RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CCDC82Q8N4S0 544 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 ANKZF1Q9H8Y5 726 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 RWDD2AQ9UIY3 292 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 ADAM21Q9UKJ8 722 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 TACC3Q9Y6A5 838 aa15.67■□□□□ 0.1
MKS1-201ENST00000313863 LRRC10BA6NIK2 292 aa15.66■□□□□ 0.1
MKS1-201ENST00000313863 MCM3P25205 808 aa15.66■□□□□ 0.1
MKS1-201ENST00000313863 STX17P56962 302 aa15.66■□□□□ 0.1
MKS1-201ENST00000313863 ZSCAN26Q16670 478 aa15.66■□□□□ 0.1
MKS1-201ENST00000313863 PUF60Q9UHX1 559 aaKnown RBP15.66■□□□□ 0.1
MKS1-201ENST00000313863 TNKSO95271 1327 aa15.66■□□□□ 0.1
MKS1-201ENST00000313863 N4BP3O15049 544 aa15.66■□□□□ 0.1
MKS1-201ENST00000313863 GYPCP04921 128 aa15.66■□□□□ 0.1
MKS1-201ENST00000313863 CD44P16070 742 aaKnown RBP15.66■□□□□ 0.1
MKS1-201ENST00000313863 TRAPPC10P48553 1259 aa15.66■□□□□ 0.1
MKS1-201ENST00000313863 SEC23AQ15436 765 aa15.66■□□□□ 0.1
MKS1-201ENST00000313863 EPSTI1Q96J88 318 aa15.66■□□□□ 0.1
MKS1-201ENST00000313863 ZCCHC17Q9NP64 241 aaKnown RBP15.66■□□□□ 0.1
MKS1-201ENST00000313863 SEC31BQ9NQW1 1179 aa15.66■□□□□ 0.1
MKS1-201ENST00000313863 ASAP1Q9ULH1 1129 aa15.66■□□□□ 0.1
MKS1-201ENST00000313863 PRKAB2O43741 272 aa15.65■□□□□ 0.1
MKS1-201ENST00000313863 GTPBP6O43824 516 aaPredicted RBP15.65■□□□□ 0.1
MKS1-201ENST00000313863 IVLP07476 585 aa15.65■□□□□ 0.1
MKS1-201ENST00000313863 HSP90B2PQ58FF3 399 aa15.65■□□□□ 0.1
MKS1-201ENST00000313863 TTC38Q5R3I4 469 aa15.65■□□□□ 0.1
MKS1-201ENST00000313863 LEKR1Q6ZMV7 388 aa15.65■□□□□ 0.1
MKS1-201ENST00000313863 SLC35F6Q8N357 371 aa15.65■□□□□ 0.1
MKS1-201ENST00000313863 PIGBQ92521 554 aa15.65■□□□□ 0.1
MKS1-201ENST00000313863 IRX2Q9BZI1 471 aaPredicted RBP15.65■□□□□ 0.1
MKS1-201ENST00000313863 ZSWIM4Q9H7M6 989 aa15.65■□□□□ 0.1
MKS1-201ENST00000313863 ABHD10Q9NUJ1 306 aa15.65■□□□□ 0.1
MKS1-201ENST00000313863 LRP2BPQ9P2M1 347 aa15.65■□□□□ 0.1
MKS1-201ENST00000313863 CTNND2Q9UQB3 1225 aa15.65■□□□□ 0.1
MKS1-201ENST00000313863 ABCA3Q99758 1704 aa15.65■□□□□ 0.1
MKS1-201ENST00000313863 EVA1CP58658 441 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 ATP2C1P98194 919 aaPredicted RBP15.64■□□□□ 0.09
MKS1-201ENST00000313863 KRT31Q15323 416 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 CCDC148Q8NFR7 591 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 HELBQ8NG08 1087 aaPredicted RBP15.64■□□□□ 0.09
MKS1-201ENST00000313863 NUP88Q99567 741 aaPredicted RBP15.64■□□□□ 0.09
MKS1-201ENST00000313863 VPS54Q9P1Q0 977 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 DISP2A7MBM2 1401 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 A0A087X0B3 334 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 DDAH1O94760 285 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 CYP19A1P11511 503 aaPredicted RBP15.64■□□□□ 0.09
MKS1-201ENST00000313863 LMAN1P49257 510 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 COPB1P53618 953 aaKnown RBP15.64■□□□□ 0.09
MKS1-201ENST00000313863 RAD51AP2Q09MP3 1159 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 PAK1Q13153 545 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 SEMA3FQ13275 785 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 RRAGBQ5VZM2 374 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 IQCA1Q86XH1 822 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 ZSCAN10Q96SZ4 725 aaPredicted RBP15.64■□□□□ 0.09
MKS1-201ENST00000313863 L1RE1Q9UN81 338 aa15.64■□□□□ 0.09
MKS1-201ENST00000313863 SOS2Q07890 1332 aaPredicted RBP15.63■□□□□ 0.09
MKS1-201ENST00000313863 ACTN2P35609 894 aa15.63■□□□□ 0.09
MKS1-201ENST00000313863 IL6STP40189 918 aaPredicted RBP15.63■□□□□ 0.09
MKS1-201ENST00000313863 FXR1P51114 621 aaKnown RBP eCLIP15.63■□□□□ 0.09
MKS1-201ENST00000313863 MCM6Q14566 821 aa15.63■□□□□ 0.09
MKS1-201ENST00000313863 PKN1Q16512 942 aa15.63■□□□□ 0.09
MKS1-201ENST00000313863 IFIT1BQ5T764 474 aaKnown RBP15.63■□□□□ 0.09
MKS1-201ENST00000313863 BRINP3Q76B58 766 aa15.63■□□□□ 0.09
MKS1-201ENST00000313863 ZNF34Q8IZ26 560 aa15.63■□□□□ 0.09
MKS1-201ENST00000313863 CMTR1Q8N1G2 835 aaKnown RBP15.63■□□□□ 0.09
MKS1-201ENST00000313863 MED4Q9NPJ6 270 aa15.63■□□□□ 0.09
MKS1-201ENST00000313863 DUOX1Q9NRD9 1551 aa15.63■□□□□ 0.09
MKS1-201ENST00000313863 H3BQF6 201 aa15.63■□□□□ 0.09
MKS1-201ENST00000313863 TSR1Q2NL82 804 aaKnown RBP15.63■□□□□ 0.09
MKS1-201ENST00000313863 ZNF658Q5TYW1 1059 aaPredicted RBP15.63■□□□□ 0.09
MKS1-201ENST00000313863 WDR93Q6P2C0 686 aa15.63■□□□□ 0.09
MKS1-201ENST00000313863 TMED8Q6PL24 325 aaPredicted RBP15.63■□□□□ 0.09
MKS1-201ENST00000313863 DZIP3Q86Y13 1208 aaKnown RBP15.63■□□□□ 0.09
MKS1-201ENST00000313863 FAM71BQ8TC56 605 aa15.63■□□□□ 0.09
MKS1-201ENST00000313863 PDE11AQ9HCR9 933 aa15.63■□□□□ 0.09
MKS1-201ENST00000313863 MYO6Q9UM54 1294 aa15.63■□□□□ 0.09
MKS1-201ENST00000313863 NHSL1Q5SYE7 1610 aa15.62■□□□□ 0.09
MKS1-201ENST00000313863 MAGEB6P1A0A0J9YX57 407 aa15.62■□□□□ 0.09
MKS1-201ENST00000313863 MINDY4BA8MYZ0 360 aa15.62■□□□□ 0.09
MKS1-201ENST00000313863 KCNJ18B7U540 433 aa15.62■□□□□ 0.09
MKS1-201ENST00000313863 H7C1D1 291 aa15.62■□□□□ 0.09
MKS1-201ENST00000313863 CYP7A1P22680 504 aa15.62■□□□□ 0.09
MKS1-201ENST00000313863 IGHMBP2P38935 993 aaKnown RBP15.62■□□□□ 0.09
MKS1-201ENST00000313863 KCNJ12Q14500 433 aa15.62■□□□□ 0.09
MKS1-201ENST00000313863 MAP9Q49MG5 647 aa15.62■□□□□ 0.09
MKS1-201ENST00000313863 TCP11X2Q5H9J9 407 aa15.62■□□□□ 0.09
MKS1-201ENST00000313863 EHBP1Q8NDI1 1231 aa15.62■□□□□ 0.09
MKS1-201ENST00000313863 RPGRIP1Q96KN7 1286 aa15.62■□□□□ 0.09
MKS1-201ENST00000313863 LAMB2P55268 1798 aa15.62■□□□□ 0.09
MKS1-201ENST00000313863 CCT6AP40227 531 aaKnown RBP15.61■□□□□ 0.09
MKS1-201ENST00000313863 FUT2Q10981 343 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 PTGDRQ13258 359 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 ZNF174Q15697 407 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 E2F4Q16254 413 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 CCDC152Q4G0S7 254 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 ENAHQ8N8S7 591 aaPredicted RBP15.61■□□□□ 0.09
MKS1-201ENST00000313863 ACRBPQ8NEB7 543 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 CTCFLQ8NI51 663 aaPredicted RBP15.61■□□□□ 0.09
MKS1-201ENST00000313863 TNFRSF25Q93038 417 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 PNKPQ96T60 521 aa15.61■□□□□ 0.09
MKS1-201ENST00000313863 HAUS4Q9H6D7 363 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms