RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 DGKHQ86XP1 1220 aa19.4■□□□□ 0.7
SNRPF-201ENST00000266735 ZKSCAN3Q9BRR0 538 aa19.4■□□□□ 0.7
SNRPF-201ENST00000266735 GOPCQ9HD26 462 aa19.4■□□□□ 0.7
SNRPF-201ENST00000266735 SLC45A1Q9Y2W3 748 aa19.4■□□□□ 0.7
SNRPF-201ENST00000266735 SNX14Q9Y5W7 946 aa19.4■□□□□ 0.7
SNRPF-201ENST00000266735 PABPC4Q13310 644 aaKnown RBP eCLIP19.39■□□□□ 0.691e-11■□□□□ 8.4
SNRPF-201ENST00000266735 DGKZQ13574 1117 aa19.39■□□□□ 0.69
SNRPF-201ENST00000266735 SART3Q15020 963 aaKnown RBP19.39■□□□□ 0.69
SNRPF-201ENST00000266735 GPAT2Q6NUI2 795 aa19.39■□□□□ 0.69
SNRPF-201ENST00000266735 CYB5R4Q7L1T6 521 aa19.39■□□□□ 0.69
SNRPF-201ENST00000266735 FAM43AQ8N2R8 423 aa19.39■□□□□ 0.69
SNRPF-201ENST00000266735 BEGAINQ9BUH8 593 aa19.39■□□□□ 0.69
SNRPF-201ENST00000266735 ATAD5Q96QE3 1844 aa19.38■□□□□ 0.69
SNRPF-201ENST00000266735 TNKSO95271 1327 aa19.38■□□□□ 0.69
SNRPF-201ENST00000266735 HMGB1P09429 215 aaKnown RBP19.38■□□□□ 0.69
SNRPF-201ENST00000266735 TOP1P11387 765 aaKnown RBP19.38■□□□□ 0.69
SNRPF-201ENST00000266735 VCAM1P19320 739 aa19.38■□□□□ 0.69
SNRPF-201ENST00000266735 MCM5P33992 734 aa19.38■□□□□ 0.69
SNRPF-201ENST00000266735 LRRC47Q8N1G4 583 aaKnown RBP19.38■□□□□ 0.69
SNRPF-201ENST00000266735 GMCL1P1Q8NEA9 526 aa19.38■□□□□ 0.69
SNRPF-201ENST00000266735 MTA3Q9BTC8 594 aa19.38■□□□□ 0.69
SNRPF-201ENST00000266735 CEP350Q5VT06 3117 aa19.38■□□□□ 0.69
SNRPF-201ENST00000266735 GREB1LQ9C091 1923 aaPredicted RBP19.37■□□□□ 0.69
SNRPF-201ENST00000266735 ERICH2A1L162 156 aa19.37■□□□□ 0.69
SNRPF-201ENST00000266735 F5H6K3 240 aa19.37■□□□□ 0.69
SNRPF-201ENST00000266735 PDHXO00330 501 aa19.37■□□□□ 0.69
SNRPF-201ENST00000266735 CA12O43570 354 aa19.37■□□□□ 0.69
SNRPF-201ENST00000266735 PSMA5P28066 241 aa19.37■□□□□ 0.69
SNRPF-201ENST00000266735 KLRC3Q07444 240 aa19.37■□□□□ 0.69
SNRPF-201ENST00000266735 ADCK5Q3MIX3 580 aa19.37■□□□□ 0.69
SNRPF-201ENST00000266735 TREML2Q5T2D2 321 aa19.37■□□□□ 0.69
SNRPF-201ENST00000266735 RCSD1Q6JBY9 416 aa19.37■□□□□ 0.69
SNRPF-201ENST00000266735 ANKS1AQ92625 1134 aa19.37■□□□□ 0.69
SNRPF-201ENST00000266735 WBP1LQ9NX94 342 aa19.37■□□□□ 0.69
SNRPF-201ENST00000266735 RNF186Q9NXI6 227 aa19.37■□□□□ 0.69
SNRPF-201ENST00000266735 SAGE1Q9NXZ1 904 aa19.37■□□□□ 0.69
SNRPF-201ENST00000266735 HOXA7P31268 230 aaPredicted RBP19.36■□□□□ 0.69
SNRPF-201ENST00000266735 ANAPC15P60006 121 aa19.36■□□□□ 0.69
SNRPF-201ENST00000266735 ENAHQ8N8S7 591 aaPredicted RBP19.36■□□□□ 0.69
SNRPF-201ENST00000266735 JAKMIP1Q96N16 626 aaKnown RBP19.36■□□□□ 0.69
SNRPF-201ENST00000266735 TMEM47Q9BQJ4 181 aa19.36■□□□□ 0.69
SNRPF-201ENST00000266735 PNMA3Q9UL41 463 aa19.36■□□□□ 0.69
SNRPF-201ENST00000266735 WDR19Q8NEZ3 1342 aa19.35■□□□□ 0.69
SNRPF-201ENST00000266735 IFIT3O14879 490 aaKnown RBP19.35■□□□□ 0.69
SNRPF-201ENST00000266735 WDR46O15213 610 aaKnown RBP19.35■□□□□ 0.69
SNRPF-201ENST00000266735 PRC1O43663 620 aa19.35■□□□□ 0.69
SNRPF-201ENST00000266735 RAD21O60216 631 aa19.35■□□□□ 0.69
SNRPF-201ENST00000266735 NDUFB10O96000 172 aa19.35■□□□□ 0.69
SNRPF-201ENST00000266735 OSBPP22059 807 aa19.35■□□□□ 0.69
SNRPF-201ENST00000266735 ANTXR2P58335 489 aa19.35■□□□□ 0.69
SNRPF-201ENST00000266735 IFIT1BQ5T764 474 aaKnown RBP19.35■□□□□ 0.69
SNRPF-201ENST00000266735 DHX32Q7L7V1 743 aaKnown RBP19.35■□□□□ 0.69
SNRPF-201ENST00000266735 CHST3Q7LGC8 479 aa19.35■□□□□ 0.69
SNRPF-201ENST00000266735 SPICE1Q8N0Z3 855 aa19.35■□□□□ 0.69
SNRPF-201ENST00000266735 TMEM87BQ96K49 555 aa19.35■□□□□ 0.69
SNRPF-201ENST00000266735 PARK7Q99497 189 aaKnown RBP19.35■□□□□ 0.69
SNRPF-201ENST00000266735 KAT14Q9H8E8 782 aa19.35■□□□□ 0.69
SNRPF-201ENST00000266735 PHIPQ8WWQ0 1821 aa19.35■□□□□ 0.69
SNRPF-201ENST00000266735 USP17L15C9J2P7 530 aa19.34■□□□□ 0.69
SNRPF-201ENST00000266735 USP17L13C9JLJ4 530 aa19.34■□□□□ 0.69
SNRPF-201ENST00000266735 USP17L11C9JVI0 530 aa19.34■□□□□ 0.69
SNRPF-201ENST00000266735 USP17L18D6R9N7 530 aa19.34■□□□□ 0.69
SNRPF-201ENST00000266735 USP17L22D6RA61 530 aa19.34■□□□□ 0.69
SNRPF-201ENST00000266735 USP17L17D6RBQ6 530 aa19.34■□□□□ 0.69
SNRPF-201ENST00000266735 USP17L19D6RCP7 530 aa19.34■□□□□ 0.69
SNRPF-201ENST00000266735 USP17L20D6RJB6 530 aa19.34■□□□□ 0.69
SNRPF-201ENST00000266735 USP17L24Q0WX57 530 aa19.34■□□□□ 0.69
SNRPF-201ENST00000266735 SEC23AQ15436 765 aa19.34■□□□□ 0.69
SNRPF-201ENST00000266735 TAF1CQ15572 869 aaPredicted RBP19.34■□□□□ 0.69
SNRPF-201ENST00000266735 KIAA1755Q5JYT7 1200 aa19.34■□□□□ 0.69
SNRPF-201ENST00000266735 SLFN13Q68D06 897 aa19.34■□□□□ 0.69
SNRPF-201ENST00000266735 CFHR5Q9BXR6 569 aa19.34■□□□□ 0.69
SNRPF-201ENST00000266735 RPAP3Q9H6T3 665 aaPredicted RBP19.34■□□□□ 0.69
SNRPF-201ENST00000266735 UPF2Q9HAU5 1272 aaKnown RBP19.34■□□□□ 0.69
SNRPF-201ENST00000266735 MYH8P13535 1937 aa19.33■□□□□ 0.69
SNRPF-201ENST00000266735 TRPA1O75762 1119 aa19.33■□□□□ 0.69
SNRPF-201ENST00000266735 IRX3P78415 501 aaPredicted RBP19.33■□□□□ 0.69
SNRPF-201ENST00000266735 WTAPQ15007 396 aa19.33■□□□□ 0.69
SNRPF-201ENST00000266735 TMEM67Q5HYA8 995 aa19.33■□□□□ 0.69
SNRPF-201ENST00000266735 BLOC1S2Q6QNY1 142 aa19.33■□□□□ 0.69
SNRPF-201ENST00000266735 IGDCC4Q8TDY8 1250 aa19.33■□□□□ 0.69
SNRPF-201ENST00000266735 GMCL1Q96IK5 515 aa19.33■□□□□ 0.69
SNRPF-201ENST00000266735 ZFYVE28Q9HCC9 887 aa19.33■□□□□ 0.69
SNRPF-201ENST00000266735 EXOSC10Q01780 885 aaKnown RBP19.32■□□□□ 0.68
SNRPF-201ENST00000266735 CATSPERGQ6ZRH7 1159 aa19.32■□□□□ 0.68
SNRPF-201ENST00000266735 PNMA1Q8ND90 353 aa19.32■□□□□ 0.68
SNRPF-201ENST00000266735 TM6SF1Q9BZW5 370 aa19.32■□□□□ 0.68
SNRPF-201ENST00000266735 ASCC2Q9H1I8 757 aaPredicted RBP19.32■□□□□ 0.68
SNRPF-201ENST00000266735 SH2B2O14492 632 aaPredicted RBP19.32■□□□□ 0.68
SNRPF-201ENST00000266735 CYP2C8P10632 490 aa19.32■□□□□ 0.68
SNRPF-201ENST00000266735 CASTP20810 708 aaKnown RBP19.32■□□□□ 0.68
SNRPF-201ENST00000266735 SLC1A4P43007 532 aa19.32■□□□□ 0.68
SNRPF-201ENST00000266735 CRHR2Q13324 411 aa19.32■□□□□ 0.68
SNRPF-201ENST00000266735 COL9A3Q14050 684 aaPredicted RBP19.32■□□□□ 0.68
SNRPF-201ENST00000266735 TMTC2Q8N394 836 aa19.32■□□□□ 0.68
SNRPF-201ENST00000266735 SMCR8Q8TEV9 937 aaPredicted RBP19.32■□□□□ 0.68
SNRPF-201ENST00000266735 DCAF4Q8WV16 495 aa19.32■□□□□ 0.68
SNRPF-201ENST00000266735 IL17RAQ96F46 866 aa19.32■□□□□ 0.68
SNRPF-201ENST00000266735 BACH2Q9BYV9 841 aa19.32■□□□□ 0.68
SNRPF-201ENST00000266735 TANGO6Q9C0B7 1094 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms