RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 GIMAP6Q6P9H5 292 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 PLEKHH3Q7Z736 793 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 USP6NLQ92738 828 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 ARHGEF10LQ9HCE6 1279 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 HOXC10Q9NYD6 342 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 BTBD7Q9P203 1132 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
SNF8-201ENST00000290330 M0R2C6 588 aa12.54□□□□□ -0.4
SNF8-201ENST00000290330 CAPN2P17655 700 aa12.54□□□□□ -0.4
SNF8-201ENST00000290330 HDAC1Q13547 482 aaPredicted RBP12.54□□□□□ -0.4
SNF8-201ENST00000290330 LRRFIP1Q32MZ4 808 aaKnown RBP12.54□□□□□ -0.4
SNF8-201ENST00000290330 MORN1Q5T089 497 aa12.54□□□□□ -0.4
SNF8-201ENST00000290330 ANKRD45Q5TZF3 282 aa12.54□□□□□ -0.4
SNF8-201ENST00000290330 LPAR1Q92633 364 aa12.54□□□□□ -0.4
SNF8-201ENST00000290330 GCC1Q96CN9 775 aa12.54□□□□□ -0.4
SNF8-201ENST00000290330 CRISPLD2Q9H0B8 497 aa12.54□□□□□ -0.4
SNF8-201ENST00000290330 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.54□□□□□ -0.4
SNF8-201ENST00000290330 SH2D4AQ9H788 454 aa12.54□□□□□ -0.4
SNF8-201ENST00000290330 VCPKMTQ9H867 229 aa12.54□□□□□ -0.4
SNF8-201ENST00000290330 KANSL2Q9H9L4 492 aa12.54□□□□□ -0.4
SNF8-201ENST00000290330 RPTORQ8N122 1335 aa12.54□□□□□ -0.4
SNF8-201ENST00000290330 SALL3Q9BXA9 1300 aa12.54□□□□□ -0.4
SNF8-201ENST00000290330 MYH7P12883 1935 aa12.54□□□□□ -0.4
SNF8-201ENST00000290330 BAZ2AQ9UIF9 1905 aaKnown RBP12.54□□□□□ -0.4
SNF8-201ENST00000290330 FARP2O94887 1054 aaPredicted RBP12.53□□□□□ -0.4
SNF8-201ENST00000290330 SLC34A2O95436 690 aa12.53□□□□□ -0.4
SNF8-201ENST00000290330 TFRCP02786 760 aaKnown RBP12.53□□□□□ -0.4
SNF8-201ENST00000290330 EEF2P13639 858 aaKnown RBP12.53□□□□□ -0.4
SNF8-201ENST00000290330 GNAT2P19087 354 aa12.53□□□□□ -0.4
SNF8-201ENST00000290330 RGS2P41220 211 aa12.53□□□□□ -0.4
SNF8-201ENST00000290330 MAP3K21Q5TCX8 1036 aa12.53□□□□□ -0.4
SNF8-201ENST00000290330 SPICE1Q8N0Z3 855 aa12.53□□□□□ -0.4
SNF8-201ENST00000290330 SEC62Q99442 399 aaKnown RBP12.53□□□□□ -0.4
SNF8-201ENST00000290330 FSD1Q9BTV5 496 aa12.53□□□□□ -0.4
SNF8-201ENST00000290330 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNF8-201ENST00000290330 TANGO6Q9C0B7 1094 aa12.53□□□□□ -0.4
SNF8-201ENST00000290330 EPB41L4AQ9HCS5 686 aaPredicted RBP12.53□□□□□ -0.4
SNF8-201ENST00000290330 HMX1Q9NP08 348 aaPredicted RBP12.53□□□□□ -0.4
SNF8-201ENST00000290330 SUPT16HQ9Y5B9 1047 aaKnown RBP12.53□□□□□ -0.4
SNF8-201ENST00000290330 PLXNB2O15031 1838 aa12.53□□□□□ -0.4
SNF8-201ENST00000290330 MINDY4BA8MYZ0 360 aa12.52□□□□□ -0.41
SNF8-201ENST00000290330 PATL2C9JE40 543 aaKnown RBP12.52□□□□□ -0.41
SNF8-201ENST00000290330 APPP05067 770 aa12.52□□□□□ -0.41
SNF8-201ENST00000290330 RASA1P20936 1047 aa12.52□□□□□ -0.41
SNF8-201ENST00000290330 PTPREP23469 700 aa12.52□□□□□ -0.41
SNF8-201ENST00000290330 DSG3P32926 999 aa12.52□□□□□ -0.41
SNF8-201ENST00000290330 MAP2K5Q13163 448 aa12.52□□□□□ -0.41
SNF8-201ENST00000290330 CCL14Q16627 93 aa12.52□□□□□ -0.41
SNF8-201ENST00000290330 ZMYM1Q5SVZ6 1142 aa12.52□□□□□ -0.41
SNF8-201ENST00000290330 WDR78Q5VTH9 848 aa12.52□□□□□ -0.41
SNF8-201ENST00000290330 TRMT44Q8IYL2 757 aaKnown RBP12.52□□□□□ -0.41
SNF8-201ENST00000290330 STK11IPQ8N1F8 1099 aa12.52□□□□□ -0.41
SNF8-201ENST00000290330 APBA2Q99767 749 aa12.52□□□□□ -0.41
SNF8-201ENST00000290330 CWC22Q9HCG8 908 aaKnown RBP12.52□□□□□ -0.41
SNF8-201ENST00000290330 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.41
SNF8-201ENST00000290330 ROBO3Q96MS0 1386 aa12.52□□□□□ -0.41
SNF8-201ENST00000290330 SLC15A5A6NIM6 579 aa12.51□□□□□ -0.41
SNF8-201ENST00000290330 WDR46O15213 610 aaKnown RBP12.51□□□□□ -0.41
SNF8-201ENST00000290330 FLOT1O75955 427 aa12.51□□□□□ -0.41
SNF8-201ENST00000290330 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
SNF8-201ENST00000290330 ZKSCAN1P17029 563 aaPredicted RBP12.51□□□□□ -0.41
SNF8-201ENST00000290330 TDO2P48775 406 aa12.51□□□□□ -0.41
SNF8-201ENST00000290330 ATP2B2Q01814 1243 aa12.51□□□□□ -0.41
SNF8-201ENST00000290330 AAMPQ13685 434 aa12.51□□□□□ -0.41
SNF8-201ENST00000290330 IFNL3Q8IZI9 196 aa12.51□□□□□ -0.41
SNF8-201ENST00000290330 DPF3Q92784 378 aa12.51□□□□□ -0.41
SNF8-201ENST00000290330 HTATIP2Q9BUP3 242 aa12.51□□□□□ -0.41
SNF8-201ENST00000290330 MOV10L1Q9BXT6 1211 aaKnown RBP12.51□□□□□ -0.41
SNF8-201ENST00000290330 MKNK2Q9HBH9 465 aa12.51□□□□□ -0.41
SNF8-201ENST00000290330 STAP2Q9UGK3 403 aa12.51□□□□□ -0.41
SNF8-201ENST00000290330 IVNS1ABPQ9Y6Y0 642 aa12.51□□□□□ -0.41
SNF8-201ENST00000290330 H0YGN5 161 aa12.5□□□□□ -0.41
SNF8-201ENST00000290330 PDE1AP54750 535 aa12.5□□□□□ -0.41
SNF8-201ENST00000290330 CACNB2Q08289 660 aaPredicted RBP12.5□□□□□ -0.41
SNF8-201ENST00000290330 GRB14Q14449 540 aa12.5□□□□□ -0.41
SNF8-201ENST00000290330 MB21D1Q8N884 522 aa12.5□□□□□ -0.41
SNF8-201ENST00000290330 SHCBP1Q8NEM2 672 aa12.5□□□□□ -0.41
SNF8-201ENST00000290330 ATG4CQ96DT6 458 aa12.5□□□□□ -0.41
SNF8-201ENST00000290330 NACAP1Q9BZK3 213 aa12.5□□□□□ -0.41
SNF8-201ENST00000290330 SPATC1LQ9H0A9 340 aa12.5□□□□□ -0.41
SNF8-201ENST00000290330 STRNO43815 780 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 PRDM1O75626 825 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 HOXC6P09630 235 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 ERCC3P19447 782 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 HABP4Q5JVS0 413 aaKnown RBP12.49□□□□□ -0.41
SNF8-201ENST00000290330 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 NPLOC4Q8TAT6 608 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 DIS3LQ8TF46 1054 aaKnown RBP12.49□□□□□ -0.41
SNF8-201ENST00000290330 EVI5LQ96CN4 794 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 PAWRQ96IZ0 340 aaKnown RBP12.49□□□□□ -0.41
SNF8-201ENST00000290330 ZNF287Q9HBT7 754 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 GOPCQ9HD26 462 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 FLRT1Q9NZU1 646 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 NYAP2Q9P242 653 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 OGDHLQ9ULD0 1010 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 ADAMTS5Q9UNA0 930 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 MYH8P13535 1937 aa12.49□□□□□ -0.41
SNF8-201ENST00000290330 IGKV6D-41A0A0C4DH26 115 aa12.48□□□□□ -0.41
SNF8-201ENST00000290330 FOXP2O15409 715 aa12.48□□□□□ -0.41
SNF8-201ENST00000290330 RAD21O60216 631 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms