RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 CYBAP13498 195 aa15.99■□□□□ 0.15
SGCA-201ENST00000262018 JAG1P78504 1218 aa15.99■□□□□ 0.15
SGCA-201ENST00000262018 NECAB3Q96P71 396 aaPredicted RBP15.99■□□□□ 0.15
SGCA-201ENST00000262018 PRDM12Q9H4Q4 367 aa15.99■□□□□ 0.15
SGCA-201ENST00000262018 RABGAP1Q9Y3P9 1069 aa15.99■□□□□ 0.15
SGCA-201ENST00000262018 TACC3Q9Y6A5 838 aa15.99■□□□□ 0.15
SGCA-201ENST00000262018 IVNS1ABPQ9Y6Y0 642 aa15.99■□□□□ 0.15
SGCA-201ENST00000262018 CDC45O75419 566 aa15.98■□□□□ 0.15
SGCA-201ENST00000262018 CNMDO75829 334 aa15.98■□□□□ 0.15
SGCA-201ENST00000262018 HOXC6P09630 235 aa15.98■□□□□ 0.15
SGCA-201ENST00000262018 RAG1P15918 1043 aa15.98■□□□□ 0.15
SGCA-201ENST00000262018 MECOMQ03112 1051 aa15.98■□□□□ 0.15
SGCA-201ENST00000262018 FPGSQ05932 587 aa15.98■□□□□ 0.15
SGCA-201ENST00000262018 RASGRF1Q13972 1273 aa15.98■□□□□ 0.15
SGCA-201ENST00000262018 CCDC102BQ68D86 513 aa15.98■□□□□ 0.15
SGCA-201ENST00000262018 BCL11AQ9H165 835 aa15.98■□□□□ 0.15
SGCA-201ENST00000262018 HCN4Q9Y3Q4 1203 aa15.98■□□□□ 0.15
SGCA-201ENST00000262018 CLTBP09497 229 aa15.97■□□□□ 0.15
SGCA-201ENST00000262018 SDSP20132 328 aa15.97■□□□□ 0.15
SGCA-201ENST00000262018 ADORA1P30542 326 aa15.97■□□□□ 0.15
SGCA-201ENST00000262018 SHROOM1Q2M3G4 852 aaPredicted RBP15.97■□□□□ 0.15
SGCA-201ENST00000262018 ERICH6Q7L0X2 663 aa15.97■□□□□ 0.15
SGCA-201ENST00000262018 CLASRPQ8N2M8 674 aaKnown RBP15.97■□□□□ 0.15
SGCA-201ENST00000262018 UPF2Q9HAU5 1272 aaKnown RBP15.97■□□□□ 0.15
SGCA-201ENST00000262018 EMILIN3Q9NT22 766 aa15.97■□□□□ 0.15
SGCA-201ENST00000262018 GDF11O95390 407 aa15.96■□□□□ 0.15
SGCA-201ENST00000262018 IGFBP4P22692 258 aa15.96■□□□□ 0.15
SGCA-201ENST00000262018 GRB14Q14449 540 aa15.96■□□□□ 0.15
SGCA-201ENST00000262018 C1orf53Q5VUE5 145 aa15.96■□□□□ 0.15
SGCA-201ENST00000262018 USP17L2Q6R6M4 530 aa15.96■□□□□ 0.15
SGCA-201ENST00000262018 CCDC129Q6ZRS4 1044 aa15.96■□□□□ 0.15
SGCA-201ENST00000262018 TBC1D9Q6ZT07 1266 aa15.96■□□□□ 0.15
SGCA-201ENST00000262018 ZNF384Q8TF68 577 aa15.96■□□□□ 0.15
SGCA-201ENST00000262018 PI4KBQ9UBF8 816 aa15.96■□□□□ 0.15
SGCA-201ENST00000262018 ARIH1Q9Y4X5 557 aaPredicted RBP15.96■□□□□ 0.15
SGCA-201ENST00000262018 EIF5BO60841 1220 aaKnown RBP15.95■□□□□ 0.14
SGCA-201ENST00000262018 MAP4K4O95819 1239 aaPredicted RBP15.95■□□□□ 0.14
SGCA-201ENST00000262018 LDHCP07864 332 aa15.95■□□□□ 0.14
SGCA-201ENST00000262018 TFCP2Q12800 502 aa15.95■□□□□ 0.14
SGCA-201ENST00000262018 LRRC41Q15345 812 aa15.95■□□□□ 0.14
SGCA-201ENST00000262018 DPP9Q86TI2 863 aa15.95■□□□□ 0.14
SGCA-201ENST00000262018 TEX11Q8IYF3 940 aa15.95■□□□□ 0.14
SGCA-201ENST00000262018 IPO9Q96P70 1041 aaKnown RBP15.95■□□□□ 0.14
SGCA-201ENST00000262018 AKAP2Q9Y2D5 859 aa15.95■□□□□ 0.14
SGCA-201ENST00000262018 MYO9BQ13459 2157 aa15.95■□□□□ 0.14
SGCA-201ENST00000262018 TTC41PQ6P2S7 1318 aa15.95■□□□□ 0.14
SGCA-201ENST00000262018 KIAA0355O15063 1070 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 SEPT4O43236 478 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 PBX2P40425 430 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 ADGRE1Q14246 886 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 TBC1D32Q96NH3 1257 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 LRFN3Q9BTN0 628 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 PDS5AQ29RF7 1337 aaKnown RBP15.94■□□□□ 0.14
SGCA-201ENST00000262018 GRXCR1A8MXD5 290 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 USP17L15C9J2P7 530 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 USP17L13C9JLJ4 530 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 USP17L11C9JVI0 530 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 USP17L18D6R9N7 530 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 USP17L22D6RA61 530 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 USP17L17D6RBQ6 530 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 USP17L19D6RCP7 530 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 USP17L20D6RJB6 530 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 PQBP1O60828 265 aaKnown RBP15.94■□□□□ 0.14
SGCA-201ENST00000262018 IGHA2P01877 340 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 GSTO1P78417 241 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 USP17L24Q0WX57 530 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 ZYXQ15942 572 aaKnown RBP15.94■□□□□ 0.14
SGCA-201ENST00000262018 CRACR2BQ8N4Y2 399 aaPredicted RBP15.94■□□□□ 0.14
SGCA-201ENST00000262018 PI4K2BQ8TCG2 481 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 TRIM34Q9BYJ4 488 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 GPR108Q9NPR9 543 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 TMEM39AQ9NV64 488 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 ZBTB21Q9ULJ3 1066 aa15.94■□□□□ 0.14
SGCA-201ENST00000262018 ZBTB22O15209 634 aa15.93■□□□□ 0.14
SGCA-201ENST00000262018 MFAP1P55081 439 aaKnown RBP15.93■□□□□ 0.14
SGCA-201ENST00000262018 FAM47AQ5JRC9 791 aa15.93■□□□□ 0.14
SGCA-201ENST00000262018 PRAMEF19Q5SWL8 479 aa15.93■□□□□ 0.14
SGCA-201ENST00000262018 TSHZ3Q63HK5 1081 aa15.93■□□□□ 0.14
SGCA-201ENST00000262018 OLFML2BQ68BL8 750 aa15.93■□□□□ 0.14
SGCA-201ENST00000262018 DDRGK1Q96HY6 314 aa15.93■□□□□ 0.14
SGCA-201ENST00000262018 PBX4Q9BYU1 374 aa15.93■□□□□ 0.14
SGCA-201ENST00000262018 DHX36Q9H2U1 1008 aaKnown RBP15.93■□□□□ 0.14
SGCA-201ENST00000262018 DNAJC18Q9H819 358 aa15.93■□□□□ 0.14
SGCA-201ENST00000262018 BTBD7Q9P203 1132 aa15.93■□□□□ 0.14
SGCA-201ENST00000262018 TCF20Q9UGU0 1960 aaKnown RBP15.92■□□□□ 0.14
SGCA-201ENST00000262018 A0A1B0GUL7 405 aa15.92■□□□□ 0.14
SGCA-201ENST00000262018 IFIT2P09913 472 aaKnown RBP15.92■□□□□ 0.14
SGCA-201ENST00000262018 SH3RF3Q8TEJ3 882 aaPredicted RBP15.92■□□□□ 0.14
SGCA-201ENST00000262018 NSUN4Q96CB9 384 aaKnown RBP15.92■□□□□ 0.14
SGCA-201ENST00000262018 FEZ1Q99689 392 aa15.92■□□□□ 0.14
SGCA-201ENST00000262018 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.92■□□□□ 0.14
SGCA-201ENST00000262018 TSPYL2Q9H2G4 693 aaPredicted RBP15.92■□□□□ 0.14
SGCA-201ENST00000262018 EPHX3Q9H6B9 360 aa15.92■□□□□ 0.14
SGCA-201ENST00000262018 GINM1Q9NU53 330 aa15.92■□□□□ 0.14
SGCA-201ENST00000262018 PHF24Q9UPV7 400 aa15.92■□□□□ 0.14
SGCA-201ENST00000262018 PIEZO1Q92508 2521 aa15.92■□□□□ 0.14
SGCA-201ENST00000262018 BMP1P13497 986 aa15.91■□□□□ 0.14
SGCA-201ENST00000262018 ADORA2AP29274 412 aa15.91■□□□□ 0.14
SGCA-201ENST00000262018 TIMM10P62072 90 aa15.91■□□□□ 0.14
SGCA-201ENST00000262018 CATSPERGQ6ZRH7 1159 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms