RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 RWDD2BP57060 319 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 ARHGAP44Q17R89 818 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 TRIML1Q8N9V2 468 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 GINS4Q9BRT9 223 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 SLC4A4Q9Y6R1 1079 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 NBPF20Q3BBV1 942 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 SV2BQ7L1I2 683 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 WDR7Q9Y4E6 1490 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 NLRP7Q8WX94 980 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 CCDC51Q96ER9 411 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 CCDC138Q96M89 665 aa10.7□□□□□ -0.7
COL12A1-201ENST00000322507 CACYBPQ9HB71 228 aaKnown RBP10.7□□□□□ -0.7
COL12A1-201ENST00000322507 DACT1Q9NYF0 836 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 DEXIO95424 95 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 TEKT1Q969V4 418 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 ZNF830Q96NB3 372 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-201ENST00000322507 RRP15Q9Y3B9 282 aaKnown RBP10.69□□□□□ -0.7
COL12A1-201ENST00000322507 NPATQ14207 1427 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 RNF113AO15541 343 aaKnown RBP10.69□□□□□ -0.7
COL12A1-201ENST00000322507 TRIM37O94972 964 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 ARHGAP42A6NI28 874 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 SLC44A4Q53GD3 710 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 CEP19Q96LK0 163 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 TCOF1Q13428 1488 aaKnown RBP10.69□□□□□ -0.7
COL12A1-201ENST00000322507 MPNDQ8N594 471 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 KCTD17Q8N5Z5 321 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 EEF2P13639 858 aaKnown RBP10.69□□□□□ -0.7
COL12A1-201ENST00000322507 PSMD2Q13200 908 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 ATAD3BQ5T9A4 648 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 CCDC85AQ96PX6 553 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-201ENST00000322507 RAPGEF3O95398 923 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 POLE2P56282 527 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 TTC6Q86TZ1 520 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 NME9Q86XW9 330 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 TMTC1Q8IUR5 882 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 MLKLQ8NB16 471 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 YWHAEP62258 255 aaKnown RBP10.69□□□□□ -0.7
COL12A1-201ENST00000322507 RMI1Q9H9A7 625 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 CCT6BQ92526 530 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 SECISBP2LQ93073 1101 aaKnown RBP10.69□□□□□ -0.7
COL12A1-201ENST00000322507 A0A087WUV0 522 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-201ENST00000322507 KIF11P52732 1056 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 CALR3Q96L12 384 aaKnown RBP10.69□□□□□ -0.7
COL12A1-201ENST00000322507 TFIP11Q9UBB9 837 aaKnown RBP10.69□□□□□ -0.7
COL12A1-201ENST00000322507 DKK3Q9UBP4 350 aa10.69□□□□□ -0.7
COL12A1-201ENST00000322507 BCRP11274 1271 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 P3H4Q92791 437 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 CASP10Q92851 521 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 GIMAP6Q6P9H5 292 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 MAP3K7O43318 606 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 CYP7A1P22680 504 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 HORMAD1Q86X24 394 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 AOPEPQ8N6M6 819 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 RAB17Q9H0T7 212 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 HSPA1LP34931 641 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 PCDH11XQ9BZA7 1347 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 PCDH11YQ9BZA8 1340 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 CUL3Q13618 768 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 TPTE2Q6XPS3 522 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 NAPGQ99747 312 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-201ENST00000322507 ACTR5Q9H9F9 607 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-201ENST00000322507 PLCB3Q01970 1234 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 SLC9C1Q4G0N8 1177 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 ZNF710Q8N1W2 664 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 KCNK9Q9NPC2 374 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 PDZD8Q8NEN9 1154 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 SPC25Q9HBM1 224 aa10.68□□□□□ -0.7
COL12A1-201ENST00000322507 NUTM2BA6NNL0 878 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-201ENST00000322507 NUTM2EB1AL46 878 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-201ENST00000322507 ARL1P40616 181 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-201ENST00000322507 HDAC4P56524 1084 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 SLC9C2Q5TAH2 1124 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 DENND2AQ9ULE3 1009 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 CLASP1Q7Z460 1538 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 ARHGAP6O43182 974 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 RNF40O75150 1001 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 AFMP43652 599 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 CARSP49589 748 aaKnown RBP10.67□□□□□ -0.7
COL12A1-201ENST00000322507 NT5C2P49902 561 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 PPP2R3AQ06190 1150 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 PLCH2O75038 1416 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 ABCD1P33897 745 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 CNGA2Q16280 664 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 JPH2Q9BR39 696 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-201ENST00000322507 SMARCAD1Q9H4L7 1026 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 TRAF5O00463 557 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 C8orf74Q6P047 294 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 TPCN1Q9ULQ1 816 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 CNPY2Q9Y2B0 182 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 PARP1P09874 1014 aaKnown RBP10.67□□□□□ -0.7
COL12A1-201ENST00000322507 TUBA3CQ13748 450 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 KLHL14Q9P2G3 628 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 SLC17A8Q8NDX2 589 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 F6X3S4 739 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 DENND2CQ68D51 928 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 RFWD2Q8NHY2 731 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 UBE2OQ9C0C9 1292 aaKnown RBP10.67□□□□□ -0.7
COL12A1-201ENST00000322507 CAPN1P07384 714 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 C6orf118Q5T5N4 469 aa10.67□□□□□ -0.7
COL12A1-201ENST00000322507 TRIML2Q8N7C3 387 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms