RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 CCDC43Q96MW1 224 aaKnown RBP23.08■■□□□ 1.29
CMTM4-201ENST00000330687 SLC12A7Q9Y666 1083 aa23.08■■□□□ 1.29
CMTM4-201ENST00000330687 GRIN2DO15399 1336 aa23.08■■□□□ 1.29
CMTM4-201ENST00000330687 PLEKHG3A1L390 1219 aa23.08■■□□□ 1.29
CMTM4-201ENST00000330687 TRIM21P19474 475 aaKnown RBP23.08■■□□□ 1.29
CMTM4-201ENST00000330687 HDLBPQ00341 1268 aaKnown RBP23.08■■□□□ 1.29
CMTM4-201ENST00000330687 ODF2Q5BJF6 829 aa23.08■■□□□ 1.29
CMTM4-201ENST00000330687 CCDC121Q6ZUS5 278 aa23.08■■□□□ 1.29
CMTM4-201ENST00000330687 MICALCLQ6ZW33 695 aa23.08■■□□□ 1.29
CMTM4-201ENST00000330687 OXER1Q8TDS5 423 aa23.08■■□□□ 1.29
CMTM4-201ENST00000330687 ZNF526Q8TF50 670 aaPredicted RBP23.08■■□□□ 1.29
CMTM4-201ENST00000330687 JCADQ9P266 1359 aa23.08■■□□□ 1.29
CMTM4-201ENST00000330687 GPAA1O43292 621 aa23.08■■□□□ 1.28
CMTM4-201ENST00000330687 COPB1P53618 953 aaKnown RBP23.08■■□□□ 1.28
CMTM4-201ENST00000330687 RNPC3Q96LT9 517 aaKnown RBP23.08■■□□□ 1.28
CMTM4-201ENST00000330687 PUS3Q9BZE2 481 aaKnown RBP23.08■■□□□ 1.28
CMTM4-201ENST00000330687 REXO2Q9Y3B8 237 aaKnown RBP23.07■■□□□ 1.28
CMTM4-201ENST00000330687 EIF4E1BA6NMX2 242 aaKnown RBP23.07■■□□□ 1.28
CMTM4-201ENST00000330687 RNMTO43148 476 aaKnown RBP23.07■■□□□ 1.28
CMTM4-201ENST00000330687 TTMPQ5BVD1 217 aa23.07■■□□□ 1.28
CMTM4-201ENST00000330687 CFAP58Q5T655 872 aa23.07■■□□□ 1.28
CMTM4-201ENST00000330687 ERCC5P28715 1186 aaPredicted RBP23.07■■□□□ 1.28
CMTM4-201ENST00000330687 DPYDQ12882 1025 aa23.07■■□□□ 1.28
CMTM4-201ENST00000330687 KRT26Q7Z3Y9 468 aa23.07■■□□□ 1.28
CMTM4-201ENST00000330687 ADORA1P30542 326 aa23.06■■□□□ 1.28
CMTM4-201ENST00000330687 TTF1Q15361 905 aaPredicted RBP23.06■■□□□ 1.28
CMTM4-201ENST00000330687 MIEF2Q96C03 454 aa23.06■■□□□ 1.28
CMTM4-201ENST00000330687 HAUS4Q9H6D7 363 aa23.06■■□□□ 1.28
CMTM4-201ENST00000330687 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.06■■□□□ 1.28
CMTM4-201ENST00000330687 PALLDQ8WX93 1383 aa23.06■■□□□ 1.28
CMTM4-201ENST00000330687 KCNJ18B7U540 433 aa23.06■■□□□ 1.28
CMTM4-201ENST00000330687 GOLGA8KD6RF30 607 aa23.06■■□□□ 1.28
CMTM4-201ENST00000330687 RANBP6O60518 1105 aaKnown RBP23.06■■□□□ 1.28
CMTM4-201ENST00000330687 TOB1P50616 345 aaPredicted RBP23.06■■□□□ 1.28
CMTM4-201ENST00000330687 KCNJ12Q14500 433 aa23.06■■□□□ 1.28
CMTM4-201ENST00000330687 NAA35Q5VZE5 725 aa23.06■■□□□ 1.28
CMTM4-201ENST00000330687 MSL3Q8N5Y2 521 aaKnown RBP23.06■■□□□ 1.28
CMTM4-201ENST00000330687 PLIN2Q99541 437 aa23.06■■□□□ 1.28
CMTM4-201ENST00000330687 UBAC1Q9BSL1 405 aa23.06■■□□□ 1.28
CMTM4-201ENST00000330687 ZNHIT6Q9NWK9 470 aaKnown RBP23.06■■□□□ 1.28
CMTM4-201ENST00000330687 SETD1AO15047 1707 aaKnown RBP23.06■■□□□ 1.28
CMTM4-201ENST00000330687 ZC3H4Q9UPT8 1303 aaKnown RBP23.05■■□□□ 1.28
CMTM4-201ENST00000330687 EZRP15311 586 aaKnown RBP23.05■■□□□ 1.28
CMTM4-201ENST00000330687 ZNF174Q15697 407 aa23.05■■□□□ 1.28
CMTM4-201ENST00000330687 CCDC13Q8IYE1 715 aa23.05■■□□□ 1.28
CMTM4-201ENST00000330687 OR8K1Q8NGG5 319 aa23.05■■□□□ 1.28
CMTM4-201ENST00000330687 FBXO2Q9UK22 296 aaPredicted RBP23.05■■□□□ 1.28
CMTM4-201ENST00000330687 TRIM49BA6NDI0 452 aa23.05■■□□□ 1.28
CMTM4-201ENST00000330687 SHOX2O60902 331 aaPredicted RBP23.05■■□□□ 1.28
CMTM4-201ENST00000330687 CDC25CP30307 473 aa23.05■■□□□ 1.28
CMTM4-201ENST00000330687 TRIM22Q8IYM9 498 aa23.05■■□□□ 1.28
CMTM4-201ENST00000330687 BAIAP2L1Q9UHR4 511 aa23.05■■□□□ 1.28
CMTM4-201ENST00000330687 UBN2Q6ZU65 1347 aa23.05■■□□□ 1.28
CMTM4-201ENST00000330687 ZSCAN5CA6NGD5 496 aaPredicted RBP23.05■■□□□ 1.28
CMTM4-201ENST00000330687 APTXQ7Z2E3 356 aaKnown RBP23.05■■□□□ 1.28
CMTM4-201ENST00000330687 PEAK1Q9H792 1746 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 FAM208AQ9UK61 1670 aaKnown RBP23.04■■□□□ 1.28
CMTM4-201ENST00000330687 A0A087X0B3 334 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 PTPREP23469 700 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 LSP1P33241 339 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 ZAP70P43403 619 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 SYMPKQ92797 1274 aaKnown RBP23.04■■□□□ 1.28
CMTM4-201ENST00000330687 ZIM3Q96PE6 472 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 SLC40A1Q9NP59 571 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 HAUS2Q9NVX0 235 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 MYO1AQ9UBC5 1043 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 RCCD1A6NED2 376 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 IQCEQ6IPM2 695 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 ABCC6O95255 1503 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 NCK2O43639 380 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 ACTN4O43707 911 aaKnown RBP23.04■■□□□ 1.28
CMTM4-201ENST00000330687 KIF5AQ12840 1032 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 KANK3Q6NY19 840 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 METTL22Q9BUU2 404 aaPredicted RBP23.04■■□□□ 1.28
CMTM4-201ENST00000330687 CEP126Q9P2H0 1117 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 NFU1Q9UMS0 254 aa23.04■■□□□ 1.28
CMTM4-201ENST00000330687 NFRKBQ6P4R8 1299 aa23.03■■□□□ 1.28
CMTM4-201ENST00000330687 TBC1D10CQ8IV04 446 aa23.03■■□□□ 1.28
CMTM4-201ENST00000330687 ZNF473Q8WTR7 871 aaKnown RBP23.03■■□□□ 1.28
CMTM4-201ENST00000330687 NELFBQ8WX92 580 aa23.03■■□□□ 1.28
CMTM4-201ENST00000330687 CCDC51Q96ER9 411 aa23.03■■□□□ 1.28
CMTM4-201ENST00000330687 CARD10Q9BWT7 1032 aa23.03■■□□□ 1.28
CMTM4-201ENST00000330687 RFX5P48382 616 aaPredicted RBP23.03■■□□□ 1.28
CMTM4-201ENST00000330687 HLTFQ14527 1009 aaKnown RBP eCLIP23.03■■□□□ 1.28
CMTM4-201ENST00000330687 AKAP4Q5JQC9 854 aa23.03■■□□□ 1.28
CMTM4-201ENST00000330687 PAGE5Q96GU1 130 aa23.03■■□□□ 1.28
CMTM4-201ENST00000330687 SCARF1Q14162 830 aa23.02■■□□□ 1.28
CMTM4-201ENST00000330687 SNCBQ16143 134 aa23.02■■□□□ 1.28
CMTM4-201ENST00000330687 ENOX2Q16206 610 aaKnown RBP23.02■■□□□ 1.28
CMTM4-201ENST00000330687 C8orf74Q6P047 294 aa23.02■■□□□ 1.28
CMTM4-201ENST00000330687 MLXIPQ9HAP2 919 aa23.02■■□□□ 1.28
CMTM4-201ENST00000330687 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.02■■□□□ 1.28
CMTM4-201ENST00000330687 GDAQ9Y2T3 454 aa23.02■■□□□ 1.28
CMTM4-201ENST00000330687 CHD2O14647 1828 aaKnown RBP23.02■■□□□ 1.28
CMTM4-201ENST00000330687 GCKP35557 465 aa23.02■■□□□ 1.28
CMTM4-201ENST00000330687 HERVK_113P62684 666 aa23.02■■□□□ 1.28
CMTM4-201ENST00000330687 PTPROQ16827 1216 aa23.02■■□□□ 1.28
CMTM4-201ENST00000330687 PROSER2Q86WR7 435 aaPredicted RBP23.02■■□□□ 1.28
CMTM4-201ENST00000330687 CCT8L2Q96SF2 557 aa23.02■■□□□ 1.28
CMTM4-201ENST00000330687 CTDSPL2Q05D32 466 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms