RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 FAM84BQ96KN1 310 aaPredicted RBP10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 ANKRD2Q9GZV1 360 aa10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 SH3GLB2Q9NR46 395 aa10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 SAMSN1Q9NSI8 373 aaKnown RBP10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 ARPP21Q9UBL0 812 aaPredicted RBP10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 IQSEC3Q9UPP2 1182 aaPredicted RBP10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 ITIH6Q6UXX5 1313 aa10.96□□□□□ -0.65
LSMEM1-201ENST00000312849 PLEKHA8P1O95397 391 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 SCG2P13521 617 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 GNG11P61952 73 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 DYNLL1P63167 89 aaKnown RBP10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 ZNF827Q17R98 1081 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 ERFEQ4G0M1 354 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 ARL6IP4Q66PJ3 421 aaKnown RBP10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 SPTY2D1Q68D10 685 aaPredicted RBP10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 ANKRD20A12PQ8NF67 263 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 SHISA4Q96DD7 197 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 EPSTI1Q96J88 318 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 MED15Q96RN5 788 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 NYXQ9GZU5 481 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 RMND1Q9NWS8 449 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 ADD3Q9UEY8 706 aaKnown RBP10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 TAF1P21675 1872 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 PPP1R3GB7ZBB8 358 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 USP17L12C9JPN9 530 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 USP17L21D6R901 530 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 GTPBP6O43824 516 aaPredicted RBP10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 PBX1P40424 430 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 AFMP43652 599 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 ADKP55263 362 aaKnown RBP10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 NLRP5P59047 1200 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 TRIM14Q14142 442 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 ZNF174Q15697 407 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 PFKFB3Q16875 520 aaPredicted RBP10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 TMCO3Q6UWJ1 677 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 APTXQ7Z2E3 356 aaKnown RBP10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 CNGA4Q8IV77 575 aa10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 GPR161Q8N6U8 529 aaKnown RBP10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 MARCH10Q8NA82 808 aaPredicted RBP10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 NSUN4Q96CB9 384 aaKnown RBP10.95□□□□□ -0.66
LSMEM1-201ENST00000312849 COL4A1P02462 1669 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 A0A087X0B3 334 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 A0A0G2JS52 829 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 PRDM1O75626 825 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 FECHP22830 423 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 LONP1P36776 959 aaKnown RBP10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 TXLNAP40222 546 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 GNAQP50148 359 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 CLCN6P51797 869 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 GOLGA8FQ08AF8 430 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 GOLGA8DPQ0D2H9 430 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 PTGDRQ13258 359 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 NPY5RQ15761 445 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 JAKMIP3Q5VZ66 844 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 BARGINQ6ZT62 677 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 IGSF22Q8N9C0 903 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 ACSBG1Q96GR2 724 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 CARD6Q9BX69 1037 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 LIMA1Q9UHB6 759 aaKnown RBP10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 RWDD2AQ9UIY3 292 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 COL24A1Q17RW2 1714 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 MYH8P13535 1937 aa10.94□□□□□ -0.66
LSMEM1-201ENST00000312849 LRRC10BA6NIK2 292 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 ADAMTS2O95450 1211 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 HIBADHP31937 336 aaKnown RBP10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 RPS8P62241 208 aaKnown RBP10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 MECOMQ03112 1051 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 E2F4Q16254 413 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 HSP90AA4PQ58FG1 418 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 EARS2Q5JPH6 523 aaKnown RBP10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 TOGARAM2Q6ZUX3 1019 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 SRBD1Q8N5C6 995 aaKnown RBP10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 ANKS1AQ92625 1134 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 DCP1AQ9NPI6 582 aaPredicted RBP10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 ZNF446Q9NWS9 450 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 MRFAP1Q9Y605 127 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 CNTNAP4Q9C0A0 1308 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 CYP2D7A0A087X1C5 515 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 MFAP3LO75121 409 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 ZRANB2O95218 330 aaKnown RBP eCLIP10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 MYL1P05976 194 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 GTF2E1P29083 439 aaPredicted RBP10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 PPP2R3AQ06190 1150 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 GALNT17Q6IS24 598 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 KLHL10Q6JEL2 608 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 PDXDC2PQ6P474 469 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 DGKHQ86XP1 1220 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 TMTC1Q8IUR5 882 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 RABGGTAQ92696 567 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 KIFC2Q96AC6 838 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 SPATA31A5Q5VU36 1347 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 SPATA31A7Q8IWB4 1347 aa10.93□□□□□ -0.66
LSMEM1-201ENST00000312849 NPHP1O15259 732 aa10.92□□□□□ -0.66
LSMEM1-201ENST00000312849 KIF5CO60282 957 aa10.92□□□□□ -0.66
LSMEM1-201ENST00000312849 PNMA6AP0CW24 399 aaPredicted RBP10.92□□□□□ -0.66
LSMEM1-201ENST00000312849 RBL2Q08999 1139 aa10.92□□□□□ -0.66
LSMEM1-201ENST00000312849 TERF2Q15554 542 aa10.92□□□□□ -0.66
LSMEM1-201ENST00000312849 ZNF658Q5TYW1 1059 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms