RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ZSWIM5Q9P217 1185 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 PAK1Q13153 545 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 CCDC122Q5T0U0 273 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 LMOD2Q6P5Q4 547 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 AIDAQ96BJ3 306 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 CAPS2Q9BXY5 557 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 VPS16Q9H269 839 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 FAM184BQ9ULE4 1060 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 LUC7L2Q9Y383 392 aaKnown RBP13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 A0A1W2PQC6 194 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 KCNJ18B7U540 433 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 PATL2C9JE40 543 aaKnown RBP13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 H7C1D1 291 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 TFRCP02786 760 aaKnown RBP13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 CYLC1P35663 651 aaPredicted RBP13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 SETQ01105 290 aaPredicted RBP13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 IFIT5Q13325 482 aaKnown RBP13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 KCNJ12Q14500 433 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 RRAGBQ5VZM2 374 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 USP49Q70CQ1 688 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 MMS19Q96T76 1030 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 SELENOOQ9BVL4 669 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 DENND2AQ9ULE3 1009 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 FAM169AQ9Y6X4 670 aa13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 ZC3H4Q9UPT8 1303 aaKnown RBP13.93□□□□□ -0.18
CHMP2B-201ENST00000263780 EXOC5O00471 708 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 ABL1P00519 1130 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 GUCY1A2P33402 732 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 UBXN1Q04323 297 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 NR5A1Q13285 461 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 WTAPQ15007 396 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 MFSD6Q6ZSS7 791 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 TTLL7Q6ZT98 887 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 B4GALNT4Q76KP1 1039 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 KIAA1328Q86T90 577 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 SYMPKQ92797 1274 aaKnown RBP13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 NAPBQ9H115 298 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 ZNHIT6Q9NWK9 470 aaKnown RBP13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 KIF1AQ12756 1690 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 CCT5P48643 541 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 AKNAD1Q5T1N1 836 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 NBPF10Q6P3W6 841 aaKnown RBP13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 RPAINQ86UA6 219 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 JAKMIP2Q96AA8 810 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 STRBPQ96SI9 672 aaKnown RBP13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 DNAJC7Q99615 494 aa13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 ATXN2Q99700 1313 aaKnown RBP13.92□□□□□ -0.18
CHMP2B-201ENST00000263780 IDH1O75874 414 aaKnown RBP13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 UQCRFS1P1P0C7P4 283 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 MCAMP43121 646 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 EPSTI1Q96J88 318 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 RNF26Q9BY78 433 aaPredicted RBP13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 KAT14Q9H8E8 782 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 TAB2Q9NYJ8 693 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 ZNF532Q9HCE3 1301 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 ANKRD65E5RJM6 399 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 EIF3HO15372 352 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 GTPBP6O43824 516 aaPredicted RBP13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 ATP1A1P05023 1023 aaKnown RBP13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 INPP5BP32019 993 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 KRT2P35908 639 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 ITIH3Q06033 890 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 METTL24Q5JXM2 366 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 CCDC170Q8IYT3 715 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 FNBP4Q8N3X1 1017 aaPredicted RBP13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 PLA2G12BQ9BX93 195 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 TSGA10Q9BZW7 698 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 PLEKHA4Q9H4M7 779 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 TOMM22Q9NS69 142 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 CAPN11Q9UMQ6 739 aa13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 REXO2Q9Y3B8 237 aaKnown RBP13.91□□□□□ -0.18
CHMP2B-201ENST00000263780 A0A087X0B3 334 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 PDE6AP16499 860 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 ZNF658Q5TYW1 1059 aaPredicted RBP13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 ALS2CLQ60I27 953 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 BCAS4Q8TDM0 211 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 NELFBQ8WX92 580 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 CHP1Q99653 195 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 NUP58Q9BVL2 599 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 NACAP1Q9BZK3 213 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 BCL9LQ86UU0 1499 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 UBE2Q2LH0YL09 131 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 AGPSO00116 658 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 ENC1O14682 589 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 PI16Q6UXB8 463 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 SMYD4Q8IYR2 804 aaPredicted RBP13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 IFNL3Q8IZI9 196 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 MMGT1Q8N4V1 131 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 FANCBQ8NB91 859 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 ZBTB9Q96C00 473 aa13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 RNF41Q9H4P4 317 aaPredicted RBP13.9□□□□□ -0.18
CHMP2B-201ENST00000263780 EPB41P11171 864 aaKnown RBP13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 GNAT2P19087 354 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 EEF1GP26641 437 aaKnown RBP13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 TRIM28Q13263 835 aaKnown RBP13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 SEMA3FQ13275 785 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 MICALCLQ6ZW33 695 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 MB21D1Q8N884 522 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms