RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 EXOC4Q96A65 974 aa10.88□□□□□ -0.67
RPGR-201ENST00000318842 ABHD10Q9NUJ1 306 aa10.88□□□□□ -0.67
RPGR-201ENST00000318842 SPATA31A3Q5VYP0 1347 aa10.88□□□□□ -0.67
RPGR-201ENST00000318842 CPLX2Q6PUV4 134 aaKnown RBP10.88□□□□□ -0.67
RPGR-201ENST00000318842 KAT2BQ92831 832 aa10.88□□□□□ -0.67
RPGR-201ENST00000318842 GPKOWQ92917 476 aaPredicted RBP eCLIP10.88□□□□□ -0.67
RPGR-201ENST00000318842 NAPGQ99747 312 aaPredicted RBP10.88□□□□□ -0.67
RPGR-201ENST00000318842 KANSL2Q9H9L4 492 aa10.88□□□□□ -0.67
RPGR-201ENST00000318842 DYNLL1P63167 89 aaKnown RBP10.87□□□□□ -0.67
RPGR-201ENST00000318842 PTGDRQ13258 359 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 WTAPQ15007 396 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 SAFBQ15424 915 aaKnown RBP eCLIP10.87□□□□□ -0.67
RPGR-201ENST00000318842 HSP90B2PQ58FF3 399 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 MUM1L1Q5H9M0 696 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 CAGE1Q8TC20 777 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 DCAF5Q96JK2 942 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 MYO6Q9UM54 1294 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 GSG1L2A8MUP6 293 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 FMNL1O95466 1100 aaPredicted RBP10.87□□□□□ -0.67
RPGR-201ENST00000318842 APBA1Q02410 837 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 MFSD6Q6ZSS7 791 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 KAT14Q9H8E8 782 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 SOS2Q07890 1332 aaPredicted RBP10.87□□□□□ -0.67
RPGR-201ENST00000318842 B4DLN1 442 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 GTF2A1P52655 376 aaPredicted RBP10.87□□□□□ -0.67
RPGR-201ENST00000318842 TRADDQ15628 312 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 MLKLQ8NB16 471 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 RASSF8Q8NHQ8 419 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 PCMTD1Q96MG8 357 aaPredicted RBP10.87□□□□□ -0.67
RPGR-201ENST00000318842 MLXIPQ9HAP2 919 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 JADE2Q9NQC1 790 aa10.87□□□□□ -0.67
RPGR-201ENST00000318842 HERVK_113P62684 666 aa10.86□□□□□ -0.67
RPGR-201ENST00000318842 MAP9Q49MG5 647 aa10.86□□□□□ -0.67
RPGR-201ENST00000318842 CCDC122Q5T0U0 273 aa10.86□□□□□ -0.67
RPGR-201ENST00000318842 SPATA1Q5VX52 437 aa10.86□□□□□ -0.67
RPGR-201ENST00000318842 ZNF654Q8IZM8 581 aa10.86□□□□□ -0.67
RPGR-201ENST00000318842 CRACR2BQ8N4Y2 399 aaPredicted RBP10.86□□□□□ -0.67
RPGR-201ENST00000318842 NELFBQ8WX92 580 aa10.86□□□□□ -0.67
RPGR-201ENST00000318842 ECM2O94769 699 aaPredicted RBP10.86□□□□□ -0.67
RPGR-201ENST00000318842 PRCPP42785 496 aa10.86□□□□□ -0.67
RPGR-201ENST00000318842 CHADLQ6NUI6 762 aa10.86□□□□□ -0.67
RPGR-201ENST00000318842 SAMD1Q6SPF0 538 aaPredicted RBP10.86□□□□□ -0.67
RPGR-201ENST00000318842 EP400NLQ6ZTU2 488 aa10.86□□□□□ -0.67
RPGR-201ENST00000318842 CCDC155Q8N6L0 562 aa10.86□□□□□ -0.67
RPGR-201ENST00000318842 LRRC15Q8TF66 581 aa10.86□□□□□ -0.67
RPGR-201ENST00000318842 COG1Q8WTW3 980 aa10.86□□□□□ -0.67
RPGR-201ENST00000318842 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.86□□□□□ -0.67
RPGR-201ENST00000318842 DMGDHQ9UI17 866 aaKnown RBP10.86□□□□□ -0.67
RPGR-201ENST00000318842 TRMT112Q9UI30 125 aaKnown RBP10.86□□□□□ -0.67
RPGR-201ENST00000318842 RIPOR2Q9Y4F9 1068 aa10.86□□□□□ -0.67
RPGR-201ENST00000318842 RIC1Q4ADV7 1423 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 KCNJ18B7U540 433 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 CDKL5O76039 1030 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 KCNQ4P56696 695 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 KCNJ12Q14500 433 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 BRD3Q15059 726 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 FANCBQ8NB91 859 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 TNKSO95271 1327 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 TCRBV5S4A2TA0A5A2 114 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 TPM1P09493 284 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 COPB1P53618 953 aaKnown RBP10.85□□□□□ -0.67
RPGR-201ENST00000318842 TRIM22Q8IYM9 498 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 MS4A14Q96JA4 679 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.85□□□□□ -0.67
RPGR-201ENST00000318842 C4AP0C0L4 1744 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 C4BP0C0L5 1744 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 PLEKHG2Q9H7P9 1386 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 ARFGEF2Q9Y6D5 1785 aa10.85□□□□□ -0.67
RPGR-201ENST00000318842 TRIM75PA6NK02 468 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 ZEB2O60315 1214 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 CYP2D6P10635 497 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 PDE6BP35913 854 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 PBX1P40424 430 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 PKN1Q16512 942 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 TTC31Q49AM3 519 aaPredicted RBP10.84□□□□□ -0.67
RPGR-201ENST00000318842 AKNAD1Q5T1N1 836 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 CTR9Q6PD62 1173 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 FCHSD1Q86WN1 690 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 HPCAL4Q9UM19 191 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 SRPRBQ9Y5M8 271 aaKnown RBP10.84□□□□□ -0.67
RPGR-201ENST00000318842 MYH13Q9UKX3 1938 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 AGPSO00116 658 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 IRS4O14654 1257 aaPredicted RBP10.84□□□□□ -0.67
RPGR-201ENST00000318842 EPHB6O15197 1021 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 EIF3JO75822 258 aaKnown RBP10.84□□□□□ -0.67
RPGR-201ENST00000318842 AMPD2Q01433 879 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 PDCLQ13371 301 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 CDKAL1Q5VV42 579 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 SND1Q7KZF4 910 aaKnown RBP eCLIP10.84□□□□□ -0.67
RPGR-201ENST00000318842 IRF2BP1Q8IU81 584 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 ARL8AQ96BM9 186 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 PANX2Q96RD6 677 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 PACSIN2Q9UNF0 486 aaPredicted RBP10.84□□□□□ -0.67
RPGR-201ENST00000318842 NDUFA10O95299 355 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 NFRKBQ6P4R8 1299 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 WDR59Q6PJI9 974 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 KIAA1328Q86T90 577 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 CEP112Q8N8E3 955 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 SPATA5Q8NB90 893 aa10.84□□□□□ -0.67
RPGR-201ENST00000318842 UBAC1Q9BSL1 405 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms