Q0WX57 530 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 CRHR2Q13324 411 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 WTAPQ15007 396 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 BLOC1S2Q6QNY1 142 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 CATSPERGQ6ZRH7 1159 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 BEGAINQ9BUH8 593 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 KAT14Q9H8E8 782 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 LY9Q9HBG7 655 aa30.46■■■□□ 2.47
SMDT1-201ENST00000331479 SH2B2O14492 632 aaPredicted RBP30.45■■■□□ 2.47
SMDT1-201ENST00000331479 CA12O43570 354 aa30.45■■■□□ 2.47
SMDT1-201ENST00000331479 PSMA5P28066 241 aa30.45■■■□□ 2.47
SMDT1-201ENST00000331479 ANAPC15P60006 121 aa30.45■■■□□ 2.47
SMDT1-201ENST00000331479 PABPC4Q13310 644 aaKnown RBP eCLIP30.45■■■□□ 2.476e-7■■□□□ 13.6
SMDT1-201ENST00000331479 PNMA1Q8ND90 353 aa30.45■■■□□ 2.47
SMDT1-201ENST00000331479 TMEM87BQ96K49 555 aa30.45■■■□□ 2.47
SMDT1-201ENST00000331479 MTA3Q9BTC8 594 aa30.45■■■□□ 2.47
SMDT1-201ENST00000331479 TANGO6Q9C0B7 1094 aa30.45■■■□□ 2.46
SMDT1-201ENST00000331479 TSKSQ9UJT2 592 aa30.45■■■□□ 2.46
SMDT1-201ENST00000331479 RPS6KB1P23443 525 aa30.44■■■□□ 2.46
SMDT1-201ENST00000331479 GMCL1Q96IK5 515 aa30.44■■■□□ 2.46
SMDT1-201ENST00000331479 P2RX7Q99572 595 aaKnown RBP30.44■■■□□ 2.46
SMDT1-201ENST00000331479 ZSWIM6Q9HCJ5 1215 aa30.44■■■□□ 2.46
SMDT1-201ENST00000331479 SAGE1Q9NXZ1 904 aa30.44■■■□□ 2.46
SMDT1-201ENST00000331479 WDR19Q8NEZ3 1342 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms