RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 GADL1Q6ZQY3 521 aa21.04■□□□□ 0.96
SSSCA1-201ENST00000309328 STOX1Q6ZVD7 989 aa21.04■□□□□ 0.96
SSSCA1-201ENST00000309328 SIAH1Q8IUQ4 282 aa21.04■□□□□ 0.96
SSSCA1-201ENST00000309328 ACER1Q8TDN7 264 aa21.04■□□□□ 0.96
SSSCA1-201ENST00000309328 TM6SF1Q9BZW5 370 aa21.04■□□□□ 0.96
SSSCA1-201ENST00000309328 A0A1W2PRG0 241 aa21.03■□□□□ 0.96
SSSCA1-201ENST00000309328 WDR46O15213 610 aaKnown RBP21.03■□□□□ 0.96
SSSCA1-201ENST00000309328 HOXA7P31268 230 aaPredicted RBP21.03■□□□□ 0.96
SSSCA1-201ENST00000309328 DHX32Q7L7V1 743 aaKnown RBP21.03■□□□□ 0.96
SSSCA1-201ENST00000309328 RASEFQ8IZ41 740 aa21.03■□□□□ 0.96
SSSCA1-201ENST00000309328 IL27Q8NEV9 243 aa21.03■□□□□ 0.96
SSSCA1-201ENST00000309328 GTF3C2Q8WUA4 911 aaPredicted RBP21.03■□□□□ 0.96
SSSCA1-201ENST00000309328 PARK7Q99497 189 aaKnown RBP21.03■□□□□ 0.96
SSSCA1-201ENST00000309328 SNX14Q9Y5W7 946 aa21.03■□□□□ 0.96
SSSCA1-201ENST00000309328 TNKSO95271 1327 aa21.03■□□□□ 0.96
SSSCA1-201ENST00000309328 MOGSQ13724 837 aa21.02■□□□□ 0.96
SSSCA1-201ENST00000309328 IFIT1BQ5T764 474 aaKnown RBP21.02■□□□□ 0.96
SSSCA1-201ENST00000309328 IL17RAQ96F46 866 aa21.02■□□□□ 0.96
SSSCA1-201ENST00000309328 CFHR5Q9BXR6 569 aa21.02■□□□□ 0.96
SSSCA1-201ENST00000309328 EMILIN3Q9NT22 766 aa21.02■□□□□ 0.96
SSSCA1-201ENST00000309328 TAF6LQ9Y6J9 622 aa21.02■□□□□ 0.96
SSSCA1-201ENST00000309328 USP17L15C9J2P7 530 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 BTBD19C9JJ37 291 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 USP17L13C9JLJ4 530 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 USP17L11C9JVI0 530 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 USP17L18D6R9N7 530 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 USP17L22D6RA61 530 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 USP17L17D6RBQ6 530 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 USP17L19D6RCP7 530 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 USP17L20D6RJB6 530 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 F5H6K3 240 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 IFIT3O14879 490 aaKnown RBP21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 NMT2O60551 498 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 VCAM1P19320 739 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 OSBPP22059 807 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 KLRC3Q07444 240 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 USP17L24Q0WX57 530 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 RCSD1Q6JBY9 416 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 BLOC1S2Q6QNY1 142 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 CLEC10AQ8IUN9 316 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 ENAHQ8N8S7 591 aaPredicted RBP21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 GMCL1Q96IK5 515 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 JAKMIP1Q96N16 626 aaKnown RBP21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 ZIC5Q96T25 663 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 KAT14Q9H8E8 782 aa21.01■□□□□ 0.95
SSSCA1-201ENST00000309328 PHIPQ8WWQ0 1821 aa21■□□□□ 0.95
SSSCA1-201ENST00000309328 PDHXO00330 501 aa21■□□□□ 0.95
SSSCA1-201ENST00000309328 PRC1O43663 620 aa21■□□□□ 0.95
SSSCA1-201ENST00000309328 LIFRP42702 1097 aa21■□□□□ 0.95
SSSCA1-201ENST00000309328 WTAPQ15007 396 aa21■□□□□ 0.95
SSSCA1-201ENST00000309328 TMEM67Q5HYA8 995 aa21■□□□□ 0.95
SSSCA1-201ENST00000309328 GPAT2Q6NUI2 795 aa21■□□□□ 0.95
SSSCA1-201ENST00000309328 CYB5R4Q7L1T6 521 aa21■□□□□ 0.95
SSSCA1-201ENST00000309328 PTPN18Q99952 460 aa21■□□□□ 0.95
SSSCA1-201ENST00000309328 TMEM47Q9BQJ4 181 aa21■□□□□ 0.95
SSSCA1-201ENST00000309328 IGF2BP3O00425 579 aaKnown RBP eCLIP20.99■□□□□ 0.95
SSSCA1-201ENST00000309328 IRX3P78415 501 aaPredicted RBP20.99■□□□□ 0.95
SSSCA1-201ENST00000309328 SEC23AQ15436 765 aa20.99■□□□□ 0.95
SSSCA1-201ENST00000309328 ZYXQ15942 572 aaKnown RBP20.99■□□□□ 0.95
SSSCA1-201ENST00000309328 FBXL16Q8N461 479 aa20.99■□□□□ 0.95
SSSCA1-201ENST00000309328 DCAF4Q8WV16 495 aa20.99■□□□□ 0.95
SSSCA1-201ENST00000309328 ZFYVE28Q9HCC9 887 aa20.99■□□□□ 0.95
SSSCA1-201ENST00000309328 WBP1LQ9NX94 342 aa20.99■□□□□ 0.95
SSSCA1-201ENST00000309328 MYPNQ86TC9 1320 aa20.99■□□□□ 0.95
SSSCA1-201ENST00000309328 SEC24BO95487 1268 aa20.98■□□□□ 0.95
SSSCA1-201ENST00000309328 NDUFB10O96000 172 aa20.98■□□□□ 0.95
SSSCA1-201ENST00000309328 SLFN13Q68D06 897 aa20.98■□□□□ 0.95
SSSCA1-201ENST00000309328 LRRC47Q8N1G4 583 aaKnown RBP20.98■□□□□ 0.95
SSSCA1-201ENST00000309328 FAM43AQ8N2R8 423 aa20.98■□□□□ 0.95
SSSCA1-201ENST00000309328 PNMA1Q8ND90 353 aa20.98■□□□□ 0.95
SSSCA1-201ENST00000309328 ZKSCAN3Q9BRR0 538 aa20.98■□□□□ 0.95
SSSCA1-201ENST00000309328 BACH2Q9BYV9 841 aa20.98■□□□□ 0.95
SSSCA1-201ENST00000309328 CYP46A1Q9Y6A2 500 aa20.98■□□□□ 0.95
SSSCA1-201ENST00000309328 RAD21O60216 631 aa20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 CASTP20810 708 aaKnown RBP20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 SLC1A4P43007 532 aa20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 GCLCP48506 637 aaPredicted RBP20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 ANTXR2P58335 489 aa20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 FGD1P98174 961 aa20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 EXOSC10Q01780 885 aaKnown RBP20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 TAF1CQ15572 869 aaPredicted RBP20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 ADCK5Q3MIX3 580 aa20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 NOM1Q5C9Z4 860 aaKnown RBP20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 TREML2Q5T2D2 321 aa20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 CATSPERGQ6ZRH7 1159 aa20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 IGDCC4Q8TDY8 1250 aa20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 C22orf23Q9BZE7 217 aa20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 RPAP3Q9H6T3 665 aaPredicted RBP20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 ZSWIM6Q9HCJ5 1215 aa20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 HOXC10Q9NYD6 342 aa20.97■□□□□ 0.95
SSSCA1-201ENST00000309328 LOC285556D6RIA3 1793 aa20.96■□□□□ 0.95
SSSCA1-201ENST00000309328 PLA2G6O60733 806 aa20.96■□□□□ 0.95
SSSCA1-201ENST00000309328 BMP3P12645 472 aa20.96■□□□□ 0.95
SSSCA1-201ENST00000309328 RPS6KB1P23443 525 aa20.96■□□□□ 0.95
SSSCA1-201ENST00000309328 RBM25P49756 843 aaKnown RBP20.96■□□□□ 0.95
SSSCA1-201ENST00000309328 GPATCH4Q5T3I0 446 aaKnown RBP20.96■□□□□ 0.95
SSSCA1-201ENST00000309328 RUFY3Q7L099 469 aa20.96■□□□□ 0.95
SSSCA1-201ENST00000309328 CATIPQ7Z7H3 387 aa20.96■□□□□ 0.95
SSSCA1-201ENST00000309328 SGMS1Q86VZ5 419 aa20.96■□□□□ 0.95
SSSCA1-201ENST00000309328 SMCR8Q8TEV9 937 aaPredicted RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms