RNA–Protein interactions for RNA: ENST00000312635.10

USP15-202, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 1 (best) BASIC

Gene USP15, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-202ENST00000312635 POTEJP0CG39 1038 aa10.56□□□□□ -0.72
USP15-202ENST00000312635 SNHG28P0DPA3 235 aa10.56□□□□□ -0.72
USP15-202ENST00000312635 INPP5BP32019 993 aa10.56□□□□□ -0.72
USP15-202ENST00000312635 CCT2P78371 535 aaKnown RBP10.56□□□□□ -0.72
USP15-202ENST00000312635 ST3GAL1Q11201 340 aa10.56□□□□□ -0.72
USP15-202ENST00000312635 ASPRV1Q53RT3 343 aa10.56□□□□□ -0.72
USP15-202ENST00000312635 SIAH1Q8IUQ4 282 aa10.56□□□□□ -0.72
USP15-202ENST00000312635 ANKRD13AQ8IZ07 590 aa10.56□□□□□ -0.72
USP15-202ENST00000312635 ZNF526Q8TF50 670 aaPredicted RBP10.56□□□□□ -0.72
USP15-202ENST00000312635 GOPCQ9HD26 462 aa10.56□□□□□ -0.72
USP15-202ENST00000312635 SMC3Q9UQE7 1217 aa10.56□□□□□ -0.72
USP15-202ENST00000312635 CSADQ9Y600 493 aa10.56□□□□□ -0.72
USP15-202ENST00000312635 PARP1P09874 1014 aaKnown RBP10.55□□□□□ -0.72
USP15-202ENST00000312635 USP14P54578 494 aa10.55□□□□□ -0.72
USP15-202ENST00000312635 GPATCH4Q5T3I0 446 aaKnown RBP10.55□□□□□ -0.72
USP15-202ENST00000312635 RGS22Q8NE09 1264 aa10.55□□□□□ -0.72
USP15-202ENST00000312635 SMARCC2Q8TAQ2 1214 aa10.55□□□□□ -0.72
USP15-202ENST00000312635 GMCL1Q96IK5 515 aa10.55□□□□□ -0.72
USP15-202ENST00000312635 MYL10Q9BUA6 226 aa10.55□□□□□ -0.72
USP15-202ENST00000312635 RBM27Q9P2N5 1060 aaKnown RBP10.55□□□□□ -0.72
USP15-202ENST00000312635 PALM3A6NDB9 673 aaPredicted RBP10.54□□□□□ -0.72
USP15-202ENST00000312635 IFNAR1P17181 557 aa10.54□□□□□ -0.72
USP15-202ENST00000312635 PTPRAP18433 802 aa10.54□□□□□ -0.72
USP15-202ENST00000312635 SLC4A3P48751 1232 aa10.54□□□□□ -0.72
USP15-202ENST00000312635 ATP2B2Q01814 1243 aa10.54□□□□□ -0.72
USP15-202ENST00000312635 NSUN7Q8NE18 718 aaKnown RBP10.54□□□□□ -0.72
USP15-202ENST00000312635 KIAA1683Q9H0B3 1180 aa10.54□□□□□ -0.72
USP15-202ENST00000312635 FAM217BQ9NTX9 383 aaPredicted RBP10.54□□□□□ -0.72
USP15-202ENST00000312635 STK36Q9NRP7 1315 aa10.54□□□□□ -0.72
USP15-202ENST00000312635 C19orf81C9J6K1 198 aa10.54□□□□□ -0.72
USP15-202ENST00000312635 PDHBP11177 359 aa10.54□□□□□ -0.72
USP15-202ENST00000312635 CDC27P30260 824 aa10.54□□□□□ -0.72
USP15-202ENST00000312635 TTLL12Q14166 644 aaPredicted RBP10.54□□□□□ -0.72
USP15-202ENST00000312635 SLFN13Q68D06 897 aa10.54□□□□□ -0.72
USP15-202ENST00000312635 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.54□□□□□ -0.72
USP15-202ENST00000312635 TMTC3Q6ZXV5 915 aa10.54□□□□□ -0.72
USP15-202ENST00000312635 LRRC47Q8N1G4 583 aaKnown RBP10.54□□□□□ -0.72
USP15-202ENST00000312635 C2orf69Q8N8R5 385 aa10.54□□□□□ -0.72
USP15-202ENST00000312635 VCPKMTQ9H867 229 aa10.54□□□□□ -0.72
USP15-202ENST00000312635 NCOA5Q9HCD5 579 aaKnown RBP10.54□□□□□ -0.72
USP15-202ENST00000312635 CIZ1Q9ULV3 898 aaPredicted RBP10.54□□□□□ -0.72
USP15-202ENST00000312635 DOCK1Q14185 1865 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 F5H6K3 240 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 ADD1P35611 737 aaKnown RBP10.53□□□□□ -0.72
USP15-202ENST00000312635 PPATQ06203 517 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 KLRC3Q07444 240 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 SSRP1Q08945 709 aaKnown RBP10.53□□□□□ -0.72
USP15-202ENST00000312635 ZNF543Q08ER8 600 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 NTRK3Q16288 839 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 SHROOM1Q2M3G4 852 aaPredicted RBP10.53□□□□□ -0.72
USP15-202ENST00000312635 LDLRAD1Q5T700 205 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 CLEC10AQ8IUN9 316 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 TRIM22Q8IYM9 498 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 RBM46Q8TBY0 533 aaKnown RBP10.53□□□□□ -0.72
USP15-202ENST00000312635 WASF1Q92558 559 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 LPAR1Q92633 364 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 ZKSCAN4Q969J2 545 aaPredicted RBP10.53□□□□□ -0.72
USP15-202ENST00000312635 RNF26Q9BY78 433 aaPredicted RBP10.53□□□□□ -0.72
USP15-202ENST00000312635 MAD2L2Q9UI95 211 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 SNCAIPQ9Y6H5 919 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 PAPPA2Q9BXP8 1791 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 A0A1W2PRG0 241 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 PTPDC1A2A3K4 754 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 USP17L10C9JJH3 530 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 KIF3CO14782 793 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 CTDNEP1O95476 244 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 ITGBL1O95965 494 aaPredicted RBP10.53□□□□□ -0.72
USP15-202ENST00000312635 RXRAP19793 462 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 PDCP20941 246 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 GJB2P29033 226 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 PRKG1Q13976 671 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 VGLL4Q14135 290 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 USP17L2Q6R6M4 530 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 ERO1BQ86YB8 467 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 RAB11FIP4Q86YS3 637 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 CCDC144CPQ8IYA2 1237 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 ZNF280CQ8ND82 737 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 SMC1BQ8NDV3 1235 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 FEZ1Q99689 392 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 SPZ1Q9BXG8 430 aa10.53□□□□□ -0.72
USP15-202ENST00000312635 GBA2Q9HCG7 927 aaPredicted RBP10.53□□□□□ -0.72
USP15-202ENST00000312635 TRAF5O00463 557 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 PRPF3O43395 683 aaKnown RBP10.52□□□□□ -0.73
USP15-202ENST00000312635 PLA2G6O60733 806 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 FMNL1O95466 1100 aaPredicted RBP10.52□□□□□ -0.73
USP15-202ENST00000312635 NDUFB10O96000 172 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 SLC1A4P43007 532 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 AKAP17AQ02040 695 aaKnown RBP10.52□□□□□ -0.73
USP15-202ENST00000312635 DLK2Q6UY11 383 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 FAM184AQ8NB25 1140 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 ACER1Q8TDN7 264 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 C12orf42Q96LP6 360 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 SPDYE5A6NIY4 337 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 KLRF2D3W0D1 207 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 WDR46O15213 610 aaKnown RBP10.52□□□□□ -0.73
USP15-202ENST00000312635 BMP3P12645 472 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 DDIT3P35638 169 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 ECE1P42892 770 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 CCDC96Q2M329 555 aa10.52□□□□□ -0.73
USP15-202ENST00000312635 SH3D19Q5HYK7 790 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms