RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 ZNF526Q8TF50 670 aaPredicted RBP28.91■■■□□ 2.22
CDPF1-201ENST00000314567 CEP95Q96GE4 821 aa28.91■■■□□ 2.22
CDPF1-201ENST00000314567 ZSCAN23Q3MJ62 389 aa28.91■■■□□ 2.22
CDPF1-201ENST00000314567 IFIT1BQ5T764 474 aaKnown RBP28.91■■■□□ 2.22
CDPF1-201ENST00000314567 USP50Q70EL3 339 aaPredicted RBP28.91■■■□□ 2.22
CDPF1-201ENST00000314567 ZNF654Q8IZM8 581 aa28.91■■■□□ 2.22
CDPF1-201ENST00000314567 FAM217BQ9NTX9 383 aaPredicted RBP28.91■■■□□ 2.22
CDPF1-201ENST00000314567 HERC5Q9UII4 1024 aaKnown RBP28.91■■■□□ 2.22
CDPF1-201ENST00000314567 RTN1Q16799 776 aa28.9■■■□□ 2.22
CDPF1-201ENST00000314567 FBXO18Q8NFZ0 1043 aa28.9■■■□□ 2.22
CDPF1-201ENST00000314567 STX8Q9UNK0 236 aa28.9■■■□□ 2.22
CDPF1-201ENST00000314567 PPFIA3O75145 1194 aa28.89■■■□□ 2.22
CDPF1-201ENST00000314567 RRAGCQ9HB90 399 aa28.89■■■□□ 2.22
CDPF1-201ENST00000314567 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.89■■■□□ 2.22
CDPF1-201ENST00000314567 CFAP45Q9UL16 551 aa28.89■■■□□ 2.22
CDPF1-201ENST00000314567 IQCA1LA6NCM1 817 aa28.89■■■□□ 2.21
CDPF1-201ENST00000314567 IFNAR1P17181 557 aa28.89■■■□□ 2.21
CDPF1-201ENST00000314567 DCPSQ96C86 337 aaKnown RBP28.89■■■□□ 2.21
CDPF1-201ENST00000314567 TMEM63CQ9P1W3 806 aa28.89■■■□□ 2.21
CDPF1-201ENST00000314567 GREB1LQ9C091 1923 aaPredicted RBP28.88■■■□□ 2.21
CDPF1-201ENST00000314567 FAM173BQ6P4H8 233 aa28.88■■■□□ 2.21
CDPF1-201ENST00000314567 TCP11L1Q9NUJ3 509 aa28.88■■■□□ 2.21
CDPF1-201ENST00000314567 FOSBP53539 338 aa28.87■■■□□ 2.21
CDPF1-201ENST00000314567 PITPNM2Q9BZ72 1349 aa28.87■■■□□ 2.21
CDPF1-201ENST00000314567 IGKV6D-41A0A0C4DH26 115 aa28.87■■■□□ 2.21
CDPF1-201ENST00000314567 CALM1P0DP23 149 aa28.87■■■□□ 2.21
CDPF1-201ENST00000314567 CALM2P0DP24 149 aa28.87■■■□□ 2.21
CDPF1-201ENST00000314567 CALM3P0DP25 149 aa28.87■■■□□ 2.21
CDPF1-201ENST00000314567 WASF1Q92558 559 aa28.87■■■□□ 2.21
CDPF1-201ENST00000314567 SPATA32Q96LK8 384 aa28.87■■■□□ 2.21
CDPF1-201ENST00000314567 PLIN4Q96Q06 1357 aa28.86■■■□□ 2.21
CDPF1-201ENST00000314567 FMNL1O95466 1100 aaPredicted RBP28.86■■■□□ 2.21
CDPF1-201ENST00000314567 GH2P01242 217 aa28.86■■■□□ 2.21
CDPF1-201ENST00000314567 GUCY1A2P33402 732 aa28.86■■■□□ 2.21
CDPF1-201ENST00000314567 SSRP1Q08945 709 aaKnown RBP28.86■■■□□ 2.21
CDPF1-201ENST00000314567 ABCB5Q2M3G0 1257 aa28.86■■■□□ 2.21
CDPF1-201ENST00000314567 NUP133Q8WUM0 1156 aa28.86■■■□□ 2.21
CDPF1-201ENST00000314567 RBM27Q9P2N5 1060 aaKnown RBP28.86■■■□□ 2.21
CDPF1-201ENST00000314567 MTMR7Q9Y216 660 aa28.86■■■□□ 2.21
CDPF1-201ENST00000314567 SSC5DA1L4H1 1573 aa28.86■■■□□ 2.21
CDPF1-201ENST00000314567 TBC1D12O60347 775 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 SEPT2Q15019 361 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 RASGRP2Q7LDG7 609 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 KRT26Q7Z3Y9 468 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 CATIPQ7Z7H3 387 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 FANCBQ8NB91 859 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 ZNF396Q96N95 335 aaPredicted RBP28.85■■■□□ 2.21
CDPF1-201ENST00000314567 TMEM47Q9BQJ4 181 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 ALG1Q9BT22 464 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 MTMR4Q9NYA4 1195 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 DDAH1O94760 285 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 MRE11P49959 708 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 CCDC178Q5BJE1 867 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 SULF1Q8IWU6 871 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 LEO1Q8WVC0 666 aaPredicted RBP28.85■■■□□ 2.21
CDPF1-201ENST00000314567 CCDC17Q96LX7 622 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 NMRK2Q9NPI5 230 aa28.85■■■□□ 2.21
CDPF1-201ENST00000314567 GUCY1B3Q02153 619 aa28.84■■■□□ 2.21
CDPF1-201ENST00000314567 MAP3K10Q02779 954 aa28.84■■■□□ 2.21
CDPF1-201ENST00000314567 PRKG1Q13976 671 aa28.84■■■□□ 2.21
CDPF1-201ENST00000314567 BRAPQ7Z569 592 aa28.84■■■□□ 2.21
CDPF1-201ENST00000314567 DGKHQ86XP1 1220 aa28.84■■■□□ 2.21
CDPF1-201ENST00000314567 TRIM22Q8IYM9 498 aa28.84■■■□□ 2.21
CDPF1-201ENST00000314567 PHF20L1A8MW92 1017 aa28.83■■■□□ 2.21
CDPF1-201ENST00000314567 ATP2B2Q01814 1243 aa28.83■■■□□ 2.21
CDPF1-201ENST00000314567 PHKBQ93100 1093 aa28.83■■■□□ 2.21
CDPF1-201ENST00000314567 RBM28Q9NW13 759 aaKnown RBP28.83■■■□□ 2.21
CDPF1-201ENST00000314567 CLEC11AQ9Y240 323 aa28.83■■■□□ 2.21
CDPF1-201ENST00000314567 CCDC84Q86UT8 332 aaPredicted RBP28.83■■■□□ 2.2
CDPF1-201ENST00000314567 LRRC47Q8N1G4 583 aaKnown RBP28.83■■■□□ 2.2
CDPF1-201ENST00000314567 GLIS2Q9BZE0 524 aaPredicted RBP28.83■■■□□ 2.2
CDPF1-201ENST00000314567 KAT14Q9H8E8 782 aa28.83■■■□□ 2.2
CDPF1-201ENST00000314567 MYH4Q9Y623 1939 aa28.82■■■□□ 2.2
CDPF1-201ENST00000314567 ANKS1AQ92625 1134 aa28.82■■■□□ 2.2
CDPF1-201ENST00000314567 SLC26A6Q9BXS9 759 aa28.82■■■□□ 2.2
CDPF1-201ENST00000314567 TFIP11Q9UBB9 837 aaKnown RBP28.82■■■□□ 2.2
CDPF1-201ENST00000314567 CLIP2Q9UDT6 1046 aa28.82■■■□□ 2.2
CDPF1-201ENST00000314567 PNMA1Q8ND90 353 aa28.81■■■□□ 2.2
CDPF1-201ENST00000314567 PPP2R3BQ9Y5P8 575 aa28.81■■■□□ 2.2
CDPF1-201ENST00000314567 TROAPQ12815 778 aa28.8■■■□□ 2.2
CDPF1-201ENST00000314567 TRIM29Q14134 588 aa28.8■■■□□ 2.2
CDPF1-201ENST00000314567 PNMA8AQ86V59 439 aaPredicted RBP28.8■■■□□ 2.2
CDPF1-201ENST00000314567 SIAH1Q8IUQ4 282 aa28.8■■■□□ 2.2
CDPF1-201ENST00000314567 CMTR1Q8N1G2 835 aaKnown RBP28.8■■■□□ 2.2
CDPF1-201ENST00000314567 ZC3H15Q8WU90 426 aaKnown RBP28.8■■■□□ 2.2
CDPF1-201ENST00000314567 ATAD5Q96QE3 1844 aa28.8■■■□□ 2.2
CDPF1-201ENST00000314567 INPP5BP32019 993 aa28.8■■■□□ 2.2
CDPF1-201ENST00000314567 NOVP48745 357 aa28.8■■■□□ 2.2
CDPF1-201ENST00000314567 CCDC183Q5T5S1 534 aa28.8■■■□□ 2.2
CDPF1-201ENST00000314567 MAP1SQ66K74 1059 aaPredicted RBP28.8■■■□□ 2.2
CDPF1-201ENST00000314567 TMEM179Q6ZVK1 233 aa28.8■■■□□ 2.2
CDPF1-201ENST00000314567 GAS2L3Q86XJ1 694 aa28.8■■■□□ 2.2
CDPF1-201ENST00000314567 GRPEL1Q9HAV7 217 aa28.8■■■□□ 2.2
CDPF1-201ENST00000314567 MYH6P13533 1939 aa28.8■■■□□ 2.2
CDPF1-201ENST00000314567 DEXIO95424 95 aa28.79■■■□□ 2.2
CDPF1-201ENST00000314567 VEGFAP15692 232 aaPredicted RBP28.79■■■□□ 2.2
CDPF1-201ENST00000314567 CAP2P40123 477 aa28.79■■■□□ 2.2
CDPF1-201ENST00000314567 NBPF11Q86T75 865 aa28.79■■■□□ 2.2
CDPF1-201ENST00000314567 ZBTB21Q9ULJ3 1066 aa28.79■■■□□ 2.2
CDPF1-201ENST00000314567 TTLL1O95922 423 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms