RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 TAB2Q9NYJ8 693 aa12.27□□□□□ -0.45
ZNF558-201ENST00000301475 SAR1BQ9Y6B6 198 aa12.27□□□□□ -0.45
ZNF558-201ENST00000301475 EPN1Q9Y6I3 576 aaPredicted RBP12.27□□□□□ -0.45
ZNF558-201ENST00000301475 FAM205CA6NFA0 338 aa12.27□□□□□ -0.45
ZNF558-201ENST00000301475 HERVK_113P62684 666 aa12.27□□□□□ -0.45
ZNF558-201ENST00000301475 SGMS1Q86VZ5 419 aa12.27□□□□□ -0.45
ZNF558-201ENST00000301475 CXorf56Q9H5V9 222 aa12.27□□□□□ -0.45
ZNF558-201ENST00000301475 KIF1AQ12756 1690 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 TMEM67Q5HYA8 995 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 TTC19Q6DKK2 380 aaPredicted RBP12.26□□□□□ -0.45
ZNF558-201ENST00000301475 GLI3P10071 1580 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 AKAP11Q9UKA4 1901 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 GOLGA6BA6NDN3 693 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 ZNF185O15231 689 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 EIF3HO15372 352 aaKnown RBP eCLIP12.26□□□□□ -0.45
ZNF558-201ENST00000301475 CIAO1O76071 339 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 A1BGP04217 495 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 MCM3P25205 808 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 MNAT1P51948 309 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 COPB1P53618 953 aaKnown RBP12.26□□□□□ -0.45
ZNF558-201ENST00000301475 NBPF14Q5TI25 921 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 PAPD7Q5XG87 772 aaKnown RBP12.26□□□□□ -0.45
ZNF558-201ENST00000301475 CCNI2Q6ZMN8 369 aaPredicted RBP12.26□□□□□ -0.45
ZNF558-201ENST00000301475 CMTR1Q8N1G2 835 aaKnown RBP12.26□□□□□ -0.45
ZNF558-201ENST00000301475 CCDC82Q8N4S0 544 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 STAMQ92783 540 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 CEP126Q9P2H0 1117 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 LIMA1Q9UHB6 759 aaKnown RBP12.26□□□□□ -0.45
ZNF558-201ENST00000301475 RGPD5Q99666 1765 aa12.26□□□□□ -0.45
ZNF558-201ENST00000301475 PPFIA1Q13136 1202 aa12.25□□□□□ -0.45
ZNF558-201ENST00000301475 SAFBQ15424 915 aaKnown RBP eCLIP12.25□□□□□ -0.45
ZNF558-201ENST00000301475 RRP36Q96EU6 259 aaKnown RBP12.25□□□□□ -0.45
ZNF558-201ENST00000301475 TMEM87BQ96K49 555 aa12.25□□□□□ -0.45
ZNF558-201ENST00000301475 CAPS2Q9BXY5 557 aa12.25□□□□□ -0.45
ZNF558-201ENST00000301475 FOXP1Q9H334 677 aaPredicted RBP12.25□□□□□ -0.45
ZNF558-201ENST00000301475 MYH13Q9UKX3 1938 aa12.25□□□□□ -0.45
ZNF558-201ENST00000301475 SAMM50Q9Y512 469 aa12.25□□□□□ -0.45
ZNF558-201ENST00000301475 CSB-PGBD3P0DP91 1061 aa12.25□□□□□ -0.45
ZNF558-201ENST00000301475 IFNAR1P17181 557 aa12.25□□□□□ -0.45
ZNF558-201ENST00000301475 GNGT1P63211 74 aa12.25□□□□□ -0.45
ZNF558-201ENST00000301475 TTLL7Q6ZT98 887 aa12.25□□□□□ -0.45
ZNF558-201ENST00000301475 AENQ8WTP8 325 aaKnown RBP12.25□□□□□ -0.45
ZNF558-201ENST00000301475 JAKMIP2Q96AA8 810 aa12.25□□□□□ -0.45
ZNF558-201ENST00000301475 CWC25Q9NXE8 425 aaPredicted RBP12.25□□□□□ -0.45
ZNF558-201ENST00000301475 TACC3Q9Y6A5 838 aa12.25□□□□□ -0.45
ZNF558-201ENST00000301475 LRRC10BA6NIK2 292 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 C2orf54Q08AI8 447 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 CNPY4Q8N129 248 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 SYMPKQ92797 1274 aaKnown RBP12.24□□□□□ -0.45
ZNF558-201ENST00000301475 SHISA4Q96DD7 197 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 SH3GL2Q99962 352 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 CABP5Q9NP86 173 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 NLRP2Q9NX02 1062 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 SLC12A7Q9Y666 1083 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 CHD4Q14839 1912 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 NUP188Q5SRE5 1749 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 TTC26A0AVF1 554 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 RCCD1A6NED2 376 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 WNT7AO00755 349 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 APPP05067 770 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 INPP5BP32019 993 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 EZH2Q15910 746 aaKnown RBP12.24□□□□□ -0.45
ZNF558-201ENST00000301475 CCDC122Q5T0U0 273 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 ANKRD20A12PQ8NF67 263 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 GSDMAQ96QA5 445 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 HAUS4Q9H6D7 363 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 GNL3LQ9NVN8 582 aaKnown RBP12.24□□□□□ -0.45
ZNF558-201ENST00000301475 AATFQ9NY61 560 aaKnown RBP eCLIP12.24□□□□□ -0.45
ZNF558-201ENST00000301475 LRP6O75581 1613 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 NBPF26B4DH59 902 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 ADD2P35612 726 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 MAP2K2P36507 400 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 MCAMP43121 646 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 NBPF10Q6P3W6 841 aaKnown RBP12.24□□□□□ -0.45
ZNF558-201ENST00000301475 NBPF15Q8N660 670 aa12.24□□□□□ -0.45
ZNF558-201ENST00000301475 ATRNO75882 1429 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 XDHP47989 1333 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 PHKG2P15735 406 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 TRIM14Q14142 442 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 EARS2Q5JPH6 523 aaKnown RBP12.23□□□□□ -0.45
ZNF558-201ENST00000301475 WDR59Q6PJI9 974 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 TTC5Q8N0Z6 440 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 PRPF38AQ8NAV1 312 aaKnown RBP12.23□□□□□ -0.45
ZNF558-201ENST00000301475 LACRTQ9GZZ8 138 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 BLZF1Q9H2G9 400 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 MYH6P13533 1939 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 CKAP4Q07065 602 aaKnown RBP12.23□□□□□ -0.45
ZNF558-201ENST00000301475 TCP11X2Q5H9J9 407 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 SND1Q7KZF4 910 aaKnown RBP eCLIP12.23□□□□□ -0.45
ZNF558-201ENST00000301475 POTEDQ86YR6 584 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 CAGE1Q8TC20 777 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 HDAC7Q8WUI4 952 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 RPGRIP1Q96KN7 1286 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 ZSWIM5Q9P217 1185 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 FAM184BQ9ULE4 1060 aa12.23□□□□□ -0.45
ZNF558-201ENST00000301475 SHTN1A0MZ66 631 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 KCNJ18B7U540 433 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 MYO1FO00160 1098 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 IFIT3O14879 490 aaKnown RBP12.22□□□□□ -0.45
ZNF558-201ENST00000301475 LIFRP42702 1097 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms