RNA–Protein interactions for RNA: ENST00000314583.7

HCLS1-201, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCLS1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-201ENST00000314583 MXD3Q9BW11 206 aa21.21■□□□□ 0.99
HCLS1-201ENST00000314583 SH3GLB2Q9NR46 395 aa21.21■□□□□ 0.99
HCLS1-201ENST00000314583 SRPRBQ9Y5M8 271 aaKnown RBP21.21■□□□□ 0.99
HCLS1-201ENST00000314583 KIF13BQ9NQT8 1826 aa21.2■□□□□ 0.98
HCLS1-201ENST00000314583 MYH8P13535 1937 aa21.2■□□□□ 0.98
HCLS1-201ENST00000314583 SCN9AQ15858 1988 aa21.2■□□□□ 0.98
HCLS1-201ENST00000314583 NLRP12P59046 1061 aa21.2■□□□□ 0.98
HCLS1-201ENST00000314583 PLA2G4DQ86XP0 818 aa21.2■□□□□ 0.98
HCLS1-201ENST00000314583 NEDD1Q8NHV4 660 aa21.2■□□□□ 0.98
HCLS1-201ENST00000314583 SLC16A10Q8TF71 515 aa21.2■□□□□ 0.98
HCLS1-201ENST00000314583 CLIC6Q96NY7 704 aa21.2■□□□□ 0.98
HCLS1-201ENST00000314583 LZTS2Q9BRK4 669 aa21.2■□□□□ 0.98
HCLS1-201ENST00000314583 PCDHB6Q9Y5E3 794 aa21.2■□□□□ 0.98
HCLS1-201ENST00000314583 CALML3P27482 149 aa21.19■□□□□ 0.98
HCLS1-201ENST00000314583 FAM177A1Q8N128 213 aaPredicted RBP21.19■□□□□ 0.98
HCLS1-201ENST00000314583 TNFRSF25Q93038 417 aa21.19■□□□□ 0.98
HCLS1-201ENST00000314583 DBNDD1Q9H9R9 158 aa21.19■□□□□ 0.98
HCLS1-201ENST00000314583 HOOK1Q9UJC3 728 aaKnown RBP21.19■□□□□ 0.98
HCLS1-201ENST00000314583 KCNH3Q9ULD8 1083 aa21.19■□□□□ 0.98
HCLS1-201ENST00000314583 TTF2Q9UNY4 1162 aaKnown RBP21.19■□□□□ 0.98
HCLS1-201ENST00000314583 hCG_1642624A0A1W2PR95 340 aa21.19■□□□□ 0.98
HCLS1-201ENST00000314583 USP17L3A6NCW0 530 aa21.19■□□□□ 0.98
HCLS1-201ENST00000314583 USP17L4A6NCW7 530 aa21.19■□□□□ 0.98
HCLS1-201ENST00000314583 G3V3G9 751 aa21.19■□□□□ 0.98
HCLS1-201ENST00000314583 ZNF75DP51815 510 aa21.19■□□□□ 0.98
HCLS1-201ENST00000314583 DCAF8Q5TAQ9 597 aa21.19■□□□□ 0.98
HCLS1-201ENST00000314583 USP17L1Q7RTZ2 530 aa21.19■□□□□ 0.98
HCLS1-201ENST00000314583 SLC44A5Q8NCS7 719 aa21.19■□□□□ 0.98
HCLS1-201ENST00000314583 TRIM5Q9C035 493 aa21.19■□□□□ 0.98
HCLS1-201ENST00000314583 CDC25BP30305 580 aa21.18■□□□□ 0.98
HCLS1-201ENST00000314583 TRAPPC10P48553 1259 aa21.18■□□□□ 0.98
HCLS1-201ENST00000314583 HHIPL2Q6UWX4 724 aa21.18■□□□□ 0.98
HCLS1-201ENST00000314583 TUBE1Q9UJT0 475 aa21.18■□□□□ 0.98
HCLS1-201ENST00000314583 PLIN4Q96Q06 1357 aa21.18■□□□□ 0.98
HCLS1-201ENST00000314583 ECE2O60344 883 aa21.17■□□□□ 0.98
HCLS1-201ENST00000314583 NLRP5P59047 1200 aa21.17■□□□□ 0.98
HCLS1-201ENST00000314583 KIAA2012Q0VF49 1180 aa21.17■□□□□ 0.98
HCLS1-201ENST00000314583 NPY5RQ15761 445 aa21.17■□□□□ 0.98
HCLS1-201ENST00000314583 KRBA2Q6ZNG9 492 aa21.17■□□□□ 0.98
HCLS1-201ENST00000314583 DHX40Q8IX18 779 aaKnown RBP21.17■□□□□ 0.98
HCLS1-201ENST00000314583 TMEM47Q9BQJ4 181 aa21.17■□□□□ 0.98
HCLS1-201ENST00000314583 ZNF219Q9P2Y4 722 aaPredicted RBP21.17■□□□□ 0.98
HCLS1-201ENST00000314583 F8W031 263 aaPredicted RBP21.17■□□□□ 0.98
HCLS1-201ENST00000314583 STRIP1Q5VSL9 837 aa21.17■□□□□ 0.98
HCLS1-201ENST00000314583 KCNQ5Q9NR82 932 aa21.17■□□□□ 0.98
HCLS1-201ENST00000314583 MAD2L2Q9UI95 211 aa21.17■□□□□ 0.98
HCLS1-201ENST00000314583 DACT2Q5SW24 774 aa21.16■□□□□ 0.98
HCLS1-201ENST00000314583 CNNM3Q8NE01 707 aa21.16■□□□□ 0.98
HCLS1-201ENST00000314583 FERMT2Q96AC1 680 aa21.16■□□□□ 0.98
HCLS1-201ENST00000314583 STX8Q9UNK0 236 aa21.16■□□□□ 0.98
HCLS1-201ENST00000314583 SUPT20HQ8NEM7 779 aa21.16■□□□□ 0.98
HCLS1-201ENST00000314583 ERCC4Q92889 916 aaPredicted RBP21.16■□□□□ 0.98
HCLS1-201ENST00000314583 MRIQ9BWK5 157 aa21.16■□□□□ 0.98
HCLS1-201ENST00000314583 PSME4Q14997 1843 aa21.15■□□□□ 0.98
HCLS1-201ENST00000314583 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.15■□□□□ 0.98
HCLS1-201ENST00000314583 PALM3A6NDB9 673 aaPredicted RBP21.15■□□□□ 0.98
HCLS1-201ENST00000314583 NOVP48745 357 aa21.15■□□□□ 0.98
HCLS1-201ENST00000314583 CCDC148Q8NFR7 591 aa21.15■□□□□ 0.98
HCLS1-201ENST00000314583 MYO3BQ8WXR4 1341 aa21.14■□□□□ 0.98
HCLS1-201ENST00000314583 TOP1P11387 765 aaKnown RBP21.14■□□□□ 0.98
HCLS1-201ENST00000314583 SCNN1DP51172 638 aa21.14■□□□□ 0.98
HCLS1-201ENST00000314583 DPCR1Q3MIW9 517 aa21.14■□□□□ 0.98
HCLS1-201ENST00000314583 TTC38Q5R3I4 469 aa21.14■□□□□ 0.98
HCLS1-201ENST00000314583 GALNT17Q6IS24 598 aa21.14■□□□□ 0.98
HCLS1-201ENST00000314583 KANK3Q6NY19 840 aa21.14■□□□□ 0.98
HCLS1-201ENST00000314583 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.14■□□□□ 0.98
HCLS1-201ENST00000314583 AOPEPQ8N6M6 819 aa21.14■□□□□ 0.98
HCLS1-201ENST00000314583 TEKT1Q969V4 418 aa21.14■□□□□ 0.98
HCLS1-201ENST00000314583 MRFAP1L1Q96HT8 127 aa21.14■□□□□ 0.98
HCLS1-201ENST00000314583 ATP2B1P20020 1258 aa21.14■□□□□ 0.97
HCLS1-201ENST00000314583 TPM4P67936 248 aa21.14■□□□□ 0.97
HCLS1-201ENST00000314583 AOC3Q16853 763 aa21.14■□□□□ 0.97
HCLS1-201ENST00000314583 GRIPAP1Q4V328 841 aa21.14■□□□□ 0.97
HCLS1-201ENST00000314583 EARS2Q5JPH6 523 aaKnown RBP21.14■□□□□ 0.97
HCLS1-201ENST00000314583 APOBEC3HQ6NTF7 200 aaKnown RBP21.14■□□□□ 0.97
HCLS1-201ENST00000314583 STAG2Q8N3U4 1231 aa21.14■□□□□ 0.97
HCLS1-201ENST00000314583 SPZ1Q9BXG8 430 aa21.14■□□□□ 0.97
HCLS1-201ENST00000314583 FAM205CA6NFA0 338 aa21.13■□□□□ 0.97
HCLS1-201ENST00000314583 SMTNL1A8MU46 457 aa21.13■□□□□ 0.97
HCLS1-201ENST00000314583 KCNA3P22001 575 aa21.13■□□□□ 0.97
HCLS1-201ENST00000314583 SMARCA1P28370 1054 aa21.13■□□□□ 0.97
HCLS1-201ENST00000314583 LONRF3Q496Y0 759 aa21.13■□□□□ 0.97
HCLS1-201ENST00000314583 SPC24Q8NBT2 197 aa21.13■□□□□ 0.97
HCLS1-201ENST00000314583 CCDC34Q96HJ3 373 aa21.13■□□□□ 0.97
HCLS1-201ENST00000314583 DDX4Q9NQI0 724 aaKnown RBP21.13■□□□□ 0.97
HCLS1-201ENST00000314583 USP40Q9NVE5 1235 aa21.13■□□□□ 0.97
HCLS1-201ENST00000314583 SWAP70Q9UH65 585 aa21.13■□□□□ 0.97
HCLS1-201ENST00000314583 OFD1O75665 1012 aa21.12■□□□□ 0.97
HCLS1-201ENST00000314583 CRKP46108 304 aa21.12■□□□□ 0.97
HCLS1-201ENST00000314583 HDLBPQ00341 1268 aaKnown RBP21.12■□□□□ 0.97
HCLS1-201ENST00000314583 GABPAQ06546 454 aa21.12■□□□□ 0.97
HCLS1-201ENST00000314583 CDC42EP5Q6NZY7 148 aa21.12■□□□□ 0.97
HCLS1-201ENST00000314583 METTL16Q86W50 562 aaKnown RBP21.12■□□□□ 0.97
HCLS1-201ENST00000314583 BLIDQ8IZY5 108 aa21.12■□□□□ 0.97
HCLS1-201ENST00000314583 TTLL6Q8N841 843 aa21.12■□□□□ 0.97
HCLS1-201ENST00000314583 DAGLBQ8NCG7 672 aa21.12■□□□□ 0.97
HCLS1-201ENST00000314583 ZDHHC15Q96MV8 337 aa21.12■□□□□ 0.97
HCLS1-201ENST00000314583 PCDHA4Q9UN74 947 aa21.12■□□□□ 0.97
HCLS1-201ENST00000314583 BAZ2BQ9UIF8 2168 aaKnown RBP21.12■□□□□ 0.97
HCLS1-201ENST00000314583 C21orf2O43822 256 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms