RNA–Protein interactions for RNA: ENST00000278916.7

CHEK1-201, Transcript of checkpoint kinase 1, humanhuman

TSL 5 BASIC

Gene CHEK1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-201ENST00000278916 TTLL1O95922 423 aa13.92□□□□□ -0.18
CHEK1-201ENST00000278916 HSPA8P11142 646 aaKnown RBP13.92□□□□□ -0.18
CHEK1-201ENST00000278916 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
CHEK1-201ENST00000278916 RPAP3Q9H6T3 665 aaPredicted RBP13.92□□□□□ -0.18
CHEK1-201ENST00000278916 NYAP2Q9P242 653 aa13.92□□□□□ -0.18
CHEK1-201ENST00000278916 CPA4Q9UI42 421 aa13.92□□□□□ -0.18
CHEK1-201ENST00000278916 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
CHEK1-201ENST00000278916 USP14P54578 494 aa13.91□□□□□ -0.18
CHEK1-201ENST00000278916 ADCK5Q3MIX3 580 aa13.91□□□□□ -0.18
CHEK1-201ENST00000278916 LRRC2Q9BYS8 371 aa13.91□□□□□ -0.18
CHEK1-201ENST00000278916 KRT23Q9C075 422 aa13.91□□□□□ -0.18
CHEK1-201ENST00000278916 TANGO6Q9C0B7 1094 aa13.91□□□□□ -0.18
CHEK1-201ENST00000278916 ASCC2Q9H1I8 757 aaPredicted RBP13.91□□□□□ -0.18
CHEK1-201ENST00000278916 VCPKMTQ9H867 229 aa13.91□□□□□ -0.18
CHEK1-201ENST00000278916 F5H6K3 240 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 CA12O43570 354 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 REC8O95072 547 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 NDUFB10O96000 172 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 CPA1P15085 419 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 KLRC3Q07444 240 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 TRDNQ13061 729 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 FAM83BQ5T0W9 1011 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 RCSD1Q6JBY9 416 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 RALYLQ86SE5 291 aaKnown RBP13.9□□□□□ -0.18
CHEK1-201ENST00000278916 TCEANC2Q96MN5 208 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 SENP2Q9HC62 589 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 GPHNQ9NQX3 736 aaPredicted RBP13.9□□□□□ -0.18
CHEK1-201ENST00000278916 FBXO28Q9NVF7 368 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 TNKSO95271 1327 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 ALDH1A1P00352 501 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 PCP11498 1178 aaKnown RBP13.9□□□□□ -0.18
CHEK1-201ENST00000278916 ANTXR2P58335 489 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 IRX3P78415 501 aaPredicted RBP13.9□□□□□ -0.18
CHEK1-201ENST00000278916 ENAHQ8N8S7 591 aaPredicted RBP13.9□□□□□ -0.18
CHEK1-201ENST00000278916 NCOA7Q8NI08 942 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 SMCR8Q8TEV9 937 aaPredicted RBP13.9□□□□□ -0.18
CHEK1-201ENST00000278916 C12orf42Q96LP6 360 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 P2RX7Q99572 595 aaKnown RBP13.9□□□□□ -0.18
CHEK1-201ENST00000278916 TMEM47Q9BQJ4 181 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 USP26Q9BXU7 913 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 SH2D4AQ9H788 454 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 CNNM2Q9H8M5 875 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 ZFYVE28Q9HCC9 887 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 GOPCQ9HD26 462 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 TSHZ2Q9NRE2 1034 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 SAGE1Q9NXZ1 904 aa13.9□□□□□ -0.18
CHEK1-201ENST00000278916 CASP8AP2Q9UKL3 1982 aa13.89□□□□□ -0.19
CHEK1-201ENST00000278916 ZSWIM8A7E2V4 1837 aa13.89□□□□□ -0.19
CHEK1-201ENST00000278916 MCCP23508 829 aa13.89□□□□□ -0.19
CHEK1-201ENST00000278916 CAP1Q01518 475 aa13.89□□□□□ -0.19
CHEK1-201ENST00000278916 POTEEQ6S8J3 1075 aa13.89□□□□□ -0.19
CHEK1-201ENST00000278916 MB21D2Q8IYB1 491 aaPredicted RBP13.89□□□□□ -0.19
CHEK1-201ENST00000278916 ZSCAN10Q96SZ4 725 aaPredicted RBP13.89□□□□□ -0.19
CHEK1-201ENST00000278916 PARK7Q99497 189 aaKnown RBP13.89□□□□□ -0.19
CHEK1-201ENST00000278916 UBAC1Q9BSL1 405 aa13.89□□□□□ -0.19
CHEK1-201ENST00000278916 GPR25O00155 361 aa13.88□□□□□ -0.19
CHEK1-201ENST00000278916 TLR2O60603 784 aa13.88□□□□□ -0.19
CHEK1-201ENST00000278916 HSPA4P34932 840 aa13.88□□□□□ -0.19
CHEK1-201ENST00000278916 CTCFP49711 727 aaPredicted RBP13.88□□□□□ -0.19
CHEK1-201ENST00000278916 RNF20Q5VTR2 975 aa13.88□□□□□ -0.19
CHEK1-201ENST00000278916 SLFN13Q68D06 897 aa13.88□□□□□ -0.19
CHEK1-201ENST00000278916 IQCA1Q86XH1 822 aa13.88□□□□□ -0.19
CHEK1-201ENST00000278916 ANKRD13CQ8N6S4 541 aa13.88□□□□□ -0.19
CHEK1-201ENST00000278916 ZNF296Q8WUU4 475 aaPredicted RBP13.88□□□□□ -0.19
CHEK1-201ENST00000278916 PAGR1Q9BTK6 254 aa13.88□□□□□ -0.19
CHEK1-201ENST00000278916 SNX14Q9Y5W7 946 aa13.88□□□□□ -0.19
CHEK1-201ENST00000278916 USP17L15C9J2P7 530 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 USP17L13C9JLJ4 530 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 USP17L11C9JVI0 530 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 USP17L18D6R9N7 530 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 USP17L22D6RA61 530 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 USP17L17D6RBQ6 530 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 USP17L19D6RCP7 530 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 USP17L20D6RJB6 530 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 FLOT1O75955 427 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 OSBPP22059 807 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 HERVK_113P62684 666 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 USP17L24Q0WX57 530 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 CATSPERGQ6ZRH7 1159 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 KCTD1Q719H9 257 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 MKL1Q969V6 931 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 ARHGAP39Q9C0H5 1083 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 TCP11L1Q9NUJ3 509 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 BRCA2P51587 3418 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 FRMPD2Q68DX3 1309 aaPredicted RBP13.87□□□□□ -0.19
CHEK1-201ENST00000278916 ADGRA2Q96PE1 1338 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 IFIT3O14879 490 aaKnown RBP13.87□□□□□ -0.19
CHEK1-201ENST00000278916 WDR46O15213 610 aaKnown RBP13.87□□□□□ -0.19
CHEK1-201ENST00000278916 PRC1O43663 620 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 HOXA7P31268 230 aaPredicted RBP13.87□□□□□ -0.19
CHEK1-201ENST00000278916 PABPC4Q13310 644 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHEK1-201ENST00000278916 LPAR1Q92633 364 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 JAKMIP1Q96N16 626 aaKnown RBP13.87□□□□□ -0.19
CHEK1-201ENST00000278916 TXNRD2Q9NNW7 524 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 PNMA3Q9UL41 463 aa13.87□□□□□ -0.19
CHEK1-201ENST00000278916 GOLGA8HP0CJ92 632 aa13.86□□□□□ -0.19
CHEK1-201ENST00000278916 TOP1P11387 765 aaKnown RBP13.86□□□□□ -0.19
CHEK1-201ENST00000278916 ZKSCAN1P17029 563 aaPredicted RBP13.86□□□□□ -0.19
CHEK1-201ENST00000278916 NOVP48745 357 aa13.86□□□□□ -0.19
CHEK1-201ENST00000278916 SEC23AQ15436 765 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms