RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 IL13P35225 146 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 GNGT1P63211 74 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 CCDC89Q8N998 374 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 RDH13Q8NBN7 331 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 MYO5CQ9NQX4 1742 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 GIPC1O14908 333 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 ZNF853P0CG23 659 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 ARHGAP24Q8N264 748 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 DNM3Q9UQ16 869 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 EYA3Q99504 573 aa19.91■□□□□ 0.78
COL5A3-201ENST00000264828 FLOT1O75955 427 aa19.9■□□□□ 0.78
COL5A3-201ENST00000264828 TMEM63CQ9P1W3 806 aa19.9■□□□□ 0.78
COL5A3-201ENST00000264828 CCDC38Q502W7 563 aa19.9■□□□□ 0.78
COL5A3-201ENST00000264828 TRIM68Q6AZZ1 485 aa19.9■□□□□ 0.78
COL5A3-201ENST00000264828 KDM2BQ8NHM5 1336 aa19.9■□□□□ 0.78
COL5A3-201ENST00000264828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.9■□□□□ 0.78
COL5A3-201ENST00000264828 CTNNA1P35221 906 aaKnown RBP19.9■□□□□ 0.78
COL5A3-201ENST00000264828 U2AF1L4Q8WU68 220 aaKnown RBP19.9■□□□□ 0.78
COL5A3-201ENST00000264828 VCXQ9H320 206 aa19.9■□□□□ 0.78
COL5A3-201ENST00000264828 CAPN7Q9Y6W3 813 aa19.9■□□□□ 0.78
COL5A3-201ENST00000264828 SH2D4BQ5SQS7 431 aa19.9■□□□□ 0.78
COL5A3-201ENST00000264828 PLBD2Q8NHP8 589 aa19.9■□□□□ 0.78
COL5A3-201ENST00000264828 JDP2Q8WYK2 163 aa19.9■□□□□ 0.78
COL5A3-201ENST00000264828 ZMYM4Q5VZL5 1548 aa19.9■□□□□ 0.78
COL5A3-201ENST00000264828 A6NNZ2 444 aa19.89■□□□□ 0.78
COL5A3-201ENST00000264828 ATP1A2P50993 1020 aa19.89■□□□□ 0.78
COL5A3-201ENST00000264828 TUBB8Q3ZCM7 444 aa19.89■□□□□ 0.78
COL5A3-201ENST00000264828 TSKSQ9UJT2 592 aa19.89■□□□□ 0.78
COL5A3-201ENST00000264828 PNMA6EA0A0J9YXQ4 647 aa19.89■□□□□ 0.77
COL5A3-201ENST00000264828 CD19P15391 556 aa19.89■□□□□ 0.77
COL5A3-201ENST00000264828 METTL22Q9BUU2 404 aaPredicted RBP19.89■□□□□ 0.77
COL5A3-201ENST00000264828 SH2D4AQ9H788 454 aa19.89■□□□□ 0.77
COL5A3-201ENST00000264828 BUB1O43683 1085 aa19.89■□□□□ 0.77
COL5A3-201ENST00000264828 BCRP11274 1271 aa19.89■□□□□ 0.77
COL5A3-201ENST00000264828 STX2P32856 288 aa19.89■□□□□ 0.77
COL5A3-201ENST00000264828 PHLDB2Q86SQ0 1253 aa19.89■□□□□ 0.77
COL5A3-201ENST00000264828 SUCLG2Q96I99 432 aa19.89■□□□□ 0.77
COL5A3-201ENST00000264828 ARHGEF10LQ9HCE6 1279 aa19.89■□□□□ 0.77
COL5A3-201ENST00000264828 CCNL1Q9UK58 526 aaPredicted RBP19.89■□□□□ 0.77
COL5A3-201ENST00000264828 ABCB4P21439 1286 aa19.89■□□□□ 0.77
COL5A3-201ENST00000264828 SAR1BQ9Y6B6 198 aa19.89■□□□□ 0.77
COL5A3-201ENST00000264828 RGS16O15492 202 aaPredicted RBP19.88■□□□□ 0.77
COL5A3-201ENST00000264828 ZNF790Q6PG37 636 aa19.88■□□□□ 0.77
COL5A3-201ENST00000264828 CMTR1Q8N1G2 835 aaKnown RBP19.88■□□□□ 0.77
COL5A3-201ENST00000264828 DDX27Q96GQ7 796 aaKnown RBP19.88■□□□□ 0.77
COL5A3-201ENST00000264828 ORAI2Q96SN7 254 aa19.88■□□□□ 0.77
COL5A3-201ENST00000264828 GJA3Q9Y6H8 435 aa19.88■□□□□ 0.77
COL5A3-201ENST00000264828 ZSCAN26Q16670 478 aa19.88■□□□□ 0.77
COL5A3-201ENST00000264828 ANKRD20A3Q5VUR7 823 aa19.88■□□□□ 0.77
COL5A3-201ENST00000264828 KRT25Q7Z3Z0 450 aa19.88■□□□□ 0.77
COL5A3-201ENST00000264828 DDX17Q92841 729 aaKnown RBP19.88■□□□□ 0.77
COL5A3-201ENST00000264828 HINFPQ9BQA5 517 aa19.88■□□□□ 0.77
COL5A3-201ENST00000264828 FAM47AQ5JRC9 791 aa19.88■□□□□ 0.77
COL5A3-201ENST00000264828 CAPN12Q6ZSI9 719 aa19.88■□□□□ 0.77
COL5A3-201ENST00000264828 SAMD9Q5K651 1589 aa19.88■□□□□ 0.77
COL5A3-201ENST00000264828 GCC2Q8IWJ2 1684 aa19.88■□□□□ 0.77
COL5A3-201ENST00000264828 BIN2Q9UBW5 565 aaPredicted RBP19.88■□□□□ 0.77
COL5A3-201ENST00000264828 MUM1Q2TAK8 710 aa19.87■□□□□ 0.77
COL5A3-201ENST00000264828 CROCCP2Q86T23 111 aa19.87■□□□□ 0.77
COL5A3-201ENST00000264828 NOP56O00567 594 aaKnown RBP19.87■□□□□ 0.77
COL5A3-201ENST00000264828 LGSNQ5TDP6 509 aa19.87■□□□□ 0.77
COL5A3-201ENST00000264828 NBPF14Q5TI25 921 aa19.87■□□□□ 0.77
COL5A3-201ENST00000264828 KCNK3O14649 394 aa19.87■□□□□ 0.77
COL5A3-201ENST00000264828 CNBD1Q8NA66 436 aa19.87■□□□□ 0.77
COL5A3-201ENST00000264828 ZNF532Q9HCE3 1301 aa19.87■□□□□ 0.77
COL5A3-201ENST00000264828 CTAGE3PQ8IX95 158 aa19.87■□□□□ 0.77
COL5A3-201ENST00000264828 GSDMBQ8TAX9 411 aa19.87■□□□□ 0.77
COL5A3-201ENST00000264828 CDCA7Q9BWT1 371 aaPredicted RBP19.87■□□□□ 0.77
COL5A3-201ENST00000264828 KCNJ18B7U540 433 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 KCNJ12Q14500 433 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 ME3Q16798 604 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 TTC19Q6DKK2 380 aaPredicted RBP19.86■□□□□ 0.77
COL5A3-201ENST00000264828 CCDC13Q8IYE1 715 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 SLC52A2Q9HAB3 445 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 AMFRQ9UKV5 643 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 NR1I2O75469 434 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 ZAP70P43403 619 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 ADAT2Q7Z6V5 191 aaKnown RBP19.86■□□□□ 0.77
COL5A3-201ENST00000264828 RAB17Q9H0T7 212 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 PICK1Q9NRD5 415 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 E7EWF7 191 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 TMOD4Q9NZQ9 345 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 PCDHB13Q9Y5F0 798 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 AOX1Q06278 1338 aa19.86■□□□□ 0.77
COL5A3-201ENST00000264828 ARHGAP42A6NI28 874 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 UHMK1Q8TAS1 419 aaKnown RBP19.85■□□□□ 0.77
COL5A3-201ENST00000264828 USP19O94966 1318 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 PFKFB1P16118 471 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 DPH5Q9H2P9 285 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 RIPOR2Q9Y4F9 1068 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 MAP7Q14244 749 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 CPXCR1Q8N123 301 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 RNF40O75150 1001 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 PALM2Q8IXS6 379 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 KRT12Q99456 494 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 PPFIA4O75335 1185 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 CYP2J2P51589 502 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 TCP10Q12799 353 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 MORC3Q14149 939 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 MAPKAPK5Q8IW41 473 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms