RNA–Protein interactions for RNA: ENST00000272163.8

LBR-201, Transcript of lamin B receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LBR, Length 3,745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-201ENST00000272163 EHD4Q9H223 541 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 VCPKMTQ9H867 229 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 PTPDC1A2A3K4 754 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 INHAP05111 366 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 ERVK-9P63128 1117 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 ERVK-24P63145 666 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 PUS7LQ9H0K6 701 aaKnown RBP9.67□□□□□ -0.86
LBR-201ENST00000272163 AP5M1Q9H0R1 490 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 SLC25A27O95847 323 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 FAM83BQ5T0W9 1011 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 GIMAP6Q6P9H5 292 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 PTPN18Q99952 460 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 SLF1Q9BQI6 1058 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 NBPF3Q9H094 633 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 ZNF112Q9UJU3 913 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 PNMA2Q9UL42 364 aa9.67□□□□□ -0.86
LBR-201ENST00000272163 CCL5P13501 91 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 NOM1Q5C9Z4 860 aaKnown RBP9.66□□□□□ -0.86
LBR-201ENST00000272163 C12orf60Q5U649 245 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 PRPF38AQ8NAV1 312 aaKnown RBP9.66□□□□□ -0.86
LBR-201ENST00000272163 MS4A4AQ96JQ5 239 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 KRT23Q9C075 422 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 KIAA1683Q9H0B3 1180 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 R3HDMLQ9H3Y0 253 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 IFIT3O14879 490 aaKnown RBP9.66□□□□□ -0.86
LBR-201ENST00000272163 VCAM1P19320 739 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 TREML2Q5T2D2 321 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 SNRNP48Q6IEG0 339 aaKnown RBP9.66□□□□□ -0.86
LBR-201ENST00000272163 CCDC129Q6ZRS4 1044 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 STRBPQ96SI9 672 aaKnown RBP9.66□□□□□ -0.86
LBR-201ENST00000272163 CCDC69A6NI79 296 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 HDAC1Q13547 482 aaPredicted RBP9.66□□□□□ -0.86
LBR-201ENST00000272163 CPLX2Q6PUV4 134 aaKnown RBP9.66□□□□□ -0.86
LBR-201ENST00000272163 FAM160B2Q86V87 743 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 CTCFLQ8NI51 663 aaPredicted RBP9.66□□□□□ -0.86
LBR-201ENST00000272163 PIBF1Q8WXW3 757 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 CNNM2Q9H8M5 875 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 CEP290O15078 2479 aa9.66□□□□□ -0.86
LBR-201ENST00000272163 F5H6K3 240 aa9.65□□□□□ -0.86
LBR-201ENST00000272163 CTDSPL2Q05D32 466 aa9.65□□□□□ -0.86
LBR-201ENST00000272163 KLRC3Q07444 240 aa9.65□□□□□ -0.86
LBR-201ENST00000272163 NMIQ13287 307 aaPredicted RBP9.65□□□□□ -0.86
LBR-201ENST00000272163 SH3BP5LQ7L8J4 393 aa9.65□□□□□ -0.86
LBR-201ENST00000272163 CUL5Q93034 780 aa9.65□□□□□ -0.86
LBR-201ENST00000272163 SLC45A1Q9Y2W3 748 aa9.65□□□□□ -0.86
LBR-201ENST00000272163 STRNO43815 780 aa9.65□□□□□ -0.86
LBR-201ENST00000272163 PRKAR2AP13861 404 aaKnown RBP9.65□□□□□ -0.86
LBR-201ENST00000272163 ATN1P54259 1190 aaPredicted RBP9.65□□□□□ -0.86
LBR-201ENST00000272163 FAM47CQ5HY64 1035 aa9.65□□□□□ -0.86
LBR-201ENST00000272163 OSBP2Q969R2 916 aa9.65□□□□□ -0.86
LBR-201ENST00000272163 ATG4CQ96DT6 458 aa9.65□□□□□ -0.86
LBR-201ENST00000272163 TEX13BQ9BXU2 312 aa9.65□□□□□ -0.86
LBR-201ENST00000272163 ARHGAP39Q9C0H5 1083 aa9.65□□□□□ -0.86
LBR-201ENST00000272163 MROH8Q9H579 483 aa9.65□□□□□ -0.86
LBR-201ENST00000272163 SEC63Q9UGP8 760 aaKnown RBP9.65□□□□□ -0.86
LBR-201ENST00000272163 MARCH6O60337 910 aa9.65□□□□□ -0.87
LBR-201ENST00000272163 MSCO60682 206 aa9.65□□□□□ -0.87
LBR-201ENST00000272163 FDX1P10109 184 aa9.65□□□□□ -0.87
LBR-201ENST00000272163 RARBP10826 455 aa9.65□□□□□ -0.87
LBR-201ENST00000272163 STAT2P52630 851 aa9.65□□□□□ -0.87
LBR-201ENST00000272163 IFIT1BQ5T764 474 aaKnown RBP9.65□□□□□ -0.87
LBR-201ENST00000272163 UPF2Q9HAU5 1272 aaKnown RBP9.65□□□□□ -0.87
LBR-201ENST00000272163 CCPG1Q9ULG6 757 aa9.65□□□□□ -0.87
LBR-201ENST00000272163 CCDC171Q6TFL3 1326 aa9.64□□□□□ -0.87
LBR-201ENST00000272163 ZEB2O60315 1214 aa9.64□□□□□ -0.87
LBR-201ENST00000272163 ERCC3P19447 782 aa9.64□□□□□ -0.87
LBR-201ENST00000272163 C17orf99Q6UX52 265 aa9.64□□□□□ -0.87
LBR-201ENST00000272163 ADGRA1Q86SQ6 560 aa9.64□□□□□ -0.87
LBR-201ENST00000272163 HOMER1Q86YM7 354 aa9.64□□□□□ -0.87
LBR-201ENST00000272163 SIRT2Q8IXJ6 389 aa9.64□□□□□ -0.87
LBR-201ENST00000272163 OTUD7AQ8TE49 926 aaPredicted RBP9.64□□□□□ -0.87
LBR-201ENST00000272163 U2AF1L4Q8WU68 220 aaKnown RBP9.64□□□□□ -0.87
LBR-201ENST00000272163 SEC62Q99442 399 aaKnown RBP9.64□□□□□ -0.87
LBR-201ENST00000272163 ADD3Q9UEY8 706 aaKnown RBP9.64□□□□□ -0.87
LBR-201ENST00000272163 DICER1Q9UPY3 1922 aaKnown RBP9.64□□□□□ -0.87
LBR-201ENST00000272163 CATIPQ7Z7H3 387 aa9.64□□□□□ -0.87
LBR-201ENST00000272163 SLFNL1Q499Z3 407 aa9.64□□□□□ -0.87
LBR-201ENST00000272163 CTR9Q6PD62 1173 aa9.64□□□□□ -0.87
LBR-201ENST00000272163 RNF180Q86T96 592 aa9.64□□□□□ -0.87
LBR-201ENST00000272163 CLEC10AQ8IUN9 316 aa9.64□□□□□ -0.87
LBR-201ENST00000272163 RIOK1Q9BRS2 568 aaKnown RBP9.64□□□□□ -0.87
LBR-201ENST00000272163 SPATC1LQ9H0A9 340 aa9.64□□□□□ -0.87
LBR-201ENST00000272163 BRCA1P38398 1863 aaKnown RBP9.63□□□□□ -0.87
LBR-201ENST00000272163 PAPPA2Q9BXP8 1791 aa9.63□□□□□ -0.87
LBR-201ENST00000272163 MAP2K5Q13163 448 aa9.63□□□□□ -0.87
LBR-201ENST00000272163 ANO1Q5XXA6 986 aa9.63□□□□□ -0.87
LBR-201ENST00000272163 APBA2Q99767 749 aa9.63□□□□□ -0.87
LBR-201ENST00000272163 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.63□□□□□ -0.872e-8■■■□□ 18.8
LBR-201ENST00000272163 RAVER2Q9HCJ3 691 aaKnown RBP9.63□□□□□ -0.87
LBR-201ENST00000272163 FEM1BQ9UK73 627 aa9.63□□□□□ -0.87
LBR-201ENST00000272163 DUOX1Q9NRD9 1551 aa9.63□□□□□ -0.87
LBR-201ENST00000272163 DLEC1Q9Y238 1755 aa9.63□□□□□ -0.87
LBR-201ENST00000272163 POLR2AP24928 1970 aaKnown RBP9.63□□□□□ -0.87
LBR-201ENST00000272163 SLC15A5A6NIM6 579 aa9.63□□□□□ -0.87
LBR-201ENST00000272163 KDM4AO75164 1064 aa9.63□□□□□ -0.87
LBR-201ENST00000272163 GJB1P08034 283 aa9.63□□□□□ -0.87
LBR-201ENST00000272163 TOP1P11387 765 aaKnown RBP9.63□□□□□ -0.87
LBR-201ENST00000272163 EN2P19622 333 aaPredicted RBP9.63□□□□□ -0.87
LBR-201ENST00000272163 GPR142Q7Z601 462 aa9.63□□□□□ -0.87
LBR-201ENST00000272163 RBM27Q9P2N5 1060 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms