RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 KLF18A0A0U1RQI7 1052 aa21.76■■□□□ 1.07
COL4A3BP-201ENST00000261415 TFAP4Q01664 338 aa21.76■■□□□ 1.07
COL4A3BP-201ENST00000261415 RAD51AP2Q09MP3 1159 aa21.76■■□□□ 1.07
COL4A3BP-201ENST00000261415 WTAPQ15007 396 aa21.76■■□□□ 1.07
COL4A3BP-201ENST00000261415 SEC23AQ15436 765 aa21.76■■□□□ 1.07
COL4A3BP-201ENST00000261415 SGMS1Q86VZ5 419 aa21.76■■□□□ 1.07
COL4A3BP-201ENST00000261415 FAM151AQ8WW52 585 aa21.76■■□□□ 1.07
COL4A3BP-201ENST00000261415 SWAP70Q9UH65 585 aa21.76■■□□□ 1.07
COL4A3BP-201ENST00000261415 PDIA3P30101 505 aaKnown RBP21.75■■□□□ 1.07
COL4A3BP-201ENST00000261415 ENAHQ8N8S7 591 aaPredicted RBP21.75■■□□□ 1.07
COL4A3BP-201ENST00000261415 GTF3C6Q969F1 213 aa21.75■■□□□ 1.07
COL4A3BP-201ENST00000261415 SCN4AP35499 1836 aa21.75■■□□□ 1.07
COL4A3BP-201ENST00000261415 TSPY3P0CV98 308 aa21.75■■□□□ 1.07
COL4A3BP-201ENST00000261415 TSPY8P0CW00 308 aa21.75■■□□□ 1.07
COL4A3BP-201ENST00000261415 FAM83AQ86UY5 434 aa21.75■■□□□ 1.07
COL4A3BP-201ENST00000261415 RASSF4Q9H2L5 321 aa21.75■■□□□ 1.07
COL4A3BP-201ENST00000261415 MYH6P13533 1939 aa21.74■■□□□ 1.07
COL4A3BP-201ENST00000261415 NMT2O60551 498 aa21.74■■□□□ 1.07
COL4A3BP-201ENST00000261415 PFKFB2O60825 505 aa21.74■■□□□ 1.07
COL4A3BP-201ENST00000261415 EPS15P42566 896 aa21.74■■□□□ 1.07
COL4A3BP-201ENST00000261415 CRACR2BQ8N4Y2 399 aaPredicted RBP21.74■■□□□ 1.07
COL4A3BP-201ENST00000261415 DNAJC18Q9H819 358 aa21.74■■□□□ 1.07
COL4A3BP-201ENST00000261415 ZC3H4Q9UPT8 1303 aaKnown RBP21.74■■□□□ 1.07
COL4A3BP-201ENST00000261415 ATAD5Q96QE3 1844 aa21.73■■□□□ 1.07
COL4A3BP-201ENST00000261415 SLURP2P0DP57 97 aa21.73■■□□□ 1.07
COL4A3BP-201ENST00000261415 SHMT1P34896 483 aa21.73■■□□□ 1.07
COL4A3BP-201ENST00000261415 NFXL1Q6ZNB6 911 aa21.73■■□□□ 1.07
COL4A3BP-201ENST00000261415 TRPM4Q8TD43 1214 aa21.73■■□□□ 1.07
COL4A3BP-201ENST00000261415 CSRNP1Q96S65 589 aa21.73■■□□□ 1.07
COL4A3BP-201ENST00000261415 ASTN2O75129 1339 aaPredicted RBP21.73■■□□□ 1.07
COL4A3BP-201ENST00000261415 GOLGA8BA8MQT2 603 aa21.73■■□□□ 1.07
COL4A3BP-201ENST00000261415 SCRN1Q12765 414 aa21.73■■□□□ 1.07
COL4A3BP-201ENST00000261415 APOA5Q6Q788 366 aa21.73■■□□□ 1.07
COL4A3BP-201ENST00000261415 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.73■■□□□ 1.07
COL4A3BP-201ENST00000261415 CCDC69A6NI79 296 aa21.72■■□□□ 1.07
COL4A3BP-201ENST00000261415 PSEN1P49768 467 aa21.72■■□□□ 1.07
COL4A3BP-201ENST00000261415 FOXP4Q8IVH2 680 aaPredicted RBP21.72■■□□□ 1.07
COL4A3BP-201ENST00000261415 TMTC2Q8N394 836 aa21.72■■□□□ 1.07
COL4A3BP-201ENST00000261415 TMEM39BQ9GZU3 492 aa21.72■■□□□ 1.07
COL4A3BP-201ENST00000261415 FAM196BA6NMK8 535 aa21.72■■□□□ 1.07
COL4A3BP-201ENST00000261415 TNNT1P13805 278 aa21.72■■□□□ 1.07
COL4A3BP-201ENST00000261415 LMOD1P29536 600 aaPredicted RBP21.72■■□□□ 1.07
COL4A3BP-201ENST00000261415 METTL16Q86W50 562 aaKnown RBP21.72■■□□□ 1.07
COL4A3BP-201ENST00000261415 IL17RBQ9NRM6 502 aa21.72■■□□□ 1.07
COL4A3BP-201ENST00000261415 HACL1Q9UJ83 578 aa21.72■■□□□ 1.07
COL4A3BP-201ENST00000261415 TAOK2Q9UL54 1235 aa21.72■■□□□ 1.07
COL4A3BP-201ENST00000261415 HPS5Q9UPZ3 1129 aa21.72■■□□□ 1.07
COL4A3BP-201ENST00000261415 PLIN4Q96Q06 1357 aa21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 TNNI2P48788 182 aa21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 CCT2P78371 535 aaKnown RBP21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 TNFAIP1Q13829 316 aa21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 KMT5BQ4FZB7 885 aa21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 MUM1L1Q5H9M0 696 aa21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 IFIT1BQ5T764 474 aaKnown RBP21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 DPY19L2Q6NUT2 758 aa21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 RAB11FIP4Q86YS3 637 aa21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 TCP11L1Q9NUJ3 509 aa21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 SCAF8Q9UPN6 1271 aaKnown RBP21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 SLC12A7Q9Y666 1083 aa21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 NEDD1Q8NHV4 660 aa21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 RSPH14Q9UHP6 348 aa21.71■■□□□ 1.07
COL4A3BP-201ENST00000261415 BMS1Q14692 1282 aaKnown RBP21.7■■□□□ 1.06
COL4A3BP-201ENST00000261415 CHAMP1Q96JM3 812 aa21.7■■□□□ 1.06
COL4A3BP-201ENST00000261415 NCOA5Q9HCD5 579 aaKnown RBP21.7■■□□□ 1.06
COL4A3BP-201ENST00000261415 ZBTB43O43298 467 aa21.69■■□□□ 1.06
COL4A3BP-201ENST00000261415 NOP2P46087 812 aaKnown RBP21.69■■□□□ 1.06
COL4A3BP-201ENST00000261415 RASA3Q14644 834 aa21.69■■□□□ 1.06
COL4A3BP-201ENST00000261415 RCSD1Q6JBY9 416 aa21.69■■□□□ 1.06
COL4A3BP-201ENST00000261415 MICU3Q86XE3 530 aa21.69■■□□□ 1.06
COL4A3BP-201ENST00000261415 CDAN1Q8IWY9 1227 aa21.69■■□□□ 1.06
COL4A3BP-201ENST00000261415 AKR1B1P15121 316 aa21.69■■□□□ 1.06
COL4A3BP-201ENST00000261415 TMEM87AQ8NBN3 555 aa21.69■■□□□ 1.06
COL4A3BP-201ENST00000261415 MYL10Q9BUA6 226 aa21.69■■□□□ 1.06
COL4A3BP-201ENST00000261415 PGAP2Q9UHJ9 254 aa21.69■■□□□ 1.06
COL4A3BP-201ENST00000261415 DTNBO60941 627 aa21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 RXRAP19793 462 aa21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 GTF2A1P52655 376 aaPredicted RBP21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 HIRAP54198 1017 aaPredicted RBP21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 PLCB2Q00722 1185 aa21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 CCDC178Q5BJE1 867 aa21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 TATDN1Q6P1N9 297 aa21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 DGKHQ86XP1 1220 aa21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 ZNF654Q8IZM8 581 aa21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 L3MBTL3Q96JM7 780 aaPredicted RBP21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 ADARB2Q9NS39 739 aaKnown RBP21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 HERC5Q9UII4 1024 aaKnown RBP21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 SMC3Q9UQE7 1217 aa21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 WDR90Q96KV7 1748 aa21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 NID2Q14112 1375 aa21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 METAP2P50579 478 aaKnown RBP eCLIP21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 TEX35Q5T0J7 233 aa21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 ANGEL2Q5VTE6 544 aaKnown RBP21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 SYNE3Q6ZMZ3 975 aa21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 TXLNBQ8N3L3 684 aa21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.68■■□□□ 1.06
COL4A3BP-201ENST00000261415 GLTPD2A6NH11 291 aa21.67■■□□□ 1.06
COL4A3BP-201ENST00000261415 TRERF1Q96PN7 1200 aa21.67■■□□□ 1.06
COL4A3BP-201ENST00000261415 BRMS1Q9HCU9 246 aa21.67■■□□□ 1.06
COL4A3BP-201ENST00000261415 FOXD4L5Q5VV16 416 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms