RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 NFIAQ12857 509 aa10.55□□□□□ -0.72
PDPN-201ENST00000294489 SRBD1Q8N5C6 995 aaKnown RBP10.55□□□□□ -0.72
PDPN-201ENST00000294489 CTCFLQ8NI51 663 aaPredicted RBP10.55□□□□□ -0.72
PDPN-201ENST00000294489 FAM200AQ8TCP9 573 aa10.55□□□□□ -0.72
PDPN-201ENST00000294489 ZBED3Q96IU2 234 aaPredicted RBP10.55□□□□□ -0.72
PDPN-201ENST00000294489 MAD2L2Q9UI95 211 aa10.55□□□□□ -0.72
PDPN-201ENST00000294489 ZNRF3Q9ULT6 936 aa10.55□□□□□ -0.72
PDPN-201ENST00000294489 PCDHAC2Q9Y5I4 1007 aa10.55□□□□□ -0.72
PDPN-201ENST00000294489 MORC2Q9Y6X9 1032 aaPredicted RBP10.55□□□□□ -0.72
PDPN-201ENST00000294489 SMARCA1P28370 1054 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 SLC39A14Q15043 492 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 FAM177A1Q8N128 213 aaPredicted RBP10.54□□□□□ -0.72
PDPN-201ENST00000294489 CMTR1Q8N1G2 835 aaKnown RBP10.54□□□□□ -0.72
PDPN-201ENST00000294489 PNMA1Q8ND90 353 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 AGBL3Q8NEM8 1001 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 TMEM47Q9BQJ4 181 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 FOXP1Q9H334 677 aaPredicted RBP10.54□□□□□ -0.72
PDPN-201ENST00000294489 GOLPH3LQ9H4A5 285 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 KAT14Q9H8E8 782 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 ZNF277Q9NRM2 450 aaPredicted RBP10.54□□□□□ -0.72
PDPN-201ENST00000294489 SERPINB13Q9UIV8 391 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 PALM3A6NDB9 673 aaPredicted RBP10.54□□□□□ -0.72
PDPN-201ENST00000294489 PSMD14O00487 310 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 CAVIN2O95810 425 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 SNW1Q13573 536 aaKnown RBP10.54□□□□□ -0.72
PDPN-201ENST00000294489 R3HDM1Q15032 1099 aaKnown RBP10.54□□□□□ -0.72
PDPN-201ENST00000294489 SH3BP5LQ7L8J4 393 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 NOSTRINQ8IVI9 506 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 DIS3L2Q8IYB7 885 aaKnown RBP10.54□□□□□ -0.72
PDPN-201ENST00000294489 ENGASEQ8NFI3 743 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 PHF20Q9BVI0 1012 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 MRVI1Q9Y6F6 885 aa10.54□□□□□ -0.72
PDPN-201ENST00000294489 PPP6R2O75170 966 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 KIF5BP33176 963 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 SLC4A8Q2Y0W8 1093 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 TATDN1Q6P1N9 297 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 ZFPM1Q8IX07 1006 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 USP25Q9UHP3 1055 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 TOP1P11387 765 aaKnown RBP10.53□□□□□ -0.72
PDPN-201ENST00000294489 PICALMQ13492 652 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 CFAP100Q494V2 611 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 LARGE2Q8N3Y3 721 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 LZTS2Q9BRK4 669 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 DNAJC18Q9H819 358 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 BTBD18B2RXH4 712 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 NFKBIEO00221 500 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 SNHG28P0DPA3 235 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 GNAQP50148 359 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 ANO6Q4KMQ2 910 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 FMR1NBQ8N0W7 255 aaPredicted RBP10.53□□□□□ -0.72
PDPN-201ENST00000294489 SDF4Q9BRK5 362 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 RRAGDQ9NQL2 400 aaPredicted RBP10.53□□□□□ -0.72
PDPN-201ENST00000294489 MTMR4Q9NYA4 1195 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 CCDC39Q9UFE4 941 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 KCNJ14Q9UNX9 436 aa10.53□□□□□ -0.72
PDPN-201ENST00000294489 A0A1B0GVL5 298 aa10.52□□□□□ -0.72
PDPN-201ENST00000294489 SPDYE2BA6NHP3 402 aa10.52□□□□□ -0.72
PDPN-201ENST00000294489 HLA-DOAP06340 250 aa10.52□□□□□ -0.72
PDPN-201ENST00000294489 PTMAP06454 111 aaKnown RBP10.52□□□□□ -0.72
PDPN-201ENST00000294489 SPDYE6P0CI01 402 aa10.52□□□□□ -0.72
PDPN-201ENST00000294489 CMA1P23946 247 aa10.52□□□□□ -0.72
PDPN-201ENST00000294489 NPY5RQ15761 445 aa10.52□□□□□ -0.72
PDPN-201ENST00000294489 PFKFB3Q16875 520 aaPredicted RBP10.52□□□□□ -0.72
PDPN-201ENST00000294489 SLC35G1Q2M3R5 365 aa10.52□□□□□ -0.72
PDPN-201ENST00000294489 RILPL1Q5EBL4 403 aa10.52□□□□□ -0.72
PDPN-201ENST00000294489 FKBP1CQ5VVH2 108 aa10.52□□□□□ -0.72
PDPN-201ENST00000294489 ZSCAN30Q86W11 494 aa10.52□□□□□ -0.72
PDPN-201ENST00000294489 TNFRSF25Q93038 417 aa10.52□□□□□ -0.72
PDPN-201ENST00000294489 CEP95Q96GE4 821 aa10.52□□□□□ -0.72
PDPN-201ENST00000294489 SH3GLB2Q9NR46 395 aa10.52□□□□□ -0.72
PDPN-201ENST00000294489 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.72
PDPN-201ENST00000294489 MSNP26038 577 aaKnown RBP10.52□□□□□ -0.73
PDPN-201ENST00000294489 PLCB2Q00722 1185 aa10.52□□□□□ -0.73
PDPN-201ENST00000294489 FOXP4Q8IVH2 680 aaPredicted RBP10.52□□□□□ -0.73
PDPN-201ENST00000294489 NIM1KQ8IY84 436 aa10.52□□□□□ -0.73
PDPN-201ENST00000294489 PRMT6Q96LA8 375 aaPredicted RBP10.52□□□□□ -0.73
PDPN-201ENST00000294489 CCDC17Q96LX7 622 aa10.52□□□□□ -0.73
PDPN-201ENST00000294489 SPZ1Q9BXG8 430 aa10.52□□□□□ -0.73
PDPN-201ENST00000294489 PI4KBQ9UBF8 816 aa10.52□□□□□ -0.73
PDPN-201ENST00000294489 V9GY48 417 aaPredicted RBP10.52□□□□□ -0.73
PDPN-201ENST00000294489 SBF1O95248 1867 aa10.52□□□□□ -0.73
PDPN-201ENST00000294489 DDTLA6NHG4 134 aaPredicted RBP10.51□□□□□ -0.73
PDPN-201ENST00000294489 ADCY5O95622 1261 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 AKR1B1P15121 316 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 MARCKSP29966 332 aaPredicted RBP10.51□□□□□ -0.73
PDPN-201ENST00000294489 NDUFA8P51970 172 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 PTPAQ15257 358 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 TAOK3Q9H2K8 898 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 BRMS1Q9HCU9 246 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.51□□□□□ -0.73
PDPN-201ENST00000294489 CNTNAP1P78357 1384 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 PPP4R3BQ5MIZ7 849 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 AXDND1Q5T1B0 1012 aaPredicted RBP10.51□□□□□ -0.73
PDPN-201ENST00000294489 CLCN1P35523 988 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 ZNF165P49910 485 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 CXCL9Q07325 125 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 ZRSR1Q15695 479 aaKnown RBP10.51□□□□□ -0.73
PDPN-201ENST00000294489 STX1AQ16623 288 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 SPDYE2Q495Y8 402 aa10.51□□□□□ -0.73
PDPN-201ENST00000294489 STAG2Q8N3U4 1231 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms