RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 RALGAPBQ86X10 1494 aa15.78■□□□□ 0.12
CUX2-201ENST00000261726 PUM3Q15397 648 aaKnown RBP15.77■□□□□ 0.12
CUX2-201ENST00000261726 ZNF594Q96JF6 807 aaPredicted RBP15.77■□□□□ 0.12
CUX2-201ENST00000261726 FAM207AQ9NSI2 230 aaPredicted RBP15.77■□□□□ 0.12
CUX2-201ENST00000261726 BAIAP2L1Q9UHR4 511 aa15.77■□□□□ 0.12
CUX2-201ENST00000261726 TAF5LO75529 589 aa15.77■□□□□ 0.12
CUX2-201ENST00000261726 KRT71Q3SY84 523 aa15.77■□□□□ 0.12
CUX2-201ENST00000261726 FAM173BQ6P4H8 233 aa15.77■□□□□ 0.12
CUX2-201ENST00000261726 RRAGAQ7L523 313 aa15.77■□□□□ 0.12
CUX2-201ENST00000261726 NLRC4Q9NPP4 1024 aa15.77■□□□□ 0.12
CUX2-201ENST00000261726 ADGRL2O95490 1459 aa15.77■□□□□ 0.12
CUX2-201ENST00000261726 STX2P32856 288 aa15.77■□□□□ 0.12
CUX2-201ENST00000261726 NONOQ15233 471 aaKnown RBP eCLIP15.77■□□□□ 0.12
CUX2-201ENST00000261726 C8orf34Q49A92 452 aa15.77■□□□□ 0.12
CUX2-201ENST00000261726 TAB3Q8N5C8 712 aaPredicted RBP15.77■□□□□ 0.12
CUX2-201ENST00000261726 NCAPGQ9BPX3 1015 aa15.77■□□□□ 0.12
CUX2-201ENST00000261726 USP26Q9BXU7 913 aa15.77■□□□□ 0.12
CUX2-201ENST00000261726 EFCC1Q9HA90 598 aa15.77■□□□□ 0.12
CUX2-201ENST00000261726 ABCC10Q5T3U5 1492 aa15.77■□□□□ 0.12
CUX2-201ENST00000261726 CUTAO60888 179 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 TRIM68Q6AZZ1 485 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.77■□□□□ 0.11
CUX2-201ENST00000261726 TRMT44Q8IYL2 757 aaKnown RBP15.77■□□□□ 0.11
CUX2-201ENST00000261726 ZNF710Q8N1W2 664 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 CCDC24Q8N4L8 307 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 INTS4Q96HW7 963 aaKnown RBP15.77■□□□□ 0.11
CUX2-201ENST00000261726 LSM14BQ9BX40 385 aaKnown RBP15.77■□□□□ 0.11
CUX2-201ENST00000261726 BAG2O95816 211 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 ABCB4P21439 1286 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 SKA2Q8WVK7 121 aaPredicted RBP15.77■□□□□ 0.11
CUX2-201ENST00000261726 KCNJ14Q9UNX9 436 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 SOS1Q07889 1333 aaPredicted RBP15.77■□□□□ 0.11
CUX2-201ENST00000261726 IFNB1P01574 187 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 GSTA1P08263 222 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 GSTA2P09210 222 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 NLRP12P59046 1061 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 MUM1Q2TAK8 710 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 FAM47CQ5HY64 1035 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 FAM102BQ5T8I3 360 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 U2AF1L4Q8WU68 220 aaKnown RBP15.77■□□□□ 0.11
CUX2-201ENST00000261726 XAGE2Q96GT9 111 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 CD2APQ9Y5K6 639 aa15.77■□□□□ 0.11
CUX2-201ENST00000261726 MAP3K5Q99683 1374 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 HVCN1Q96D96 273 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 IL1RL1Q01638 556 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 TUBB2AQ13885 445 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 PPP2R5AQ15172 486 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 TRIM50Q86XT4 487 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 CCDC13Q8IYE1 715 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 TUBB2BQ9BVA1 445 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 DCTPP1Q9H773 170 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 CBX8Q9HC52 389 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 PREX2Q70Z35 1606 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 ZNF202O95125 648 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 POSTNQ15063 836 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 CYP2J2P51589 502 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 MTMR3Q13615 1198 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 SMC5Q8IY18 1101 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 DCLK2Q8N568 766 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 KLHDC4Q8TBB5 520 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 POMGNT1Q8WZA1 660 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 ANGEL1Q9UNK9 670 aaKnown RBP15.76■□□□□ 0.11
CUX2-201ENST00000261726 PCDHB13Q9Y5F0 798 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 STK24Q9Y6E0 443 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 KRT3P12035 628 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 P4HA1P13674 534 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 CHMP6Q96FZ7 201 aa15.76■□□□□ 0.11
CUX2-201ENST00000261726 ESYT2A0FGR8 921 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 GPAA1O43292 621 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 STMN1P16949 149 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 OAS2P29728 719 aaKnown RBP15.75■□□□□ 0.11
CUX2-201ENST00000261726 OPHN1O60890 802 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 TROVE2P10155 538 aaKnown RBP eCLIP15.75■□□□□ 0.11
CUX2-201ENST00000261726 BEGAINQ9BUH8 593 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 CAPN9O14815 690 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 CNGA1P29973 690 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 VPS41P49754 854 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 TNNI3KQ59H18 835 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 GLG1Q92896 1179 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 VCX3AQ9NNX9 186 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 FPGT-TNNI3KV9GXZ4 949 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 ARHGAP25P42331 645 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 ZNF75DP51815 510 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 JADE1Q6IE81 842 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 CROCCP2Q86T23 111 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 TMTC1Q8IUR5 882 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 MMS19Q96T76 1030 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 BZW2Q9Y6E2 419 aaKnown RBP15.75■□□□□ 0.11
CUX2-201ENST00000261726 RGS16O15492 202 aaPredicted RBP15.75■□□□□ 0.11
CUX2-201ENST00000261726 HS1BP3Q53T59 392 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 KRT25Q7Z3Z0 450 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 MAPKAPK5Q8IW41 473 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 LARGE2Q8N3Y3 721 aa15.75■□□□□ 0.11
CUX2-201ENST00000261726 CASP2P42575 452 aa15.74■□□□□ 0.11
CUX2-201ENST00000261726 GBP5Q96PP8 586 aa15.74■□□□□ 0.11
CUX2-201ENST00000261726 TRIM56Q9BRZ2 755 aaKnown RBP15.74■□□□□ 0.11
CUX2-201ENST00000261726 RAB20Q9NX57 234 aa15.74■□□□□ 0.11
CUX2-201ENST00000261726 TMTC4Q5T4D3 741 aa15.74■□□□□ 0.11
CUX2-201ENST00000261726 IFIH1Q9BYX4 1025 aaKnown RBP15.74■□□□□ 0.11
CUX2-201ENST00000261726 STAM2O75886 525 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms