RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 CNNM1Q9NRU3 951 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 HPCAL4Q9UM19 191 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 MYBL2P10244 700 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 COPB1P53618 953 aaKnown RBP16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 ZNF174Q15697 407 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 RRAGBQ5VZM2 374 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 ICE2Q659A1 982 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 MFSD6Q6ZSS7 791 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 TRAPPC11Q7Z392 1133 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 MAGEB6Q8N7X4 407 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 GSDMAQ96QA5 445 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 ITIH6Q6UXX5 1313 aa16.31■□□□□ 0.2
LRRFIP1-203ENST00000308482 PATL2C9JE40 543 aaKnown RBP16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 SMIM22K7EJ46 135 aa16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 GPTP24298 496 aa16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 GTF2A1P52655 376 aaPredicted RBP16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 TUBB4BP68371 445 aa16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 TTF1Q15361 905 aaPredicted RBP16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 ANKLE2Q86XL3 938 aa16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 RABEP2Q9H5N1 569 aa16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 XDHP47989 1333 aa16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 ZC3H4Q9UPT8 1303 aaKnown RBP16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 NDUFA10O95299 355 aa16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 CSF1RP07333 972 aa16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 FANCBQ8NB91 859 aa16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 ACBD3Q9H3P7 528 aa16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 FBXO3Q9UK99 471 aa16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 JRKLQ9Y4A0 524 aa16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 EPN1Q9Y6I3 576 aaPredicted RBP16.3■□□□□ 0.2
LRRFIP1-203ENST00000308482 GSG1L2A8MUP6 293 aa16.29■□□□□ 0.2
LRRFIP1-203ENST00000308482 PPFIA4O75335 1185 aa16.29■□□□□ 0.2
LRRFIP1-203ENST00000308482 GGCXP38435 758 aa16.29■□□□□ 0.2
LRRFIP1-203ENST00000308482 MYO1AQ9UBC5 1043 aa16.29■□□□□ 0.2
LRRFIP1-203ENST00000308482 LIMA1Q9UHB6 759 aaKnown RBP16.29■□□□□ 0.2
LRRFIP1-203ENST00000308482 SEMA3EO15041 775 aa16.29■□□□□ 0.2
LRRFIP1-203ENST00000308482 AARSP49588 968 aaKnown RBP eCLIP16.29■□□□□ 0.2
LRRFIP1-203ENST00000308482 ZNF654Q8IZM8 581 aa16.29■□□□□ 0.2
LRRFIP1-203ENST00000308482 MTRQ99707 1265 aa16.29■□□□□ 0.2
LRRFIP1-203ENST00000308482 WDR17Q8IZU2 1322 aa16.29■□□□□ 0.2
LRRFIP1-203ENST00000308482 TRPM3Q9HCF6 1732 aaPredicted RBP16.29■□□□□ 0.2
LRRFIP1-203ENST00000308482 TTC26A0AVF1 554 aa16.28■□□□□ 0.2
LRRFIP1-203ENST00000308482 KCNJ18B7U540 433 aa16.28■□□□□ 0.2
LRRFIP1-203ENST00000308482 ZNF185O15231 689 aa16.28■□□□□ 0.2
LRRFIP1-203ENST00000308482 UBXN1Q04323 297 aa16.28■□□□□ 0.2
LRRFIP1-203ENST00000308482 KCNJ12Q14500 433 aa16.28■□□□□ 0.2
LRRFIP1-203ENST00000308482 EHD4Q9H223 541 aa16.28■□□□□ 0.2
LRRFIP1-203ENST00000308482 HERVK_113P62684 666 aa16.28■□□□□ 0.2
LRRFIP1-203ENST00000308482 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
LRRFIP1-203ENST00000308482 TCP11X2Q5H9J9 407 aa16.28■□□□□ 0.2
LRRFIP1-203ENST00000308482 VGLL2Q8N8G2 317 aa16.28■□□□□ 0.2
LRRFIP1-203ENST00000308482 GDAQ9Y2T3 454 aa16.28■□□□□ 0.2
LRRFIP1-203ENST00000308482 LRP6O75581 1613 aa16.28■□□□□ 0.2
LRRFIP1-203ENST00000308482 LRRC10BA6NIK2 292 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 PCCAP05165 728 aaPredicted RBP16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 TDO2P48775 406 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 STIM1Q13586 685 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 ALX1Q15699 326 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 NELFBQ8WX92 580 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 DRC1Q96MC2 740 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 KRT23Q9C075 422 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 CDHR2Q9BYE9 1310 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 TRIM49BA6NDI0 452 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 AGPSO00116 658 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 PES1O00541 588 aaKnown RBP16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 PKN1Q16512 942 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 CT47A1Q5JQC4 288 aaPredicted RBP16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 CCDC122Q5T0U0 273 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 LCORLQ8N3X6 602 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 COG1Q8WTW3 980 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 PPM1EQ8WY54 764 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 SMARCC1Q92922 1105 aaPredicted RBP16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 VIPAS39Q9H9C1 493 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 SAR1BQ9Y6B6 198 aa16.27■□□□□ 0.2
LRRFIP1-203ENST00000308482 FER1L4A9Z1Z3 1794 aa16.27■□□□□ 0.19
LRRFIP1-203ENST00000308482 TUBBP07437 444 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 CTR9Q6PD62 1173 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 ZBTB38Q8NAP3 1195 aaPredicted RBP16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 CNNM2Q9H8M5 875 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 ERICH2A1L162 156 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 PDE2AO00408 941 aaPredicted RBP16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 PSMD14O00487 310 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 PDE8BO95263 885 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 MRPS25P82663 173 aaKnown RBP16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 PAK1Q13153 545 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 SART3Q15020 963 aaKnown RBP16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 MIGA1Q8NAN2 632 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 BAZ2BQ9UIF8 2168 aaKnown RBP16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 RCCD1A6NED2 376 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 PTGDRQ13258 359 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 CTCFLQ8NI51 663 aaPredicted RBP16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 EEF2KMTQ96G04 330 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 KAT14Q9H8E8 782 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 GNL3LQ9NVN8 582 aaKnown RBP16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 SLC4A4Q9Y6R1 1079 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 DUSP10Q9Y6W6 482 aa16.26■□□□□ 0.19
LRRFIP1-203ENST00000308482 NID2Q14112 1375 aa16.25■□□□□ 0.19
LRRFIP1-203ENST00000308482 CHD4Q14839 1912 aa16.25■□□□□ 0.19
LRRFIP1-203ENST00000308482 KRT2P35908 639 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms