RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 FASTKD5Q7L8L6 764 aaKnown RBP21.6■■□□□ 1.05
SDF4-201ENST00000263741 NUP88Q99567 741 aaPredicted RBP21.6■■□□□ 1.05
SDF4-201ENST00000263741 AGTPBP1Q9UPW5 1226 aa21.6■■□□□ 1.05
SDF4-201ENST00000263741 CPA1P15085 419 aa21.59■■□□□ 1.05
SDF4-201ENST00000263741 INHBEP58166 350 aa21.59■■□□□ 1.05
SDF4-201ENST00000263741 MAP2K1Q02750 393 aaPredicted RBP21.59■■□□□ 1.05
SDF4-201ENST00000263741 PROCA1Q8NCQ7 364 aaPredicted RBP21.59■■□□□ 1.05
SDF4-201ENST00000263741 TCEANC2Q96MN5 208 aa21.59■■□□□ 1.05
SDF4-201ENST00000263741 R3HDMLQ9H3Y0 253 aa21.59■■□□□ 1.05
SDF4-201ENST00000263741 VCPKMTQ9H867 229 aa21.59■■□□□ 1.05
SDF4-201ENST00000263741 WBP1LQ9NX94 342 aa21.59■■□□□ 1.05
SDF4-201ENST00000263741 ZSWIM8A7E2V4 1837 aa21.59■■□□□ 1.05
SDF4-201ENST00000263741 CYP2C8P10632 490 aa21.59■■□□□ 1.05
SDF4-201ENST00000263741 ZKSCAN1P17029 563 aaPredicted RBP21.59■■□□□ 1.05
SDF4-201ENST00000263741 IQCA1Q86XH1 822 aa21.59■■□□□ 1.05
SDF4-201ENST00000263741 ENAHQ8N8S7 591 aaPredicted RBP21.59■■□□□ 1.05
SDF4-201ENST00000263741 IPO9Q96P70 1041 aaKnown RBP21.59■■□□□ 1.05
SDF4-201ENST00000263741 ZSCAN10Q96SZ4 725 aaPredicted RBP21.59■■□□□ 1.05
SDF4-201ENST00000263741 UBAC1Q9BSL1 405 aa21.59■■□□□ 1.05
SDF4-201ENST00000263741 LRRC2Q9BYS8 371 aa21.59■■□□□ 1.05
SDF4-201ENST00000263741 SH2D4AQ9H788 454 aa21.59■■□□□ 1.05
SDF4-201ENST00000263741 GPHNQ9NQX3 736 aaPredicted RBP21.59■■□□□ 1.05
SDF4-201ENST00000263741 TBC1D8O95759 1140 aa21.58■■□□□ 1.05
SDF4-201ENST00000263741 USP14P54578 494 aa21.58■■□□□ 1.05
SDF4-201ENST00000263741 ANKRD23Q86SG2 305 aa21.58■■□□□ 1.05
SDF4-201ENST00000263741 SENP2Q9HC62 589 aa21.58■■□□□ 1.05
SDF4-201ENST00000263741 TCP11L1Q9NUJ3 509 aa21.58■■□□□ 1.05
SDF4-201ENST00000263741 NDUFB10O96000 172 aa21.57■■□□□ 1.04
SDF4-201ENST00000263741 HSPA1AP0DMV8 641 aaKnown RBP21.57■■□□□ 1.04
SDF4-201ENST00000263741 HSPA1BP0DMV9 641 aaKnown RBP21.57■■□□□ 1.04
SDF4-201ENST00000263741 CRHR2Q13324 411 aa21.57■■□□□ 1.04
SDF4-201ENST00000263741 TAF1CQ15572 869 aaPredicted RBP21.57■■□□□ 1.04
SDF4-201ENST00000263741 REM2Q8IYK8 340 aaPredicted RBP21.57■■□□□ 1.04
SDF4-201ENST00000263741 KCNB2Q92953 911 aa21.57■■□□□ 1.04
SDF4-201ENST00000263741 C12orf42Q96LP6 360 aa21.57■■□□□ 1.04
SDF4-201ENST00000263741 JAKMIP1Q96N16 626 aaKnown RBP21.57■■□□□ 1.04
SDF4-201ENST00000263741 TMEM47Q9BQJ4 181 aa21.57■■□□□ 1.04
SDF4-201ENST00000263741 RPAP3Q9H6T3 665 aaPredicted RBP21.57■■□□□ 1.04
SDF4-201ENST00000263741 CASP8AP2Q9UKL3 1982 aa21.57■■□□□ 1.04
SDF4-201ENST00000263741 BEGAINQ9BUH8 593 aa21.57■■□□□ 1.04
SDF4-201ENST00000263741 GOPCQ9HD26 462 aa21.57■■□□□ 1.04
SDF4-201ENST00000263741 F5H6K3 240 aa21.56■■□□□ 1.04
SDF4-201ENST00000263741 PRC1O43663 620 aa21.56■■□□□ 1.04
SDF4-201ENST00000263741 NOVP48745 357 aa21.56■■□□□ 1.04
SDF4-201ENST00000263741 KLRC3Q07444 240 aa21.56■■□□□ 1.04
SDF4-201ENST00000263741 NEK1Q96PY6 1258 aa21.56■■□□□ 1.04
SDF4-201ENST00000263741 FAM83BQ5T0W9 1011 aa21.56■■□□□ 1.04
SDF4-201ENST00000263741 OTUD7BQ6GQQ9 843 aa21.56■■□□□ 1.04
SDF4-201ENST00000263741 SAMD1Q6SPF0 538 aaPredicted RBP21.56■■□□□ 1.04
SDF4-201ENST00000263741 MKL1Q969V6 931 aa21.56■■□□□ 1.04
SDF4-201ENST00000263741 TANGO6Q9C0B7 1094 aa21.56■■□□□ 1.04
SDF4-201ENST00000263741 IFIT3O14879 490 aaKnown RBP21.55■■□□□ 1.04
SDF4-201ENST00000263741 MCCP23508 829 aa21.55■■□□□ 1.04
SDF4-201ENST00000263741 SEC23AQ15436 765 aa21.55■■□□□ 1.04
SDF4-201ENST00000263741 TSGA10IPQ3SY00 556 aa21.55■■□□□ 1.04
SDF4-201ENST00000263741 ASCC2Q9H1I8 757 aaPredicted RBP21.55■■□□□ 1.04
SDF4-201ENST00000263741 ISY1Q9ULR0 285 aaKnown RBP21.55■■□□□ 1.04
SDF4-201ENST00000263741 A0A0G2JMZ2 1700 aa21.55■■□□□ 1.04
SDF4-201ENST00000263741 FOXN1O15353 648 aa21.54■■□□□ 1.04
SDF4-201ENST00000263741 EPB41L2O43491 1005 aaKnown RBP21.54■■□□□ 1.04
SDF4-201ENST00000263741 PEX10O60683 326 aa21.54■■□□□ 1.04
SDF4-201ENST00000263741 TOP1P11387 765 aaKnown RBP21.54■■□□□ 1.04
SDF4-201ENST00000263741 MCM5P33992 734 aa21.54■■□□□ 1.04
SDF4-201ENST00000263741 TMEM67Q5HYA8 995 aa21.54■■□□□ 1.04
SDF4-201ENST00000263741 SLFN13Q68D06 897 aa21.54■■□□□ 1.04
SDF4-201ENST00000263741 LPAR1Q92633 364 aa21.54■■□□□ 1.04
SDF4-201ENST00000263741 FBXO28Q9NVF7 368 aa21.54■■□□□ 1.04
SDF4-201ENST00000263741 IRX3P78415 501 aaPredicted RBP21.53■■□□□ 1.04
SDF4-201ENST00000263741 KRT32Q14532 448 aa21.53■■□□□ 1.04
SDF4-201ENST00000263741 IFIT1BQ5T764 474 aaKnown RBP21.53■■□□□ 1.04
SDF4-201ENST00000263741 GMCL1P1Q8NEA9 526 aa21.53■■□□□ 1.04
SDF4-201ENST00000263741 CA12O43570 354 aa21.52■■□□□ 1.04
SDF4-201ENST00000263741 CASTP20810 708 aaKnown RBP21.52■■□□□ 1.04
SDF4-201ENST00000263741 DAXXQ9UER7 740 aaPredicted RBP21.52■■□□□ 1.04
SDF4-201ENST00000263741 WDR46O15213 610 aaKnown RBP21.52■■□□□ 1.04
SDF4-201ENST00000263741 MGAMO43451 1857 aa21.52■■□□□ 1.04
SDF4-201ENST00000263741 ECM2O94769 699 aaPredicted RBP21.52■■□□□ 1.04
SDF4-201ENST00000263741 ALDH1A1P00352 501 aa21.52■■□□□ 1.04
SDF4-201ENST00000263741 DGKHQ86XP1 1220 aa21.52■■□□□ 1.04
SDF4-201ENST00000263741 PNMA1Q8ND90 353 aa21.52■■□□□ 1.04
SDF4-201ENST00000263741 SMCR8Q8TEV9 937 aaPredicted RBP21.52■■□□□ 1.04
SDF4-201ENST00000263741 PARK7Q99497 189 aaKnown RBP21.52■■□□□ 1.04
SDF4-201ENST00000263741 KAT14Q9H8E8 782 aa21.52■■□□□ 1.04
SDF4-201ENST00000263741 CPA4Q9UI42 421 aa21.52■■□□□ 1.04
SDF4-201ENST00000263741 FRMPD2Q68DX3 1309 aaPredicted RBP21.52■■□□□ 1.03
SDF4-201ENST00000263741 MYH6P13533 1939 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 USP17L15C9J2P7 530 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 USP17L13C9JLJ4 530 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 USP17L11C9JVI0 530 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 USP17L18D6R9N7 530 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 USP17L22D6RA61 530 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 USP17L17D6RBQ6 530 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 USP17L19D6RCP7 530 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 USP17L20D6RJB6 530 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 HOXA7P31268 230 aaPredicted RBP21.51■■□□□ 1.03
SDF4-201ENST00000263741 NT5C2P49902 561 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 USP17L24Q0WX57 530 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 WTAPQ15007 396 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 PPP4R3BQ5MIZ7 849 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 KCTD1Q719H9 257 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms