RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 IQCB1Q15051 598 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 MAP3K11Q16584 847 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 FAM47AQ5JRC9 791 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 SARM1Q6SZW1 724 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 SH3RF1Q7Z6J0 888 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 MAPKAPK5Q8IW41 473 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 CCAR1Q8IX12 1150 aaKnown RBP8.28□□□□□ -1.08
NPHP1-201ENST00000316534 PNMA1Q8ND90 353 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 ZMYND12Q9H0C1 365 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 BARHL2Q9NY43 387 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 CHRNA5P30532 468 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 CLK2P49760 499 aaKnown RBP8.28□□□□□ -1.08
NPHP1-201ENST00000316534 CCDC93Q567U6 631 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 DIS3L2Q8IYB7 885 aaKnown RBP8.28□□□□□ -1.08
NPHP1-201ENST00000316534 PDGFDQ9GZP0 370 aaPredicted RBP8.28□□□□□ -1.08
NPHP1-201ENST00000316534 KCNQ5Q9NR82 932 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 TTF2Q9UNY4 1162 aaKnown RBP8.28□□□□□ -1.08
NPHP1-201ENST00000316534 MYH7BA7E2Y1 1941 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 SARSP49591 514 aaKnown RBP8.28□□□□□ -1.08
NPHP1-201ENST00000316534 EARS2Q5JPH6 523 aaKnown RBP8.28□□□□□ -1.08
NPHP1-201ENST00000316534 SIAH1Q8IUQ4 282 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 AMOTL1Q8IY63 956 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 OTOFQ9HC10 1997 aa8.28□□□□□ -1.08
NPHP1-201ENST00000316534 PRDM1O75626 825 aa8.27□□□□□ -1.08
NPHP1-201ENST00000316534 BMP15O95972 392 aa8.27□□□□□ -1.08
NPHP1-201ENST00000316534 KRT2P35908 639 aa8.27□□□□□ -1.08
NPHP1-201ENST00000316534 ATP2C1P98194 919 aaPredicted RBP8.27□□□□□ -1.08
NPHP1-201ENST00000316534 SF3A1Q15459 793 aaKnown RBP8.27□□□□□ -1.08
NPHP1-201ENST00000316534 MSL1Q68DK7 614 aa8.27□□□□□ -1.08
NPHP1-201ENST00000316534 RSBN1LQ6PCB5 846 aaPredicted RBP8.27□□□□□ -1.08
NPHP1-201ENST00000316534 GMCL1P1Q8NEA9 526 aa8.27□□□□□ -1.08
NPHP1-201ENST00000316534 OXER1Q8TDS5 423 aa8.27□□□□□ -1.08
NPHP1-201ENST00000316534 CCDC17Q96LX7 622 aa8.27□□□□□ -1.08
NPHP1-201ENST00000316534 NYAP2Q9P242 653 aa8.27□□□□□ -1.08
NPHP1-201ENST00000316534 JAG2Q9Y219 1238 aa8.27□□□□□ -1.08
NPHP1-201ENST00000316534 TSPY2A6NKD2 308 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 BTBD18B2RXH4 712 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 ZNF280AP59817 542 aaPredicted RBP8.27□□□□□ -1.09
NPHP1-201ENST00000316534 TYRO3Q06418 890 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 RRP12Q5JTH9 1297 aaKnown RBP8.27□□□□□ -1.09
NPHP1-201ENST00000316534 TTLL6Q8N841 843 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 AGBL3Q8NEM8 1001 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 USP25Q9UHP3 1055 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 LOXHD1Q8IVV2 1947 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 AP5Z1O43299 807 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 EDIL3O43854 480 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 PDHBP11177 359 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 CDC25BP30305 580 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 NDUFA8P51970 172 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 ASPRV1Q53RT3 343 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 RAB11FIP4Q86YS3 637 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 STAG2Q8N3U4 1231 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 SLC44A5Q8NCS7 719 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 CEP95Q96GE4 821 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 KAT14Q9H8E8 782 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 PCDHA4Q9UN74 947 aa8.27□□□□□ -1.09
NPHP1-201ENST00000316534 ADAMTS3O15072 1205 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 SEMA3FQ13275 785 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 CT47A1Q5JQC4 288 aaPredicted RBP8.26□□□□□ -1.09
NPHP1-201ENST00000316534 TYW1BQ6NUM6 668 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 BTNL9Q6UXG8 535 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 CTCFLQ8NI51 663 aaPredicted RBP8.26□□□□□ -1.09
NPHP1-201ENST00000316534 FAM200AQ8TCP9 573 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 MXD3Q9BW11 206 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 USP40Q9NVE5 1235 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 RIMBP2O15034 1052 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 PLA2G6O60733 806 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 TSPY3P0CV98 308 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 TSPY8P0CW00 308 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 CCDC192P0DO97 292 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 GUCY1B3Q02153 619 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 DOK7Q18PE1 504 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 ARL6IP4Q66PJ3 421 aaKnown RBP8.26□□□□□ -1.09
NPHP1-201ENST00000316534 PLA2G4DQ86XP0 818 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 FOXP4Q8IVH2 680 aaPredicted RBP8.26□□□□□ -1.09
NPHP1-201ENST00000316534 MTFR1LQ9H019 292 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 SERPINB13Q9UIV8 391 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 CD2APQ9Y5K6 639 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 LRRC37A2A6NM11 1700 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 PFKFB1P16118 471 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 DPEP1P16444 411 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 CALML3P27482 149 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 PRPHP41219 470 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 PTGER2P43116 358 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 TRIM29Q14134 588 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 SPDYE2Q495Y8 402 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 CCDC144CPQ8IYA2 1237 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 PTPRFP10586 1907 aa8.26□□□□□ -1.09
NPHP1-201ENST00000316534 SPDYE2BA6NHP3 402 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 WNT7AO00755 349 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 SPDYE6P0CI01 402 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 VEGFAP15692 232 aaPredicted RBP8.25□□□□□ -1.09
NPHP1-201ENST00000316534 E2F4Q16254 413 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 AOC3Q16853 763 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 WWC2Q6AWC2 1192 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 FAM83AQ86UY5 434 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 ZFPM1Q8IX07 1006 aa8.25□□□□□ -1.09
NPHP1-201ENST00000316534 DHX40Q8IX18 779 aaKnown RBP8.25□□□□□ -1.09
NPHP1-201ENST00000316534 ZNF444Q8N0Y2 327 aaPredicted RBP8.25□□□□□ -1.09
NPHP1-201ENST00000316534 JMYQ8N9B5 988 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms