RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 MYL10Q9BUA6 226 aa31.79■■■□□ 2.68
HDAC3-201ENST00000305264 KLF18A0A0U1RQI7 1052 aa31.79■■■□□ 2.68
HDAC3-201ENST00000305264 PPIL2Q13356 520 aa31.79■■■□□ 2.68
HDAC3-201ENST00000305264 DGKZQ13574 1117 aa31.79■■■□□ 2.68
HDAC3-201ENST00000305264 TMTC2Q8N394 836 aa31.79■■■□□ 2.68
HDAC3-201ENST00000305264 TBC1D2Q9BYX2 928 aa31.79■■■□□ 2.68
HDAC3-201ENST00000305264 MTMR7Q9Y216 660 aa31.79■■■□□ 2.68
HDAC3-201ENST00000305264 RAB11FIP4Q86YS3 637 aa31.78■■■□□ 2.68
HDAC3-201ENST00000305264 ZNF654Q8IZM8 581 aa31.78■■■□□ 2.68
HDAC3-201ENST00000305264 CHMP4CQ96CF2 233 aa31.78■■■□□ 2.68
HDAC3-201ENST00000305264 WNK4Q96J92 1243 aa31.78■■■□□ 2.68
HDAC3-201ENST00000305264 USP17L10C9JJH3 530 aa31.77■■■□□ 2.68
HDAC3-201ENST00000305264 ANKRD1Q15327 319 aa31.77■■■□□ 2.68
HDAC3-201ENST00000305264 APOA5Q6Q788 366 aa31.77■■■□□ 2.68
HDAC3-201ENST00000305264 KIAA1683Q9H0B3 1180 aa31.77■■■□□ 2.68
HDAC3-201ENST00000305264 SH2D4AQ9H788 454 aa31.77■■■□□ 2.68
HDAC3-201ENST00000305264 BACE1P56817 501 aa31.77■■■□□ 2.68
HDAC3-201ENST00000305264 KIAA1755Q5JYT7 1200 aa31.77■■■□□ 2.68
HDAC3-201ENST00000305264 RGMBQ6NW40 437 aa31.77■■■□□ 2.68
HDAC3-201ENST00000305264 TPCN1Q9ULQ1 816 aa31.77■■■□□ 2.68
HDAC3-201ENST00000305264 SLC12A7Q9Y666 1083 aa31.77■■■□□ 2.68
HDAC3-201ENST00000305264 RAD21O60216 631 aa31.76■■■□□ 2.68
HDAC3-201ENST00000305264 ZNF157P51786 506 aaPredicted RBP31.76■■■□□ 2.68
HDAC3-201ENST00000305264 MKRN3Q13064 507 aaKnown RBP31.76■■■□□ 2.68
HDAC3-201ENST00000305264 RASAL3Q86YV0 1011 aa31.76■■■□□ 2.68
HDAC3-201ENST00000305264 CREBZFQ9NS37 354 aa31.76■■■□□ 2.68
HDAC3-201ENST00000305264 NAP1L2Q9ULW6 460 aaPredicted RBP31.76■■■□□ 2.68
HDAC3-201ENST00000305264 SYNPO2Q9UMS6 1093 aa31.76■■■□□ 2.68
HDAC3-201ENST00000305264 RXRAP19793 462 aa31.76■■■□□ 2.67
HDAC3-201ENST00000305264 EVCP57679 992 aa31.76■■■□□ 2.67
HDAC3-201ENST00000305264 CATIPQ7Z7H3 387 aa31.76■■■□□ 2.67
HDAC3-201ENST00000305264 VCPKMTQ9H867 229 aa31.76■■■□□ 2.67
HDAC3-201ENST00000305264 TROAPQ12815 778 aa31.75■■■□□ 2.67
HDAC3-201ENST00000305264 MICU3Q86XE3 530 aa31.75■■■□□ 2.67
HDAC3-201ENST00000305264 SPICE1Q8N0Z3 855 aa31.75■■■□□ 2.67
HDAC3-201ENST00000305264 GMCL1P1Q8NEA9 526 aa31.75■■■□□ 2.67
HDAC3-201ENST00000305264 KCNH4Q9UQ05 1017 aa31.75■■■□□ 2.67
HDAC3-201ENST00000305264 F5H6K3 240 aa31.74■■■□□ 2.67
HDAC3-201ENST00000305264 NDUFB10O96000 172 aa31.74■■■□□ 2.67
HDAC3-201ENST00000305264 HMGCS2P54868 508 aa31.74■■■□□ 2.67
HDAC3-201ENST00000305264 KLRC3Q07444 240 aa31.74■■■□□ 2.67
HDAC3-201ENST00000305264 IL27Q8NEV9 243 aa31.74■■■□□ 2.67
HDAC3-201ENST00000305264 GOPCQ9HD26 462 aa31.74■■■□□ 2.67
HDAC3-201ENST00000305264 LOC285556D6RIA3 1793 aa31.74■■■□□ 2.67
HDAC3-201ENST00000305264 GOLGA8BA8MQT2 603 aa31.74■■■□□ 2.67
HDAC3-201ENST00000305264 LARGE1O95461 756 aa31.74■■■□□ 2.67
HDAC3-201ENST00000305264 SPRYD7Q5W111 196 aa31.74■■■□□ 2.67
HDAC3-201ENST00000305264 EMILIN3Q9NT22 766 aa31.74■■■□□ 2.67
HDAC3-201ENST00000305264 NUP133Q8WUM0 1156 aa31.73■■■□□ 2.67
HDAC3-201ENST00000305264 DDAH1O94760 285 aa31.72■■■□□ 2.67
HDAC3-201ENST00000305264 SLFN13Q68D06 897 aa31.72■■■□□ 2.67
HDAC3-201ENST00000305264 HHIPL1Q96JK4 782 aa31.72■■■□□ 2.67
HDAC3-201ENST00000305264 HPS5Q9UPZ3 1129 aa31.72■■■□□ 2.67
HDAC3-201ENST00000305264 ZBTB43O43298 467 aa31.72■■■□□ 2.67
HDAC3-201ENST00000305264 PDHBP11177 359 aa31.72■■■□□ 2.67
HDAC3-201ENST00000305264 PDIA3P30101 505 aaKnown RBP31.72■■■□□ 2.67
HDAC3-201ENST00000305264 CCDC144CPQ8IYA2 1237 aa31.72■■■□□ 2.67
HDAC3-201ENST00000305264 LIMCH1Q9UPQ0 1083 aa31.72■■■□□ 2.67
HDAC3-201ENST00000305264 A0A0G2JLL6 359 aaPredicted RBP31.71■■■□□ 2.67
HDAC3-201ENST00000305264 CXCL11O14625 94 aa31.71■■■□□ 2.67
HDAC3-201ENST00000305264 ZBTB48P10074 688 aaPredicted RBP31.71■■■□□ 2.67
HDAC3-201ENST00000305264 USP14P54578 494 aa31.71■■■□□ 2.67
HDAC3-201ENST00000305264 PRRT2Q7Z6L0 340 aaPredicted RBP31.71■■■□□ 2.67
HDAC3-201ENST00000305264 NUP88Q99567 741 aaPredicted RBP31.71■■■□□ 2.67
HDAC3-201ENST00000305264 C19orf81C9J6K1 198 aa31.7■■■□□ 2.67
HDAC3-201ENST00000305264 SLC10A3P09131 477 aa31.7■■■□□ 2.67
HDAC3-201ENST00000305264 STK3Q13188 491 aa31.7■■■□□ 2.67
HDAC3-201ENST00000305264 ME3Q16798 604 aa31.7■■■□□ 2.67
HDAC3-201ENST00000305264 SH3D19Q5HYK7 790 aa31.7■■■□□ 2.67
HDAC3-201ENST00000305264 USP17L2Q6R6M4 530 aa31.7■■■□□ 2.67
HDAC3-201ENST00000305264 SYNE3Q6ZMZ3 975 aa31.7■■■□□ 2.67
HDAC3-201ENST00000305264 SNHG28P0DPA3 235 aa31.7■■■□□ 2.66
HDAC3-201ENST00000305264 ZNF274Q96GC6 653 aaPredicted RBP31.7■■■□□ 2.66
HDAC3-201ENST00000305264 C12orf42Q96LP6 360 aa31.69■■■□□ 2.66
HDAC3-201ENST00000305264 FAM155AB1AL88 458 aaPredicted RBP31.68■■■□□ 2.66
HDAC3-201ENST00000305264 VCAM1P19320 739 aa31.68■■■□□ 2.66
HDAC3-201ENST00000305264 HTRA3P83110 453 aa31.68■■■□□ 2.66
HDAC3-201ENST00000305264 SNAPC2Q13487 334 aa31.68■■■□□ 2.66
HDAC3-201ENST00000305264 PAXIP1Q6ZW49 1069 aaPredicted RBP31.68■■■□□ 2.66
HDAC3-201ENST00000305264 LPAR1Q92633 364 aa31.68■■■□□ 2.66
HDAC3-201ENST00000305264 GMCL1Q96IK5 515 aa31.68■■■□□ 2.66
HDAC3-201ENST00000305264 RASSF10A6NK89 507 aa31.68■■■□□ 2.66
HDAC3-201ENST00000305264 GOLGA8AA7E2F4 631 aa31.68■■■□□ 2.66
HDAC3-201ENST00000305264 SLC1A4P43007 532 aa31.68■■■□□ 2.66
HDAC3-201ENST00000305264 METAP2P50579 478 aaKnown RBP eCLIP31.68■■■□□ 2.66
HDAC3-201ENST00000305264 GRM4Q14833 912 aa31.68■■■□□ 2.66
HDAC3-201ENST00000305264 SNX21Q969T3 373 aa31.68■■■□□ 2.66
HDAC3-201ENST00000305264 MS4A4AQ96JQ5 239 aa31.68■■■□□ 2.66
HDAC3-201ENST00000305264 FRMPD2Q68DX3 1309 aaPredicted RBP31.68■■■□□ 2.66
HDAC3-201ENST00000305264 NID2Q14112 1375 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 CALM1P0DP23 149 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 CALM2P0DP24 149 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 CALM3P0DP25 149 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 MCM2P49736 904 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 CCT2P78371 535 aaKnown RBP31.67■■■□□ 2.66
HDAC3-201ENST00000305264 CYP4F22Q6NT55 531 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 DCAF4Q8WV16 495 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 TMOD4Q9NZQ9 345 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 GOLGA8HP0CJ92 632 aa31.67■■■□□ 2.66
HDAC3-201ENST00000305264 RCAN1P53805 252 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms