RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 GOPCQ9HD26 462 aa18.31■□□□□ 0.52
ATP6V1C2-201ENST00000272238 PARP14Q460N5 1801 aa18.31■□□□□ 0.52
ATP6V1C2-201ENST00000272238 PDHXO00330 501 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 EPB41L2O43491 1005 aaKnown RBP18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 PRC1O43663 620 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 SH3D19Q5HYK7 790 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 SAMD1Q6SPF0 538 aaPredicted RBP18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 ENAHQ8N8S7 591 aaPredicted RBP18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 NUP88Q99567 741 aaPredicted RBP18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 BEGAINQ9BUH8 593 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 TANGO6Q9C0B7 1094 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 TSKSQ9UJT2 592 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 AGTPBP1Q9UPW5 1226 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 ERICH2A1L162 156 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 TESPA1A2RU30 521 aaPredicted RBP18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 IFIT3O14879 490 aaKnown RBP18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 CASTP20810 708 aaKnown RBP18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 MCM5P33992 734 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 TM4SF4P48230 202 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 INHBEP58166 350 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 RCSD1Q6JBY9 416 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 GPAT2Q6NUI2 795 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 TMEM47Q9BQJ4 181 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 RPAP3Q9H6T3 665 aaPredicted RBP18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 TCP11L1Q9NUJ3 509 aa18.3■□□□□ 0.52
ATP6V1C2-201ENST00000272238 TRPA1O75762 1119 aa18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 NDUFB10O96000 172 aa18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 CYP2C8P10632 490 aa18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 MAP2K1Q02750 393 aaPredicted RBP18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 SART3Q15020 963 aaKnown RBP18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 TAF1CQ15572 869 aaPredicted RBP18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 TMEM67Q5HYA8 995 aa18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 PPP4R3BQ5MIZ7 849 aa18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 IFIT1BQ5T764 474 aaKnown RBP18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 OTUD7BQ6GQQ9 843 aa18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 ANKRD23Q86SG2 305 aa18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 KCNB2Q92953 911 aa18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 KAT14Q9H8E8 782 aa18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 GPHNQ9NQX3 736 aaPredicted RBP18.29■□□□□ 0.52
ATP6V1C2-201ENST00000272238 F5H6K3 240 aa18.28■□□□□ 0.52
ATP6V1C2-201ENST00000272238 TOP1P11387 765 aaKnown RBP18.28■□□□□ 0.52
ATP6V1C2-201ENST00000272238 NT5C2P49902 561 aa18.28■□□□□ 0.52
ATP6V1C2-201ENST00000272238 KLRC3Q07444 240 aa18.28■□□□□ 0.52
ATP6V1C2-201ENST00000272238 FAM83BQ5T0W9 1011 aa18.28■□□□□ 0.52
ATP6V1C2-201ENST00000272238 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
ATP6V1C2-201ENST00000272238 C12orf42Q96LP6 360 aa18.28■□□□□ 0.52
ATP6V1C2-201ENST00000272238 SENP2Q9HC62 589 aa18.28■□□□□ 0.52
ATP6V1C2-201ENST00000272238 IRX3P78415 501 aaPredicted RBP18.27■□□□□ 0.52
ATP6V1C2-201ENST00000272238 CRHR2Q13324 411 aa18.27■□□□□ 0.52
ATP6V1C2-201ENST00000272238 WTAPQ15007 396 aa18.27■□□□□ 0.52
ATP6V1C2-201ENST00000272238 CCDC96Q2M329 555 aa18.27■□□□□ 0.52
ATP6V1C2-201ENST00000272238 TSGA10IPQ3SY00 556 aa18.27■□□□□ 0.52
ATP6V1C2-201ENST00000272238 SLFN13Q68D06 897 aa18.27■□□□□ 0.52
ATP6V1C2-201ENST00000272238 BLOC1S2Q6QNY1 142 aa18.27■□□□□ 0.52
ATP6V1C2-201ENST00000272238 SMCR8Q8TEV9 937 aaPredicted RBP18.27■□□□□ 0.52
ATP6V1C2-201ENST00000272238 LPAR1Q92633 364 aa18.27■□□□□ 0.52
ATP6V1C2-201ENST00000272238 UPF3BQ9BZI7 483 aaKnown RBP18.27■□□□□ 0.52
ATP6V1C2-201ENST00000272238 UPF2Q9HAU5 1272 aaKnown RBP18.27■□□□□ 0.52
ATP6V1C2-201ENST00000272238 RNF186Q9NXI6 227 aa18.27■□□□□ 0.52
ATP6V1C2-201ENST00000272238 FGD1P98174 961 aa18.26■□□□□ 0.51
ATP6V1C2-201ENST00000272238 CCDC178Q5BJE1 867 aa18.26■□□□□ 0.51
ATP6V1C2-201ENST00000272238 DGKHQ86XP1 1220 aa18.26■□□□□ 0.51
ATP6V1C2-201ENST00000272238 JMYQ8N9B5 988 aa18.26■□□□□ 0.51
ATP6V1C2-201ENST00000272238 PNMA1Q8ND90 353 aa18.26■□□□□ 0.51
ATP6V1C2-201ENST00000272238 GMCL1P1Q8NEA9 526 aa18.26■□□□□ 0.51
ATP6V1C2-201ENST00000272238 MKL1Q969V6 931 aa18.26■□□□□ 0.51
ATP6V1C2-201ENST00000272238 PARK7Q99497 189 aaKnown RBP18.26■□□□□ 0.51
ATP6V1C2-201ENST00000272238 COL11A1P12107 1806 aaPredicted RBP18.26■□□□□ 0.51
ATP6V1C2-201ENST00000272238 A0A0G2JMZ2 1700 aa18.26■□□□□ 0.51
ATP6V1C2-201ENST00000272238 WDR46O15213 610 aaKnown RBP18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 TBC1D8O95759 1140 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 PSMA5P28066 241 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 PABPC4Q13310 644 aaKnown RBP eCLIP18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 SEC23AQ15436 765 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 ASCC2Q9H1I8 757 aaPredicted RBP18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 RLFQ13129 1914 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 FRMPD2Q68DX3 1309 aaPredicted RBP18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 SH2B2O14492 632 aaPredicted RBP18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 FLOT1O75955 427 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 ECM2O94769 699 aaPredicted RBP18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 ALDH1A1P00352 501 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 HSPA1AP0DMV8 641 aaKnown RBP18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 HSPA1BP0DMV9 641 aaKnown RBP18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 SLC1A4P43007 532 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 NOVP48745 357 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 NFXL1Q6ZNB6 911 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 KCTD1Q719H9 257 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 DHX32Q7L7V1 743 aaKnown RBP18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 RAB11FIP4Q86YS3 637 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 TTC14Q96N46 770 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 MYL10Q9BUA6 226 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 BACH2Q9BYV9 841 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 C22orf23Q9BZE7 217 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 LY9Q9HBG7 655 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 WBP1LQ9NX94 342 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 PNMA3Q9UL41 463 aa18.25■□□□□ 0.51
ATP6V1C2-201ENST00000272238 ZSWIM8A7E2V4 1837 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 USP17L15C9J2P7 530 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 USP17L13C9JLJ4 530 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 USP17L11C9JVI0 530 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms