RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ANKRD20A12PQ8NF67 263 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 SHISA4Q96DD7 197 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 RNF41Q9H4P4 317 aaPredicted RBP14.02□□□□□ -0.17
CHMP3-201ENST00000263856 ANKZF1Q9H8Y5 726 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 AKAP11Q9UKA4 1901 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 LAMB4A4D0S4 1761 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 CCDC151A5D8V7 595 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 RNF225M0QZC1 329 aaPredicted RBP14.02□□□□□ -0.17
CHMP3-201ENST00000263856 CNGA4Q8IV77 575 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 PANX2Q96RD6 677 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 CHP1Q99653 195 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 NAPGQ99747 312 aaPredicted RBP14.02□□□□□ -0.17
CHMP3-201ENST00000263856 PLA2G12BQ9BX93 195 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 HDAC6Q9UBN7 1215 aa14.02□□□□□ -0.17
CHMP3-201ENST00000263856 TRIM66O15016 1216 aa14.01□□□□□ -0.17
CHMP3-201ENST00000263856 SRGAP2O75044 1071 aa14.01□□□□□ -0.17
CHMP3-201ENST00000263856 IGHMBP2P38935 993 aaKnown RBP14.01□□□□□ -0.17
CHMP3-201ENST00000263856 TRIM28Q13263 835 aaKnown RBP14.01□□□□□ -0.17
CHMP3-201ENST00000263856 NOA1Q8NC60 698 aaKnown RBP14.01□□□□□ -0.17
CHMP3-201ENST00000263856 RASGRP4Q8TDF6 673 aa14.01□□□□□ -0.17
CHMP3-201ENST00000263856 MAGEB6P1A0A0J9YX57 407 aa14.01□□□□□ -0.17
CHMP3-201ENST00000263856 GTF2E1P29083 439 aaPredicted RBP14.01□□□□□ -0.17
CHMP3-201ENST00000263856 ERVK-24P63145 666 aa14.01□□□□□ -0.17
CHMP3-201ENST00000263856 HDXQ7Z353 690 aa14.01□□□□□ -0.17
CHMP3-201ENST00000263856 ENAHQ8N8S7 591 aaPredicted RBP14.01□□□□□ -0.17
CHMP3-201ENST00000263856 STAG1Q8WVM7 1258 aa14.01□□□□□ -0.17
CHMP3-201ENST00000263856 NELFBQ8WX92 580 aa14.01□□□□□ -0.17
CHMP3-201ENST00000263856 CTAGE1Q96RT6 745 aa14.01□□□□□ -0.17
CHMP3-201ENST00000263856 NUP188Q5SRE5 1749 aa14.01□□□□□ -0.17
CHMP3-201ENST00000263856 KCPQ6ZWJ8 1503 aa14□□□□□ -0.17
CHMP3-201ENST00000263856 ERCC3P19447 782 aa14□□□□□ -0.17
CHMP3-201ENST00000263856 CAGE1Q8TC20 777 aa14□□□□□ -0.17
CHMP3-201ENST00000263856 MST1RQ04912 1400 aa14□□□□□ -0.17
CHMP3-201ENST00000263856 ECM29Q5VYK3 1845 aa14□□□□□ -0.17
CHMP3-201ENST00000263856 HSPA2P54652 639 aa14□□□□□ -0.17
CHMP3-201ENST00000263856 NT5DC1Q5TFE4 455 aa14□□□□□ -0.17
CHMP3-201ENST00000263856 IQCA1Q86XH1 822 aa14□□□□□ -0.17
CHMP3-201ENST00000263856 KCNJ18B7U540 433 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 PPP1R3GB7ZBB8 358 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 EIF3JO75822 258 aaKnown RBP13.99□□□□□ -0.17
CHMP3-201ENST00000263856 VEGFAP15692 232 aaPredicted RBP13.99□□□□□ -0.17
CHMP3-201ENST00000263856 KCNJ12Q14500 433 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 BRD3Q15059 726 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 TSR1Q2NL82 804 aaKnown RBP13.99□□□□□ -0.17
CHMP3-201ENST00000263856 FKBP15Q5T1M5 1219 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 SUSD4Q5VX71 490 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 GSPT2Q8IYD1 628 aaKnown RBP13.99□□□□□ -0.17
CHMP3-201ENST00000263856 TMTC2Q8N394 836 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 ABHD10Q9NUJ1 306 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 AATFQ9NY61 560 aaKnown RBP eCLIP13.99□□□□□ -0.17
CHMP3-201ENST00000263856 LCMT1Q9UIC8 334 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 MROH5Q6ZUA9 1318 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 COPB1P53618 953 aaKnown RBP13.99□□□□□ -0.17
CHMP3-201ENST00000263856 PAK1Q13153 545 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 DRC1Q96MC2 740 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 RABEP2Q9H5N1 569 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 ATP8B1O43520 1251 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 MRPS25P82663 173 aaKnown RBP13.99□□□□□ -0.17
CHMP3-201ENST00000263856 ALX1Q15699 326 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 BICDL1Q6ZP65 573 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 APTXQ7Z2E3 356 aaKnown RBP13.99□□□□□ -0.17
CHMP3-201ENST00000263856 KIAA1328Q86T90 577 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 ZNF579Q8NAF0 562 aaKnown RBP13.99□□□□□ -0.17
CHMP3-201ENST00000263856 CTCFLQ8NI51 663 aaPredicted RBP13.99□□□□□ -0.17
CHMP3-201ENST00000263856 GPKOWQ92917 476 aaPredicted RBP eCLIP13.99□□□□□ -0.17
CHMP3-201ENST00000263856 ZSCAN10Q96SZ4 725 aaPredicted RBP13.99□□□□□ -0.17
CHMP3-201ENST00000263856 GLI3P10071 1580 aa13.99□□□□□ -0.17
CHMP3-201ENST00000263856 CDHR2Q9BYE9 1310 aa13.98□□□□□ -0.17
CHMP3-201ENST00000263856 PP2D1A8MPX8 630 aa13.98□□□□□ -0.17
CHMP3-201ENST00000263856 IQUBQ8NA54 791 aa13.98□□□□□ -0.17
CHMP3-201ENST00000263856 SLC4A9Q96Q91 983 aa13.98□□□□□ -0.17
CHMP3-201ENST00000263856 RNF26Q9BY78 433 aaPredicted RBP13.98□□□□□ -0.17
CHMP3-201ENST00000263856 TTF2Q9UNY4 1162 aaKnown RBP13.98□□□□□ -0.17
CHMP3-201ENST00000263856 XDHP47989 1333 aa13.98□□□□□ -0.17
CHMP3-201ENST00000263856 ADAMTS3O15072 1205 aa13.98□□□□□ -0.17
CHMP3-201ENST00000263856 GNAT2P19087 354 aa13.98□□□□□ -0.17
CHMP3-201ENST00000263856 STAT6P42226 847 aa13.98□□□□□ -0.17
CHMP3-201ENST00000263856 EIF5P55010 431 aaKnown RBP13.98□□□□□ -0.17
CHMP3-201ENST00000263856 PKN1Q16512 942 aa13.98□□□□□ -0.17
CHMP3-201ENST00000263856 BEND6Q5SZJ8 279 aaPredicted RBP13.98□□□□□ -0.17
CHMP3-201ENST00000263856 ACSBG1Q96GR2 724 aa13.98□□□□□ -0.17
CHMP3-201ENST00000263856 NAA15Q9BXJ9 866 aaKnown RBP13.98□□□□□ -0.17
CHMP3-201ENST00000263856 CWC15Q9P013 229 aaKnown RBP13.98□□□□□ -0.17
CHMP3-201ENST00000263856 ALS2Q96Q42 1657 aa13.98□□□□□ -0.17
CHMP3-201ENST00000263856 RTL9Q8NET4 1388 aa13.98□□□□□ -0.17
CHMP3-201ENST00000263856 CASP8Q14790 479 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 CYP26C1Q6V0L0 522 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 RASGRP2Q7LDG7 609 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 GOLGA6L1Q8N7Z2 621 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 TRIM47Q96LD4 638 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 GSDMAQ96QA5 445 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 MYO6Q9UM54 1294 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 MYH6P13533 1939 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 USP17L12C9JPN9 530 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 USP17L21D6R901 530 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 CHRNDQ07001 517 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 CCDC122Q5T0U0 273 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 FOXR1Q6PIV2 292 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 TMTC1Q8IUR5 882 aa13.97□□□□□ -0.17
CHMP3-201ENST00000263856 PSMB7Q99436 277 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms