RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 VCPKMTQ9H867 229 aa18.33■□□□□ 0.52
TSFM-201ENST00000323833 NYAP2Q9P242 653 aa18.33■□□□□ 0.52
TSFM-201ENST00000323833 TSPY2A6NKD2 308 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 USP17L15C9J2P7 530 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 USP17L13C9JLJ4 530 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 USP17L11C9JVI0 530 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 USP17L18D6R9N7 530 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 USP17L22D6RA61 530 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 USP17L17D6RBQ6 530 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 USP17L19D6RCP7 530 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 USP17L20D6RJB6 530 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 LACTBP83111 547 aaPredicted RBP18.32■□□□□ 0.52
TSFM-201ENST00000323833 USP17L24Q0WX57 530 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 AKNAD1Q5T1N1 836 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 CATSPERGQ6ZRH7 1159 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 SPICE1Q8N0Z3 855 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 ANKRD13CQ8N6S4 541 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 NKX2-3Q8TAU0 364 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 MTMR4Q9NYA4 1195 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 CLIP2Q9UDT6 1046 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 TRIM17Q9Y577 477 aa18.32■□□□□ 0.52
TSFM-201ENST00000323833 RAD21O60216 631 aa18.31■□□□□ 0.52
TSFM-201ENST00000323833 NMT2O60551 498 aa18.31■□□□□ 0.52
TSFM-201ENST00000323833 PEX10O60683 326 aa18.31■□□□□ 0.52
TSFM-201ENST00000323833 CTGFP29279 349 aa18.31■□□□□ 0.52
TSFM-201ENST00000323833 HERVK_113P62684 666 aa18.31■□□□□ 0.52
TSFM-201ENST00000323833 IMMTQ16891 758 aaKnown RBP18.31■□□□□ 0.52
TSFM-201ENST00000323833 MFSD6Q6ZSS7 791 aa18.31■□□□□ 0.52
TSFM-201ENST00000323833 OTOP1Q7RTM1 612 aa18.31■□□□□ 0.52
TSFM-201ENST00000323833 STAG1Q8WVM7 1258 aa18.31■□□□□ 0.52
TSFM-201ENST00000323833 ESYT1Q9BSJ8 1104 aa18.31■□□□□ 0.52
TSFM-201ENST00000323833 IL17RBQ9NRM6 502 aa18.31■□□□□ 0.52
TSFM-201ENST00000323833 CTNNA3Q9UI47 895 aa18.31■□□□□ 0.52
TSFM-201ENST00000323833 NEDD4P46934 1319 aa18.3■□□□□ 0.52
TSFM-201ENST00000323833 A0A0G2JMZ2 1700 aa18.3■□□□□ 0.52
TSFM-201ENST00000323833 GCLCP48506 637 aaPredicted RBP18.3■□□□□ 0.52
TSFM-201ENST00000323833 KIF22Q14807 665 aa18.3■□□□□ 0.52
TSFM-201ENST00000323833 LPAR1Q92633 364 aa18.3■□□□□ 0.52
TSFM-201ENST00000323833 EFCC1Q9HA90 598 aa18.3■□□□□ 0.52
TSFM-201ENST00000323833 GOPCQ9HD26 462 aa18.3■□□□□ 0.52
TSFM-201ENST00000323833 TTLL1O95922 423 aa18.29■□□□□ 0.52
TSFM-201ENST00000323833 POTEEQ6S8J3 1075 aa18.29■□□□□ 0.52
TSFM-201ENST00000323833 LRRC47Q8N1G4 583 aaKnown RBP18.29■□□□□ 0.52
TSFM-201ENST00000323833 TANGO6Q9C0B7 1094 aa18.29■□□□□ 0.52
TSFM-201ENST00000323833 RNF41Q9H4P4 317 aaPredicted RBP18.29■□□□□ 0.52
TSFM-201ENST00000323833 PLXNB2O15031 1838 aa18.28■□□□□ 0.52
TSFM-201ENST00000323833 F5H6K3 240 aa18.28■□□□□ 0.52
TSFM-201ENST00000323833 WDR46O15213 610 aaKnown RBP18.28■□□□□ 0.52
TSFM-201ENST00000323833 CDC45O75419 566 aa18.28■□□□□ 0.52
TSFM-201ENST00000323833 PSMC4P43686 418 aa18.28■□□□□ 0.52
TSFM-201ENST00000323833 KLRC3Q07444 240 aa18.28■□□□□ 0.52
TSFM-201ENST00000323833 FAM110CQ1W6H9 321 aa18.28■□□□□ 0.52
TSFM-201ENST00000323833 MKL1Q969V6 931 aa18.28■□□□□ 0.52
TSFM-201ENST00000323833 TRIM47Q96LD4 638 aa18.28■□□□□ 0.52
TSFM-201ENST00000323833 TXNRD2Q9NNW7 524 aa18.28■□□□□ 0.52
TSFM-201ENST00000323833 RBPJLQ9UBG7 517 aa18.28■□□□□ 0.52
TSFM-201ENST00000323833 U3KPZ7 1027 aaPredicted RBP18.28■□□□□ 0.52
TSFM-201ENST00000323833 FMNL1O95466 1100 aaPredicted RBP18.27■□□□□ 0.52
TSFM-201ENST00000323833 PCP11498 1178 aaKnown RBP18.27■□□□□ 0.52
TSFM-201ENST00000323833 FAM83BQ5T0W9 1011 aa18.27■□□□□ 0.52
TSFM-201ENST00000323833 KIAA1211Q6ZU35 1233 aa18.27■□□□□ 0.52
TSFM-201ENST00000323833 MAP4K1Q92918 833 aa18.27■□□□□ 0.52
TSFM-201ENST00000323833 NUP88Q99567 741 aaPredicted RBP18.27■□□□□ 0.52
TSFM-201ENST00000323833 PAGR1Q9BTK6 254 aa18.27■□□□□ 0.52
TSFM-201ENST00000323833 LSG1Q9H089 658 aaKnown RBP18.27■□□□□ 0.52
TSFM-201ENST00000323833 MORF4L1Q9UBU8 362 aa18.27■□□□□ 0.52
TSFM-201ENST00000323833 STX8Q9UNK0 236 aa18.27■□□□□ 0.52
TSFM-201ENST00000323833 ZNFX1Q9P2E3 1918 aaKnown RBP18.27■□□□□ 0.51
TSFM-201ENST00000323833 SPDYE16A6NNV3 312 aaPredicted RBP18.26■□□□□ 0.51
TSFM-201ENST00000323833 B4E1Z4 1266 aa18.26■□□□□ 0.51
TSFM-201ENST00000323833 NDUFB10O96000 172 aa18.26■□□□□ 0.51
TSFM-201ENST00000323833 CYP21A2P08686 494 aa18.26■□□□□ 0.51
TSFM-201ENST00000323833 COG2Q14746 738 aa18.26■□□□□ 0.51
TSFM-201ENST00000323833 ARHGEF6Q15052 776 aa18.26■□□□□ 0.51
TSFM-201ENST00000323833 PKN2Q16513 984 aaKnown RBP18.26■□□□□ 0.51
TSFM-201ENST00000323833 Q3C1V9 767 aa18.26■□□□□ 0.51
TSFM-201ENST00000323833 SAMD1Q6SPF0 538 aaPredicted RBP18.26■□□□□ 0.51
TSFM-201ENST00000323833 ESR2Q92731 530 aa18.26■□□□□ 0.51
TSFM-201ENST00000323833 CHMP4CQ96CF2 233 aa18.26■□□□□ 0.51
TSFM-201ENST00000323833 PTPN22Q9Y2R2 807 aa18.26■□□□□ 0.51
TSFM-201ENST00000323833 RBM8AQ9Y5S9 174 aaKnown RBP18.26■□□□□ 0.51
TSFM-201ENST00000323833 KDM4AO75164 1064 aa18.25■□□□□ 0.51
TSFM-201ENST00000323833 CNMDO75829 334 aa18.25■□□□□ 0.51
TSFM-201ENST00000323833 FLOT1O75955 427 aa18.25■□□□□ 0.51
TSFM-201ENST00000323833 FCGRTP55899 365 aa18.25■□□□□ 0.51
TSFM-201ENST00000323833 FBXO46Q6PJ61 603 aaPredicted RBP18.25■□□□□ 0.51
TSFM-201ENST00000323833 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
TSFM-201ENST00000323833 GPRC5AQ8NFJ5 357 aa18.25■□□□□ 0.51
TSFM-201ENST00000323833 GTF3C2Q8WUA4 911 aaPredicted RBP18.25■□□□□ 0.51
TSFM-201ENST00000323833 ABHD8Q96I13 439 aa18.25■□□□□ 0.51
TSFM-201ENST00000323833 ZKSCAN3Q9BRR0 538 aa18.25■□□□□ 0.51
TSFM-201ENST00000323833 ANO2Q9NQ90 1003 aa18.25■□□□□ 0.51
TSFM-201ENST00000323833 TCP11L1Q9NUJ3 509 aa18.25■□□□□ 0.51
TSFM-201ENST00000323833 FBXO28Q9NVF7 368 aa18.25■□□□□ 0.51
TSFM-201ENST00000323833 TAF6LQ9Y6J9 622 aa18.25■□□□□ 0.51
TSFM-201ENST00000323833 DSG3P32926 999 aa18.24■□□□□ 0.51
TSFM-201ENST00000323833 NOVP48745 357 aa18.24■□□□□ 0.51
TSFM-201ENST00000323833 ERVK-9P63128 1117 aa18.24■□□□□ 0.51
TSFM-201ENST00000323833 ERVK-24P63145 666 aa18.24■□□□□ 0.51
TSFM-201ENST00000323833 PPP4R3BQ5MIZ7 849 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 227.4 ms