RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 GUCY1A2P33402 732 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 APOBRQ0VD83 1088 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 GRM4Q14833 912 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 SCYL3Q8IZE3 742 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 FAM177A1Q8N128 213 aaPredicted RBP9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 DCAF4Q8WV16 495 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 CDCA5Q96FF9 252 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 CEP95Q96GE4 821 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 SNHG28P0DPA3 235 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 ZNF654Q8IZM8 581 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 ARHGEF10LQ9HCE6 1279 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 A0A0G2JMZ2 1700 aa9.81□□□□□ -0.84
PTPDC1-201ENST00000288976 GOLGA8BA8MQT2 603 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 H3BQV1 296 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 KIF5BP33176 963 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 IFFO2Q5TF58 517 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 USP48Q86UV5 1035 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 SMARCC2Q8TAQ2 1214 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 RRAGCQ9HB90 399 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 AS3MTQ9HBK9 375 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 PARP14Q460N5 1801 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 METAP2P50579 478 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 SLC4A8Q2Y0W8 1093 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 NBPF12Q5TAG4 269 aaPredicted RBP9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 CIZ1Q9ULV3 898 aaPredicted RBP9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 DDIT3P35638 169 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 IREB2P48200 963 aaKnown RBP9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 GNAQP50148 359 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 KLRG1Q96E93 195 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 TMEM47Q9BQJ4 181 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 WDR18Q9BV38 432 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 WDR70Q9NW82 654 aa9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 RBM27Q9P2N5 1060 aaKnown RBP9.8□□□□□ -0.84
PTPDC1-201ENST00000288976 HMGN5P82970 282 aaKnown RBP9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 ICA1Q05084 483 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 SCRN1Q12765 414 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 TROAPQ12815 778 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 ASPRV1Q53RT3 343 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 CHST3Q7LGC8 479 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 GMCL1Q96IK5 515 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 POLR2AP24928 1970 aaKnown RBP9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 GOLGA8AA7E2F4 631 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 LRRC2Q9BYS8 371 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 GOPCQ9HD26 462 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 ADM5C9JUS6 153 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 MPHOSPH10O00566 681 aaKnown RBP9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 PLA2G6O60733 806 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 LARGE1O95461 756 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 ST3GAL1Q11201 340 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 RRP1BQ14684 758 aaKnown RBP9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 EAPPQ56P03 285 aaPredicted RBP9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 PNMA1Q8ND90 353 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 KIF3AQ9Y496 699 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 RBBP6Q7Z6E9 1792 aaKnown RBP9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 USP14P54578 494 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 RTN1Q16799 776 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 CHADLQ6NUI6 762 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 CDAN1Q8IWY9 1227 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 TCEANC2Q96MN5 208 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 ZKSCAN3Q9BRR0 538 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 TMX2Q9Y320 296 aa9.79□□□□□ -0.84
PTPDC1-201ENST00000288976 PTPRFP10586 1907 aa9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 PPP1R12BO60237 982 aaPredicted RBP9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 NMT2O60551 498 aa9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 USP2O75604 605 aaPredicted RBP9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 GH2P01242 217 aa9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 FANCBQ8NB91 859 aa9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 USP17L5A8MUK1 530 aa9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 MAP3K9P80192 1104 aa9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 ARMC9Q7Z3E5 817 aa9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 hCG_1984214I3L0E3 225 aa9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 IFNAR1P17181 557 aa9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 GPATCH4Q5T3I0 446 aaKnown RBP9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 ZNF713Q8N859 430 aaPredicted RBP9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 CTCFLQ8NI51 663 aaPredicted RBP9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 MAD2L2Q9UI95 211 aa9.78□□□□□ -0.84
PTPDC1-201ENST00000288976 MYH15Q9Y2K3 1946 aa9.77□□□□□ -0.84
PTPDC1-201ENST00000288976 GDF11O95390 407 aa9.77□□□□□ -0.84
PTPDC1-201ENST00000288976 TMTC3Q6ZXV5 915 aa9.77□□□□□ -0.84
PTPDC1-201ENST00000288976 WASF1Q92558 559 aa9.77□□□□□ -0.84
PTPDC1-201ENST00000288976 LPAR1Q92633 364 aa9.77□□□□□ -0.84
PTPDC1-201ENST00000288976 C12orf42Q96LP6 360 aa9.77□□□□□ -0.84
PTPDC1-201ENST00000288976 SPZ1Q9BXG8 430 aa9.77□□□□□ -0.84
PTPDC1-201ENST00000288976 KIAA1683Q9H0B3 1180 aa9.77□□□□□ -0.84
PTPDC1-201ENST00000288976 SENP2Q9HC62 589 aa9.77□□□□□ -0.84
PTPDC1-201ENST00000288976 PICK1Q9NRD5 415 aa9.77□□□□□ -0.84
PTPDC1-201ENST00000288976 PALM3A6NDB9 673 aaPredicted RBP9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 FMNL1O95466 1100 aaPredicted RBP9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 EEF2P13639 858 aaKnown RBP9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 SEPT2Q15019 361 aa9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 TEX2Q8IWB9 1127 aa9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 NSUN7Q8NE18 718 aaKnown RBP9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 GPHNQ9NQX3 736 aaPredicted RBP9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 MYH6P13533 1939 aa9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 PARP1P09874 1014 aaKnown RBP9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 TRMT1LQ7Z2T5 733 aaKnown RBP9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 WRNIP1Q96S55 665 aa9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 RNF26Q9BY78 433 aaPredicted RBP9.77□□□□□ -0.85
PTPDC1-201ENST00000288976 FAM196BA6NMK8 535 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms