RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 ANKS1AQ92625 1134 aa18.42■□□□□ 0.54
TUBA3E-201ENST00000312988 CHMP4CQ96CF2 233 aa18.42■□□□□ 0.54
TUBA3E-201ENST00000312988 KIAA1683Q9H0B3 1180 aa18.42■□□□□ 0.54
TUBA3E-201ENST00000312988 SENP2Q9HC62 589 aa18.42■□□□□ 0.54
TUBA3E-201ENST00000312988 TMOD4Q9NZQ9 345 aa18.42■□□□□ 0.54
TUBA3E-201ENST00000312988 ISY1Q9ULR0 285 aaKnown RBP18.42■□□□□ 0.54
TUBA3E-201ENST00000312988 PHIPQ8WWQ0 1821 aa18.42■□□□□ 0.54
TUBA3E-201ENST00000312988 CXCL11O14625 94 aa18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 SLC10A3P09131 477 aa18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 ZBTB48P10074 688 aaPredicted RBP18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 LIFRP42702 1097 aa18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 NOVP48745 357 aa18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 USP14P54578 494 aa18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 HMGCS2P54868 508 aa18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 BACE1P56817 501 aa18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 SNAPC2Q13487 334 aa18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 USP17L2Q6R6M4 530 aa18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 SYNE3Q6ZMZ3 975 aa18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 NOL8Q76FK4 1167 aaKnown RBP18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 CATIPQ7Z7H3 387 aa18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 PNMA1Q8ND90 353 aa18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 MKL1Q969V6 931 aa18.41■□□□□ 0.54
TUBA3E-201ENST00000312988 C19orf81C9J6K1 198 aa18.4■□□□□ 0.54
TUBA3E-201ENST00000312988 ST18O60284 1047 aa18.4■□□□□ 0.54
TUBA3E-201ENST00000312988 HTRA3P83110 453 aa18.4■□□□□ 0.54
TUBA3E-201ENST00000312988 ANKRD1Q15327 319 aa18.4■□□□□ 0.54
TUBA3E-201ENST00000312988 CYP4F22Q6NT55 531 aa18.4■□□□□ 0.54
TUBA3E-201ENST00000312988 GADL1Q6ZQY3 521 aa18.4■□□□□ 0.54
TUBA3E-201ENST00000312988 SYNPO2Q9UMS6 1093 aa18.4■□□□□ 0.54
TUBA3E-201ENST00000312988 KCNH4Q9UQ05 1017 aa18.4■□□□□ 0.54
TUBA3E-201ENST00000312988 SLC12A7Q9Y666 1083 aa18.4■□□□□ 0.54
TUBA3E-201ENST00000312988 KLF18A0A0U1RQI7 1052 aa18.39■□□□□ 0.54
TUBA3E-201ENST00000312988 RASSF10A6NK89 507 aa18.39■□□□□ 0.54
TUBA3E-201ENST00000312988 F5H6K3 240 aa18.39■□□□□ 0.54
TUBA3E-201ENST00000312988 GTF2A2P52657 109 aa18.39■□□□□ 0.54
TUBA3E-201ENST00000312988 AK2P54819 239 aa18.39■□□□□ 0.54
TUBA3E-201ENST00000312988 KLRC3Q07444 240 aa18.39■□□□□ 0.54
TUBA3E-201ENST00000312988 APOBRQ0VD83 1088 aa18.39■□□□□ 0.54
TUBA3E-201ENST00000312988 TOB2Q14106 344 aaPredicted RBP18.39■□□□□ 0.54
TUBA3E-201ENST00000312988 SLFN13Q68D06 897 aa18.39■□□□□ 0.54
TUBA3E-201ENST00000312988 SPICE1Q8N0Z3 855 aa18.39■□□□□ 0.54
TUBA3E-201ENST00000312988 NUP133Q8WUM0 1156 aa18.39■□□□□ 0.54
TUBA3E-201ENST00000312988 LARP6Q9BRS8 491 aaKnown RBP18.39■□□□□ 0.54
TUBA3E-201ENST00000312988 VCPKMTQ9H867 229 aa18.39■□□□□ 0.54
TUBA3E-201ENST00000312988 NDUFB10O96000 172 aa18.39■□□□□ 0.53
TUBA3E-201ENST00000312988 HSPA6P17066 643 aa18.39■□□□□ 0.53
TUBA3E-201ENST00000312988 DGKZQ13574 1117 aa18.39■□□□□ 0.53
TUBA3E-201ENST00000312988 SGMS1Q86VZ5 419 aa18.39■□□□□ 0.53
TUBA3E-201ENST00000312988 RAB11FIP4Q86YS3 637 aa18.39■□□□□ 0.53
TUBA3E-201ENST00000312988 ZNF654Q8IZM8 581 aa18.39■□□□□ 0.53
TUBA3E-201ENST00000312988 GMCL1P1Q8NEA9 526 aa18.39■□□□□ 0.53
TUBA3E-201ENST00000312988 CAPNS2Q96L46 248 aa18.39■□□□□ 0.53
TUBA3E-201ENST00000312988 A0A0G2JLL6 359 aaPredicted RBP18.38■□□□□ 0.53
TUBA3E-201ENST00000312988 CETPP11597 493 aa18.38■□□□□ 0.53
TUBA3E-201ENST00000312988 CCDC96Q2M329 555 aa18.38■□□□□ 0.53
TUBA3E-201ENST00000312988 PRRT2Q7Z6L0 340 aaPredicted RBP18.38■□□□□ 0.53
TUBA3E-201ENST00000312988 FBXL16Q8N461 479 aa18.38■□□□□ 0.53
TUBA3E-201ENST00000312988 MYL10Q9BUA6 226 aa18.38■□□□□ 0.53
TUBA3E-201ENST00000312988 AGXT2Q9BYV1 514 aa18.38■□□□□ 0.53
TUBA3E-201ENST00000312988 ALDH8A1Q9H2A2 487 aaPredicted RBP18.38■□□□□ 0.53
TUBA3E-201ENST00000312988 EMILIN3Q9NT22 766 aa18.38■□□□□ 0.53
TUBA3E-201ENST00000312988 BRPF3Q9ULD4 1205 aa18.38■□□□□ 0.53
TUBA3E-201ENST00000312988 CCL15-CCL14A0A0B4J2E2 113 aa18.37■□□□□ 0.53
TUBA3E-201ENST00000312988 GOLGA8BA8MQT2 603 aa18.37■□□□□ 0.53
TUBA3E-201ENST00000312988 FAM155AB1AL88 458 aaPredicted RBP18.37■□□□□ 0.53
TUBA3E-201ENST00000312988 DDAH1O94760 285 aa18.37■□□□□ 0.53
TUBA3E-201ENST00000312988 SLC1A4P43007 532 aa18.37■□□□□ 0.53
TUBA3E-201ENST00000312988 CCL15Q16663 113 aa18.37■□□□□ 0.53
TUBA3E-201ENST00000312988 SH3D19Q5HYK7 790 aa18.37■□□□□ 0.53
TUBA3E-201ENST00000312988 APOA5Q6Q788 366 aa18.37■□□□□ 0.53
TUBA3E-201ENST00000312988 FASTKD5Q7L8L6 764 aaKnown RBP18.37■□□□□ 0.53
TUBA3E-201ENST00000312988 MICU3Q86XE3 530 aa18.37■□□□□ 0.53
TUBA3E-201ENST00000312988 LPAR1Q92633 364 aa18.37■□□□□ 0.53
TUBA3E-201ENST00000312988 MANSC4A6NHS7 340 aaPredicted RBP18.36■□□□□ 0.53
TUBA3E-201ENST00000312988 ZBTB43O43298 467 aa18.36■□□□□ 0.53
TUBA3E-201ENST00000312988 CALM1P0DP23 149 aa18.36■□□□□ 0.53
TUBA3E-201ENST00000312988 CALM2P0DP24 149 aa18.36■□□□□ 0.53
TUBA3E-201ENST00000312988 CALM3P0DP25 149 aa18.36■□□□□ 0.53
TUBA3E-201ENST00000312988 RXRAP19793 462 aa18.36■□□□□ 0.53
TUBA3E-201ENST00000312988 KIAA1755Q5JYT7 1200 aa18.36■□□□□ 0.53
TUBA3E-201ENST00000312988 IL27Q8NEV9 243 aa18.36■□□□□ 0.53
TUBA3E-201ENST00000312988 DCAF4Q8WV16 495 aa18.36■□□□□ 0.53
TUBA3E-201ENST00000312988 NUP88Q99567 741 aaPredicted RBP18.36■□□□□ 0.53
TUBA3E-201ENST00000312988 PDHBP11177 359 aa18.35■□□□□ 0.53
TUBA3E-201ENST00000312988 VCAM1P19320 739 aa18.35■□□□□ 0.53
TUBA3E-201ENST00000312988 FAM83BQ5T0W9 1011 aa18.35■□□□□ 0.53
TUBA3E-201ENST00000312988 RASGRP2Q7LDG7 609 aa18.35■□□□□ 0.53
TUBA3E-201ENST00000312988 CCDC144CPQ8IYA2 1237 aa18.35■□□□□ 0.53
TUBA3E-201ENST00000312988 PROCA1Q8NCQ7 364 aaPredicted RBP18.35■□□□□ 0.53
TUBA3E-201ENST00000312988 CTCFLQ8NI51 663 aaPredicted RBP18.35■□□□□ 0.53
TUBA3E-201ENST00000312988 GMCL1Q96IK5 515 aa18.35■□□□□ 0.53
TUBA3E-201ENST00000312988 C12orf42Q96LP6 360 aa18.35■□□□□ 0.53
TUBA3E-201ENST00000312988 TANGO6Q9C0B7 1094 aa18.35■□□□□ 0.53
TUBA3E-201ENST00000312988 PTPRFP10586 1907 aa18.35■□□□□ 0.53
TUBA3E-201ENST00000312988 FRMPD2Q68DX3 1309 aaPredicted RBP18.35■□□□□ 0.53
TUBA3E-201ENST00000312988 GOLGA8AA7E2F4 631 aa18.34■□□□□ 0.53
TUBA3E-201ENST00000312988 WDR46O15213 610 aaKnown RBP18.34■□□□□ 0.53
TUBA3E-201ENST00000312988 PARP1P09874 1014 aaKnown RBP18.34■□□□□ 0.53
TUBA3E-201ENST00000312988 BMP3P12645 472 aa18.34■□□□□ 0.53
TUBA3E-201ENST00000312988 IKQ13123 557 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms