RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 GJC2Q5T442 439 aaPredicted RBP9.61□□□□□ -0.87
USF3-201ENST00000316407 hCG_1642624A0A1W2PR95 340 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 EEF1GP26641 437 aaKnown RBP9.61□□□□□ -0.87
USF3-201ENST00000316407 BZW2Q9Y6E2 419 aaKnown RBP9.61□□□□□ -0.87
USF3-201ENST00000316407 SCINQ9Y6U3 715 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 EIF3CLB5ME19 914 aaKnown RBP9.61□□□□□ -0.87
USF3-201ENST00000316407 MAGEA9P43362 315 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 ARHGAP44Q17R89 818 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 ANKRD44Q8N8A2 993 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 EIF3CQ99613 913 aaKnown RBP9.61□□□□□ -0.87
USF3-201ENST00000316407 IFT122Q9HBG6 1241 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 HLA-DOAP06340 250 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 LLGL1Q15334 1064 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 TMTC4Q5T4D3 741 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 SYCE1Q8N0S2 351 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 TRIM58Q8NG06 486 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 A0A087WUV0 522 aaPredicted RBP9.61□□□□□ -0.87
USF3-201ENST00000316407 BAG3O95817 575 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 GAS2L3Q86XJ1 694 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 NLRP7Q8WX94 980 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 SAAL1Q96ER3 474 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 TMTC3Q6ZXV5 915 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 THOC1Q96FV9 657 aaKnown RBP9.61□□□□□ -0.87
USF3-201ENST00000316407 ZNF692Q9BU19 519 aaPredicted RBP9.61□□□□□ -0.87
USF3-201ENST00000316407 FANCLQ9NW38 375 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 CALML3P27482 149 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 PSMD2Q13200 908 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 RPS6KB1P23443 525 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 MSH2P43246 934 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 MAGEA1P43355 309 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 DCUN1D2Q6PH85 259 aa9.61□□□□□ -0.87
USF3-201ENST00000316407 ESYT2A0FGR8 921 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 TADA3O75528 432 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 KRT3P12035 628 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 PSMC1P62191 440 aaKnown RBP9.6□□□□□ -0.87
USF3-201ENST00000316407 TMTC2Q8N394 836 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 AMFRQ9UKV5 643 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 ATP8A1Q9Y2Q0 1164 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 ESRRGP62508 458 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 TERF2Q15554 542 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.6□□□□□ -0.87
USF3-201ENST00000316407 SCYL1Q96KG9 808 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 EPS15L1Q9UBC2 864 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 BCAP29Q9UHQ4 241 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 C6orf229H3BNL8 230 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 KIAA2013Q8IYS2 634 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 POC1B-GALNT4F8VUJ3 575 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 TADA2BQ86TJ2 420 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 HIPK4Q8NE63 616 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 SH3GL3Q99963 347 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 LSM14BQ9BX40 385 aaKnown RBP9.6□□□□□ -0.87
USF3-201ENST00000316407 KDM2BQ8NHM5 1336 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 LRGUKQ96M69 825 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 TSKSQ9UJT2 592 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 PALM2Q8IXS6 379 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 DDX17Q92841 729 aaKnown RBP9.6□□□□□ -0.87
USF3-201ENST00000316407 ZMYM4Q5VZL5 1548 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 PNMA6AP0CW24 399 aaPredicted RBP9.6□□□□□ -0.87
USF3-201ENST00000316407 DAB2P98082 770 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 GRAMD1BQ3KR37 738 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 GCNT3O95395 438 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 PHBP35232 272 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 TFCP2Q12800 502 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 KAZNQ674X7 775 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 DYMQ7RTS9 669 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 RSBN1LQ6PCB5 846 aaPredicted RBP9.6□□□□□ -0.87
USF3-201ENST00000316407 HOMEZQ8IX15 550 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 TXLNGQ9NUQ3 528 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 CCDC169A6NNP5 214 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 NELFCDQ8IXH7 590 aa9.6□□□□□ -0.87
USF3-201ENST00000316407 CLCN6P51797 869 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 EHHADHQ08426 723 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 HIBCHQ6NVY1 386 aaPredicted RBP9.59□□□□□ -0.87
USF3-201ENST00000316407 SRGAP1Q7Z6B7 1085 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 NUDT16Q96DE0 195 aaKnown RBP9.59□□□□□ -0.87
USF3-201ENST00000316407 FIS1Q9Y3D6 152 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 SOS1Q07889 1333 aaPredicted RBP9.59□□□□□ -0.87
USF3-201ENST00000316407 ENO4A6NNW6 628 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 RAP1GDS1P52306 607 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 TMED2Q15363 201 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 NDUFB9Q9Y6M9 179 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 DDX39AO00148 427 aaKnown RBP9.59□□□□□ -0.87
USF3-201ENST00000316407 CCDC159P0C7I6 412 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 SKIP12755 728 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 RPL13P26373 211 aaKnown RBP9.59□□□□□ -0.87
USF3-201ENST00000316407 RABGGTAQ92696 567 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 MRPL44Q9H9J2 332 aaKnown RBP9.59□□□□□ -0.87
USF3-201ENST00000316407 STAC3Q96MF2 364 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 DHX32Q7L7V1 743 aaKnown RBP9.59□□□□□ -0.87
USF3-201ENST00000316407 TBC1D1Q86TI0 1168 aaPredicted RBP9.59□□□□□ -0.87
USF3-201ENST00000316407 KIF14Q15058 1648 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 CCDC125Q86Z20 511 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 ST13P4Q8IZP2 240 aaPredicted RBP9.59□□□□□ -0.87
USF3-201ENST00000316407 USP28Q96RU2 1077 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 SMYD3Q9H7B4 428 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 WDR91A4D1P6 747 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 SLC27A2O14975 620 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 MRPS25P82663 173 aaKnown RBP9.59□□□□□ -0.87
USF3-201ENST00000316407 FGD4Q96M96 766 aa9.59□□□□□ -0.87
USF3-201ENST00000316407 ARHGAP4P98171 946 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms