RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 TSC22D3Q99576 134 aa13.29□□□□□ -0.28
SHMT2-201ENST00000328923 AXIN2Q9Y2T1 843 aa13.29□□□□□ -0.28
SHMT2-201ENST00000328923 CEMIPQ8WUJ3 1361 aa13.29□□□□□ -0.28
SHMT2-201ENST00000328923 CAMTA1Q9Y6Y1 1673 aa13.29□□□□□ -0.28
SHMT2-201ENST00000328923 FERP16591 822 aa13.29□□□□□ -0.28
SHMT2-201ENST00000328923 ZRSR2Q15696 482 aaKnown RBP13.29□□□□□ -0.28
SHMT2-201ENST00000328923 BRAPQ7Z569 592 aa13.29□□□□□ -0.28
SHMT2-201ENST00000328923 FSIP1Q8NA03 581 aa13.29□□□□□ -0.28
SHMT2-201ENST00000328923 ANKRD24Q8TF21 1146 aa13.29□□□□□ -0.28
SHMT2-201ENST00000328923 CDC5LQ99459 802 aaKnown RBP13.29□□□□□ -0.28
SHMT2-201ENST00000328923 GORASP1Q9BQQ3 440 aa13.29□□□□□ -0.28
SHMT2-201ENST00000328923 SDF4Q9BRK5 362 aa13.29□□□□□ -0.28
SHMT2-201ENST00000328923 SELENOOQ9BVL4 669 aa13.29□□□□□ -0.28
SHMT2-201ENST00000328923 TRIM4Q9C037 500 aa13.29□□□□□ -0.28
SHMT2-201ENST00000328923 NOD2Q9HC29 1040 aa13.29□□□□□ -0.28
SHMT2-201ENST00000328923 LMO7Q8WWI1 1683 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 TNS3Q68CZ2 1445 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 CTAGE9A4FU28 777 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 EIF4E1BA6NMX2 242 aaKnown RBP13.28□□□□□ -0.28
SHMT2-201ENST00000328923 KIF5CO60282 957 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 STX10O60499 249 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 ATP6V1G2O95670 118 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 HOXB7P09629 217 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 SKOR1P84550 965 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 COL9A3Q14050 684 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-201ENST00000328923 DBN1Q16643 649 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 LRRC23Q53EV4 343 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-201ENST00000328923 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 USPL1Q5W0Q7 1092 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 CCDC148Q8NFR7 591 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 ATL2Q8NHH9 583 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 BAIAP2L1Q9UHR4 511 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 MGRN1O60291 552 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 ATP6V1G1O75348 118 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 ANP32DO95626 131 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 NBPF7P0C2Y1 421 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-201ENST00000328923 DRP2Q13474 957 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 HDGFL1Q5TGJ6 251 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 MEX3CQ5U5Q3 659 aaKnown RBP13.28□□□□□ -0.28
SHMT2-201ENST00000328923 MTHFD1LQ6UB35 978 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 CCDC121Q6ZUS5 278 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 ARL10Q8N8L6 244 aa13.28□□□□□ -0.28
SHMT2-201ENST00000328923 ACTR5Q9H9F9 607 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-201ENST00000328923 B4DLN1 442 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 SLC35F6Q8N357 371 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 TC2NQ8N9U0 490 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 FAM227BQ96M60 508 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.295e-8■■■□□ 18.8
SHMT2-201ENST00000328923 PHACTR1Q9C0D0 580 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 DNAAF2Q9NVR5 837 aaKnown RBP13.27□□□□□ -0.29
SHMT2-201ENST00000328923 JAK2O60674 1132 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 SMIM24O75264 130 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 LSP1P33241 339 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 SEC24CP53992 1094 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 USP14P54578 494 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 WHAMMP3Q1A5X7 153 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 TTMPQ5BVD1 217 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 C6orf89Q6UWU4 347 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 ARL8AQ96BM9 186 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 EPN3Q9H201 632 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 INTS13Q9NVM9 706 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 KIAA1468Q9P260 1216 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 L3MBTL1Q9Y468 752 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 U3KPZ7 1027 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-201ENST00000328923 SOS2Q07890 1332 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-201ENST00000328923 SPATA31A6Q5VVP1 1343 aa13.27□□□□□ -0.29
SHMT2-201ENST00000328923 RFX7Q2KHR2 1363 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 A0A1W2PQ27 194 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 A0A1W2PQ64 194 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 A0A1W2PQD8 194 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 SOWAHDA6NJG2 315 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 CBFA2T2O43439 604 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 CCDC175P0C221 793 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 ATP4AP20648 1035 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 ZC3H6P61129 1189 aaKnown RBP13.26□□□□□ -0.29
SHMT2-201ENST00000328923 IFFO1Q0D2I5 559 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 ACBD5Q5T8D3 534 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-201ENST00000328923 SH2D3CQ8N5H7 860 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 CUL5Q93034 780 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 OSBPL7Q9BZF2 842 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 PIDD1Q9HB75 910 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 LGR6Q9HBX8 967 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.26□□□□□ -0.293e-6■■■■■ 44
SHMT2-201ENST00000328923 A6NHS1 94 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 GOLGA8KD6RF30 607 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 MAP3K13O43283 966 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 ATP2C2O75185 946 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 CTCFP49711 727 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-201ENST00000328923 GUCY1A3Q02108 690 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 STK3Q13188 491 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 TUBB2AQ13885 445 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 RASA3Q14644 834 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 AKAP4Q5JQC9 854 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 PPP1R15BQ5SWA1 713 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 FMR1NBQ8N0W7 255 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-201ENST00000328923 TCEANC2Q96MN5 208 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 CCT8L2Q96SF2 557 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 TUBB2BQ9BVA1 445 aa13.26□□□□□ -0.29
SHMT2-201ENST00000328923 MAPK8IP1Q9UQF2 711 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms