RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 PARP14Q460N5 1801 aa7.1□□□□□ -1.27
SSX3-201ENST00000298396 DDTLA6NHG4 134 aaPredicted RBP7.09□□□□□ -1.27
SSX3-201ENST00000298396 CYP2D6P10635 497 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 TCP10Q12799 353 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 RASA3Q14644 834 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 PLA2G2CQ5R387 149 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 ZSCAN25Q6NSZ9 544 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 CWC27Q6UX04 472 aaKnown RBP7.09□□□□□ -1.27
SSX3-201ENST00000298396 KRT26Q7Z3Y9 468 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 TICAM2Q86XR7 235 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 APOBEC3FQ8IUX4 373 aaKnown RBP7.09□□□□□ -1.27
SSX3-201ENST00000298396 MAPKAPK5Q8IW41 473 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 TGFBRAP1Q8WUH2 860 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 CDCA5Q96FF9 252 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 OSBPL5Q9H0X9 879 aaPredicted RBP7.09□□□□□ -1.27
SSX3-201ENST00000298396 DEFB129Q9H1M3 183 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 DNAJC18Q9H819 358 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 HELLSQ9NRZ9 838 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 FZD1Q9UP38 647 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 TACC3Q9Y6A5 838 aa7.09□□□□□ -1.27
SSX3-201ENST00000298396 CCDC171Q6TFL3 1326 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 CYP2D7A0A087X1C5 515 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 SGSM2O43147 1006 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 TOMM70O94826 608 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 PTH1RQ03431 593 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 PICALMQ13492 652 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 MCMDC2Q4G0Z9 681 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 NBPF12Q5TAG4 269 aaPredicted RBP7.08□□□□□ -1.28
SSX3-201ENST00000298396 CST9Q5W186 159 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 FAM83AQ86UY5 434 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 EPS8L1Q8TE68 723 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 FAM151AQ8WW52 585 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 EMID1Q96A84 441 aaPredicted RBP7.08□□□□□ -1.28
SSX3-201ENST00000298396 AIDAQ96BJ3 306 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 DCPSQ96C86 337 aaKnown RBP7.08□□□□□ -1.28
SSX3-201ENST00000298396 DCP1AQ9NPI6 582 aaPredicted RBP7.08□□□□□ -1.28
SSX3-201ENST00000298396 MAP10Q9P2G4 905 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 SAP30BPQ9UHR5 308 aaKnown RBP7.08□□□□□ -1.28
SSX3-201ENST00000298396 SLC4A4Q9Y6R1 1079 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 THSD7BQ9C0I4 1608 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 LOC285556D6RIA3 1793 aa7.08□□□□□ -1.28
SSX3-201ENST00000298396 RLFQ13129 1914 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 FAM196BA6NMK8 535 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 MYO1BO43795 1136 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 ENTPD3O75355 529 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 CDC45O75419 566 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 BAG3O95817 575 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 HSPD1P10809 573 aaKnown RBP7.07□□□□□ -1.28
SSX3-201ENST00000298396 RPIAP49247 311 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 PLCD1P51178 756 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 MAP3K10Q02779 954 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 RRP1BQ14684 758 aaKnown RBP7.07□□□□□ -1.28
SSX3-201ENST00000298396 NR6A1Q15406 480 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 SLC4A8Q2Y0W8 1093 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 PTCRAQ6ISU1 281 aaPredicted RBP7.07□□□□□ -1.28
SSX3-201ENST00000298396 CTR9Q6PD62 1173 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 MOB2Q70IA6 237 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 CDC37L1Q7L3B6 337 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 METTL16Q86W50 562 aaKnown RBP7.07□□□□□ -1.28
SSX3-201ENST00000298396 SMC1BQ8NDV3 1235 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 TSC1Q92574 1164 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 GPKOWQ92917 476 aaPredicted RBP eCLIP7.07□□□□□ -1.28
SSX3-201ENST00000298396 ESYT1Q9BSJ8 1104 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 CRNKL1Q9BZJ0 848 aaKnown RBP7.07□□□□□ -1.28
SSX3-201ENST00000298396 LSG1Q9H089 658 aaKnown RBP7.07□□□□□ -1.28
SSX3-201ENST00000298396 DIAPH3Q9NSV4 1193 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 PALD1Q9ULE6 856 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 TAF6LQ9Y6J9 622 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 ROBO3Q96MS0 1386 aa7.07□□□□□ -1.28
SSX3-201ENST00000298396 SMCHD1A6NHR9 2005 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 RAD50Q92878 1312 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 PATL2C9JE40 543 aaKnown RBP7.06□□□□□ -1.28
SSX3-201ENST00000298396 HIP1O00291 1037 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 USP5P45974 858 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 JAG1P78504 1218 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 GABPAQ06546 454 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 TNFAIP1Q13829 316 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 COL9A3Q14050 684 aaPredicted RBP7.06□□□□□ -1.28
SSX3-201ENST00000298396 ALX1Q15699 326 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 SHROOM1Q2M3G4 852 aaPredicted RBP7.06□□□□□ -1.28
SSX3-201ENST00000298396 C8orf34Q49A92 452 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 CERS3Q8IU89 383 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 IFNL3Q8IZI9 196 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 NOL10Q9BSC4 688 aaKnown RBP7.06□□□□□ -1.28
SSX3-201ENST00000298396 UNC93B1Q9H1C4 597 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 TMOD2Q9NZR1 351 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 FKBPLQ9UIM3 349 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 PPP2R3BQ9Y5P8 575 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 PCNTO95613 3336 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 CEP350Q5VT06 3117 aa7.06□□□□□ -1.28
SSX3-201ENST00000298396 COL11A1P12107 1806 aaPredicted RBP7.06□□□□□ -1.28
SSX3-201ENST00000298396 MYH6P13533 1939 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 ZMYM6O95789 1325 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 BAZ2BQ9UIF8 2168 aaKnown RBP7.05□□□□□ -1.28
SSX3-201ENST00000298396 PHF20L1A8MW92 1017 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 USP17L12C9JPN9 530 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 USP17L21D6R901 530 aa7.05□□□□□ -1.28
SSX3-201ENST00000298396 USP2O75604 605 aaPredicted RBP7.05□□□□□ -1.28
SSX3-201ENST00000298396 CELF2O95319 508 aaKnown RBP7.05□□□□□ -1.28
SSX3-201ENST00000298396 FGAP02671 866 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms