RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 AOC2O75106 756 aa24.28■■□□□ 1.48
RTCA-201ENST00000260563 CD2BP2O95400 341 aaKnown RBP24.28■■□□□ 1.48
RTCA-201ENST00000260563 CETPP11597 493 aa24.28■■□□□ 1.48
RTCA-201ENST00000260563 HMGCS2P54868 508 aa24.28■■□□□ 1.48
RTCA-201ENST00000260563 LRRC47Q8N1G4 583 aaKnown RBP24.28■■□□□ 1.48
RTCA-201ENST00000260563 MS4A4AQ96JQ5 239 aa24.28■■□□□ 1.48
RTCA-201ENST00000260563 CCL15-CCL14A0A0B4J2E2 113 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 IFIT3O14879 490 aaKnown RBP24.27■■□□□ 1.48
RTCA-201ENST00000260563 NOVP48745 357 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 EXOSC10Q01780 885 aaKnown RBP24.27■■□□□ 1.48
RTCA-201ENST00000260563 SREBF2Q12772 1141 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 BECN1Q14457 450 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 CCL15Q16663 113 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 SH3D19Q5HYK7 790 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 USP17L2Q6R6M4 530 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 DGKHQ86XP1 1220 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 HSCBQ8IWL3 235 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 ENAHQ8N8S7 591 aaPredicted RBP24.27■■□□□ 1.48
RTCA-201ENST00000260563 TCEANC2Q96MN5 208 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 MTA3Q9BTC8 594 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 GOPCQ9HD26 462 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 TMOD4Q9NZQ9 345 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 SYNPO2Q9UMS6 1093 aa24.27■■□□□ 1.48
RTCA-201ENST00000260563 WDR19Q8NEZ3 1342 aa24.26■■□□□ 1.47
RTCA-201ENST00000260563 PARP14Q460N5 1801 aa24.26■■□□□ 1.47
RTCA-201ENST00000260563 KIF23Q02241 960 aaPredicted RBP24.26■■□□□ 1.47
RTCA-201ENST00000260563 GADL1Q6ZQY3 521 aa24.26■■□□□ 1.47
RTCA-201ENST00000260563 MKL1Q969V6 931 aa24.26■■□□□ 1.47
RTCA-201ENST00000260563 TMEM87BQ96K49 555 aa24.26■■□□□ 1.47
RTCA-201ENST00000260563 ALDH8A1Q9H2A2 487 aaPredicted RBP24.26■■□□□ 1.47
RTCA-201ENST00000260563 RAD21O60216 631 aa24.25■■□□□ 1.47
RTCA-201ENST00000260563 MCM2P49736 904 aa24.25■■□□□ 1.47
RTCA-201ENST00000260563 AK2P54819 239 aa24.25■■□□□ 1.47
RTCA-201ENST00000260563 DGKZQ13574 1117 aa24.25■■□□□ 1.47
RTCA-201ENST00000260563 IFIT1BQ5T764 474 aaKnown RBP24.25■■□□□ 1.47
RTCA-201ENST00000260563 RCSD1Q6JBY9 416 aa24.25■■□□□ 1.47
RTCA-201ENST00000260563 FASTKD5Q7L8L6 764 aaKnown RBP24.25■■□□□ 1.47
RTCA-201ENST00000260563 PROCA1Q8NCQ7 364 aaPredicted RBP24.25■■□□□ 1.47
RTCA-201ENST00000260563 ZIC5Q96T25 663 aa24.25■■□□□ 1.47
RTCA-201ENST00000260563 VCPKMTQ9H867 229 aa24.25■■□□□ 1.47
RTCA-201ENST00000260563 TOP1P11387 765 aaKnown RBP24.25■■□□□ 1.47
RTCA-201ENST00000260563 MAP2K2P36507 400 aa24.25■■□□□ 1.47
RTCA-201ENST00000260563 WTAPQ15007 396 aa24.25■■□□□ 1.47
RTCA-201ENST00000260563 SEC23AQ15436 765 aa24.25■■□□□ 1.47
RTCA-201ENST00000260563 TMEM67Q5HYA8 995 aa24.25■■□□□ 1.47
RTCA-201ENST00000260563 C12orf42Q96LP6 360 aa24.25■■□□□ 1.47
RTCA-201ENST00000260563 TMEM47Q9BQJ4 181 aa24.25■■□□□ 1.47
RTCA-201ENST00000260563 INHBEP58166 350 aa24.24■■□□□ 1.47
RTCA-201ENST00000260563 Q6ZUG5 572 aa24.24■■□□□ 1.47
RTCA-201ENST00000260563 REM2Q8IYK8 340 aaPredicted RBP24.24■■□□□ 1.47
RTCA-201ENST00000260563 BRI3BPQ8WY22 251 aa24.24■■□□□ 1.47
RTCA-201ENST00000260563 LPAR1Q92633 364 aa24.24■■□□□ 1.47
RTCA-201ENST00000260563 LRRC2Q9BYS8 371 aa24.24■■□□□ 1.47
RTCA-201ENST00000260563 KAT14Q9H8E8 782 aa24.24■■□□□ 1.47
RTCA-201ENST00000260563 EMILIN3Q9NT22 766 aa24.24■■□□□ 1.47
RTCA-201ENST00000260563 TESPA1A2RU30 521 aaPredicted RBP24.23■■□□□ 1.47
RTCA-201ENST00000260563 SH2B2O14492 632 aaPredicted RBP24.23■■□□□ 1.47
RTCA-201ENST00000260563 ANKRD1Q15327 319 aa24.23■■□□□ 1.47
RTCA-201ENST00000260563 GMCL1P1Q8NEA9 526 aa24.23■■□□□ 1.47
RTCA-201ENST00000260563 ANKS1AQ92625 1134 aa24.23■■□□□ 1.47
RTCA-201ENST00000260563 IPO9Q96P70 1041 aaKnown RBP24.23■■□□□ 1.47
RTCA-201ENST00000260563 VCAM1P19320 739 aa24.22■■□□□ 1.47
RTCA-201ENST00000260563 FGD1P98174 961 aa24.22■■□□□ 1.47
RTCA-201ENST00000260563 MOGSQ13724 837 aa24.22■■□□□ 1.47
RTCA-201ENST00000260563 IGDCC4Q8TDY8 1250 aa24.22■■□□□ 1.47
RTCA-201ENST00000260563 F5H6K3 240 aa24.21■■□□□ 1.47
RTCA-201ENST00000260563 K7ELQ4 463 aaPredicted RBP24.21■■□□□ 1.47
RTCA-201ENST00000260563 KLRC3Q07444 240 aa24.21■■□□□ 1.47
RTCA-201ENST00000260563 TOB2Q14106 344 aaPredicted RBP24.21■■□□□ 1.47
RTCA-201ENST00000260563 NOL8Q76FK4 1167 aaKnown RBP24.21■■□□□ 1.47
RTCA-201ENST00000260563 SPICE1Q8N0Z3 855 aa24.21■■□□□ 1.47
RTCA-201ENST00000260563 FBXL16Q8N461 479 aa24.21■■□□□ 1.47
RTCA-201ENST00000260563 PNMA1Q8ND90 353 aa24.21■■□□□ 1.47
RTCA-201ENST00000260563 LY9Q9HBG7 655 aa24.21■■□□□ 1.47
RTCA-201ENST00000260563 AGTPBP1Q9UPW5 1226 aa24.21■■□□□ 1.47
RTCA-201ENST00000260563 CEP350Q5VT06 3117 aa24.21■■□□□ 1.47
RTCA-201ENST00000260563 NDUFB10O96000 172 aa24.2■■□□□ 1.47
RTCA-201ENST00000260563 TM4SF4P48230 202 aa24.2■■□□□ 1.47
RTCA-201ENST00000260563 TREML2Q5T2D2 321 aa24.2■■□□□ 1.47
RTCA-201ENST00000260563 AGXT2Q9BYV1 514 aa24.2■■□□□ 1.47
RTCA-201ENST00000260563 MTMR7Q9Y216 660 aa24.2■■□□□ 1.47
RTCA-201ENST00000260563 BTBD19C9JJ37 291 aa24.2■■□□□ 1.46
RTCA-201ENST00000260563 WDR46O15213 610 aaKnown RBP24.2■■□□□ 1.46
RTCA-201ENST00000260563 LIFRP42702 1097 aa24.2■■□□□ 1.46
RTCA-201ENST00000260563 KIAA1755Q5JYT7 1200 aa24.2■■□□□ 1.46
RTCA-201ENST00000260563 SLFN13Q68D06 897 aa24.2■■□□□ 1.46
RTCA-201ENST00000260563 OTUD7BQ6GQQ9 843 aa24.2■■□□□ 1.46
RTCA-201ENST00000260563 ANKRD23Q86SG2 305 aa24.2■■□□□ 1.46
RTCA-201ENST00000260563 IFNL1Q8IU54 200 aa24.2■■□□□ 1.46
RTCA-201ENST00000260563 DNAJC5GQ8N7S2 189 aa24.2■■□□□ 1.46
RTCA-201ENST00000260563 RLFQ13129 1914 aa24.19■■□□□ 1.46
RTCA-201ENST00000260563 IGF2BP3O00425 579 aaKnown RBP eCLIP24.19■■□□□ 1.46
RTCA-201ENST00000260563 PABPC4Q13310 644 aaKnown RBP eCLIP24.19■■□□□ 1.467e-28■■□□□ 14.5
RTCA-201ENST00000260563 GPAT2Q6NUI2 795 aa24.19■■□□□ 1.46
RTCA-201ENST00000260563 NFXL1Q6ZNB6 911 aa24.19■■□□□ 1.46
RTCA-201ENST00000260563 TMTC2Q8N394 836 aa24.19■■□□□ 1.46
RTCA-201ENST00000260563 BRF1Q92994 677 aa24.19■■□□□ 1.46
RTCA-201ENST00000260563 PTPN18Q99952 460 aa24.19■■□□□ 1.46
RTCA-201ENST00000260563 SENP2Q9HC62 589 aa24.19■■□□□ 1.46
RTCA-201ENST00000260563 GPHNQ9NQX3 736 aaPredicted RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms