RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 KIAA1524Q8TCG1 905 aa15.05■□□□□ -0
PRPF38A-201ENST00000257181 ZNF274Q96GC6 653 aaPredicted RBP15.05■□□□□ -0
PRPF38A-201ENST00000257181 USP44Q9H0E7 712 aa15.05■□□□□ -0
PRPF38A-201ENST00000257181 PCDHB13Q9Y5F0 798 aa15.05■□□□□ -0
PRPF38A-201ENST00000257181 LETM2Q2VYF4 491 aa15.05■□□□□ -0
PRPF38A-201ENST00000257181 TBC1D9BQ66K14 1250 aa15.05■□□□□ -0
PRPF38A-201ENST00000257181 TTLL11Q8NHH1 800 aa15.05■□□□□ -0
PRPF38A-201ENST00000257181 ABCB11O95342 1321 aa15.05■□□□□ -0
PRPF38A-201ENST00000257181 VWDEQ8N2E2 1590 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 USP17L15C9J2P7 530 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 USP17L13C9JLJ4 530 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 TMEM232C9JQI7 657 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 USP17L11C9JVI0 530 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 USP17L18D6R9N7 530 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 USP17L22D6RA61 530 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 USP17L17D6RBQ6 530 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 USP17L19D6RCP7 530 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 USP17L20D6RJB6 530 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 GUCY1B3Q02153 619 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 USP17L24Q0WX57 530 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 CCDC102AQ96A19 550 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 PSDA5PKW4 1024 aaPredicted RBP15.04■□□□□ -0
PRPF38A-201ENST00000257181 KCNQ3O43525 872 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 POSTNQ15063 836 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 SURF1Q15526 300 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 CLUL1Q15846 466 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 SYDE2Q5VT97 1194 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 SLC27A2O14975 620 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 NEFHP12036 1026 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 CYLC1P35663 651 aaPredicted RBP15.04■□□□□ -0
PRPF38A-201ENST00000257181 TRAPPC10P48553 1259 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 NACC1Q96RE7 527 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 NUP88Q99567 741 aaPredicted RBP15.04■□□□□ -0
PRPF38A-201ENST00000257181 NOC2LQ9Y3T9 749 aaKnown RBP15.04■□□□□ -0
PRPF38A-201ENST00000257181 CLRN2A0PK11 232 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 USP8P40818 1118 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 CCDC14Q49A88 953 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 CD209Q9NNX6 404 aa15.04■□□□□ -0
PRPF38A-201ENST00000257181 CCDC169A6NNP5 214 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 SFPQP23246 707 aaKnown RBP eCLIP15.03■□□□□ -0
PRPF38A-201ENST00000257181 PAFAH1B1P43034 410 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 PNMA1Q8ND90 353 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 ADARB2Q9NS39 739 aaKnown RBP15.03■□□□□ -0
PRPF38A-201ENST00000257181 USP42Q9H9J4 1324 aaKnown RBP15.03■□□□□ -0
PRPF38A-201ENST00000257181 GOLGA6L10A0A0M3HER8 536 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 TUBB4AP04350 444 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 MARCH10Q8NA82 808 aaPredicted RBP15.03■□□□□ -0
PRPF38A-201ENST00000257181 TCP11Q8WWU5 503 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 RPS6KC1Q96S38 1066 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 SGSM2O43147 1006 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 KIF5CO60282 957 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 RCAN1P53805 252 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 ALCAMQ13740 583 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 UVSSAQ2YD98 709 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 FAM182BQ5T319 152 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 CCDC112Q8NEF3 446 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 RAET1EQ8TD07 263 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 LRWD1Q9UFC0 647 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 CCNT1O60563 726 aaKnown RBP15.03■□□□□ -0
PRPF38A-201ENST00000257181 ELP1O95163 1332 aa15.03■□□□□ -0
PRPF38A-201ENST00000257181 CARNS1A5YM72 827 aa15.02■□□□□ -0
PRPF38A-201ENST00000257181 SASH1O94885 1247 aa15.02■□□□□ -0
PRPF38A-201ENST00000257181 TTC38Q5R3I4 469 aa15.02■□□□□ -0
PRPF38A-201ENST00000257181 METTL23Q86XA0 190 aa15.02■□□□□ -0
PRPF38A-201ENST00000257181 CUTAO60888 179 aa15.02■□□□□ -0
PRPF38A-201ENST00000257181 MCM7P33993 719 aa15.02■□□□□ -0
PRPF38A-201ENST00000257181 ORC2Q13416 577 aaPredicted RBP15.02■□□□□ -0
PRPF38A-201ENST00000257181 FERMT3Q86UX7 667 aa15.02■□□□□ -0
PRPF38A-201ENST00000257181 NSMCE1Q8WV22 266 aa15.02■□□□□ -0
PRPF38A-201ENST00000257181 SLF1Q9BQI6 1058 aa15.02■□□□□ -0
PRPF38A-201ENST00000257181 USP17L10C9JJH3 530 aa15.02□□□□□ -0.01
PRPF38A-201ENST00000257181 VEGFAP15692 232 aaPredicted RBP15.02□□□□□ -0.01
PRPF38A-201ENST00000257181 AP3B2Q13367 1082 aa15.02□□□□□ -0.01
PRPF38A-201ENST00000257181 LIN9Q5TKA1 542 aa15.02□□□□□ -0.01
PRPF38A-201ENST00000257181 KLHL10Q6JEL2 608 aa15.02□□□□□ -0.01
PRPF38A-201ENST00000257181 LBHD1Q9BQE6 289 aaPredicted RBP15.02□□□□□ -0.01
PRPF38A-201ENST00000257181 ZBTB21Q9ULJ3 1066 aa15.02□□□□□ -0.01
PRPF38A-201ENST00000257181 GTF2A2P52657 109 aa15.02□□□□□ -0.01
PRPF38A-201ENST00000257181 ZNF654Q8IZM8 581 aa15.02□□□□□ -0.01
PRPF38A-201ENST00000257181 LPAR1Q92633 364 aa15.02□□□□□ -0.01
PRPF38A-201ENST00000257181 TNNC2P02585 160 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 NCAPH2Q6IBW4 605 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 HHIPL2Q6UWX4 724 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 FAM200AQ8TCP9 573 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 TMEM131LA2VDJ0 1609 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 TESPA1A2RU30 521 aaPredicted RBP15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 SMCO2A6NFE2 343 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 KBTBD13C9JR72 458 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 EZH2Q15910 746 aaKnown RBP15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 CCDC97Q96F63 343 aaPredicted RBP15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 KATNAL1Q9BW62 490 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 CUEDC2Q9H467 287 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 V9GY48 417 aaPredicted RBP15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 SLC25A27O95847 323 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 RSBN1LQ6PCB5 846 aaPredicted RBP15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 OSBPL5Q9H0X9 879 aaPredicted RBP15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 PRPF6O94906 941 aaKnown RBP15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 TRIM14Q14142 442 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 SMC1BQ8NDV3 1235 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 ADGRB2O60241 1585 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms