RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 SEMA3FQ13275 785 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 PFKFB3Q16875 520 aaPredicted RBP12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 TBC1D9BQ66K14 1250 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 SYT10Q6XYQ8 523 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 C3orf67Q6ZVT6 689 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 DZIP1Q86YF9 867 aaKnown RBP12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 PDILTQ8N807 584 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 IQUBQ8NA54 791 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 SYMPKQ92797 1274 aaKnown RBP12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 BAG1Q99933 345 aaPredicted RBP12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 SBF2Q86WG5 1849 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 A0A1B0GTH6 734 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 TSPY2A6NKD2 308 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 TPM1P09493 284 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 NLRP5P59047 1200 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 DGKHQ86XP1 1220 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 RMND1Q9NWS8 449 aa12.97□□□□□ -0.33
SIRPB1-202ENST00000279477 FMR1Q06787 632 aaKnown RBP eCLIP12.96□□□□□ -0.33
SIRPB1-202ENST00000279477 SPAG1Q07617 926 aa12.96□□□□□ -0.33
SIRPB1-202ENST00000279477 GALNT17Q6IS24 598 aa12.96□□□□□ -0.33
SIRPB1-202ENST00000279477 WDR66Q8TBY9 1149 aa12.96□□□□□ -0.33
SIRPB1-202ENST00000279477 PAGE5Q96GU1 130 aa12.96□□□□□ -0.33
SIRPB1-202ENST00000279477 PANX2Q96RD6 677 aa12.96□□□□□ -0.33
SIRPB1-202ENST00000279477 KAT14Q9H8E8 782 aa12.96□□□□□ -0.33
SIRPB1-202ENST00000279477 INTS13Q9NVM9 706 aa12.96□□□□□ -0.33
SIRPB1-202ENST00000279477 DNAI1Q9UI46 699 aa12.96□□□□□ -0.33
SIRPB1-202ENST00000279477 TMEM232C9JQI7 657 aa12.96□□□□□ -0.34
SIRPB1-202ENST00000279477 PRDM1O75626 825 aa12.96□□□□□ -0.34
SIRPB1-202ENST00000279477 DPYDQ12882 1025 aa12.96□□□□□ -0.34
SIRPB1-202ENST00000279477 CCDC93Q567U6 631 aa12.96□□□□□ -0.34
SIRPB1-202ENST00000279477 ANKRD20A12PQ8NF67 263 aa12.96□□□□□ -0.34
SIRPB1-202ENST00000279477 CCDC148Q8NFR7 591 aa12.96□□□□□ -0.34
SIRPB1-202ENST00000279477 ZNF384Q8TF68 577 aa12.96□□□□□ -0.34
SIRPB1-202ENST00000279477 ANKS1AQ92625 1134 aa12.96□□□□□ -0.34
SIRPB1-202ENST00000279477 ZNF287Q9HBT7 754 aa12.96□□□□□ -0.34
SIRPB1-202ENST00000279477 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.96□□□□□ -0.34
SIRPB1-202ENST00000279477 LY75O60449 1722 aa12.95□□□□□ -0.34
SIRPB1-202ENST00000279477 TAF1LQ8IZX4 1826 aa12.95□□□□□ -0.34
SIRPB1-202ENST00000279477 CYP2D7A0A087X1C5 515 aa12.95□□□□□ -0.34
SIRPB1-202ENST00000279477 KCNQ2O43526 872 aa12.95□□□□□ -0.34
SIRPB1-202ENST00000279477 LONP1P36776 959 aaKnown RBP12.95□□□□□ -0.34
SIRPB1-202ENST00000279477 BICDL1Q6ZP65 573 aa12.95□□□□□ -0.34
SIRPB1-202ENST00000279477 TMEM139Q8IV31 216 aa12.95□□□□□ -0.34
SIRPB1-202ENST00000279477 CCDC51Q96ER9 411 aa12.95□□□□□ -0.34
SIRPB1-202ENST00000279477 PPP2R2CQ9Y2T4 447 aa12.95□□□□□ -0.34
SIRPB1-202ENST00000279477 ITIH6Q6UXX5 1313 aa12.95□□□□□ -0.34
SIRPB1-202ENST00000279477 A0A0U1RQG5 324 aaPredicted RBP12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 BAG3O95817 575 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 PTGDRQ13258 359 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 CUL4BQ13620 913 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 NR1I3Q14994 352 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 NPY5RQ15761 445 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 VPS72Q15906 364 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 ZNF771Q7L3S4 317 aaPredicted RBP12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 PPFIBP1Q86W92 1011 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 SRBD1Q8N5C6 995 aaKnown RBP12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 SHISA4Q96DD7 197 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 ARGLU1Q9NWB6 273 aaPredicted RBP12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 DDX41Q9UJV9 622 aaKnown RBP12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 LEMD3Q9Y2U8 911 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 AKR1B15C9JRZ8 316 aaPredicted RBP12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 MYL1P05976 194 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 LDHCP07864 332 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 TRIM14Q14142 442 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 CDKAL1Q5VV42 579 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 REXO1L1PQ8IX06 675 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 TRMT44Q8IYL2 757 aaKnown RBP12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 GRAMD1CQ8IYS0 662 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 TC2NQ8N9U0 490 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 MNS1Q8NEH6 495 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 EPSTI1Q96J88 318 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 LZTS2Q9BRK4 669 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 TCP11L1Q9NUJ3 509 aa12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 RTCBQ9Y3I0 505 aaKnown RBP12.94□□□□□ -0.34
SIRPB1-202ENST00000279477 VWA3AA6NCI4 1184 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 FAM205CA6NFA0 338 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 NUTM2BA6NNL0 878 aaPredicted RBP12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 NUTM2EB1AL46 878 aaPredicted RBP12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 LAD1O00515 517 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 LDHBP07195 334 aaKnown RBP12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 PRDX5P30044 214 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 USP5P45974 858 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 ZNF174Q15697 407 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 ELF2Q15723 593 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 ZNF827Q17R98 1081 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 USP49Q70CQ1 688 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 CNGA4Q8IV77 575 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 DAGLBQ8NCG7 672 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 MCM9Q9NXL9 1143 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 TNRC6CQ9HCJ0 1690 aaKnown RBP12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 THSD7AQ9UPZ6 1657 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 AFMP43652 599 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 GRM4Q14833 912 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 EARS2Q5JPH6 523 aaKnown RBP12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 C12orf60Q5U649 245 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 TRIM65Q6PJ69 517 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 PIK3AP1Q6ZUJ8 805 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 ZNF804AQ7Z570 1209 aa12.93□□□□□ -0.34
SIRPB1-202ENST00000279477 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms