RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 USP17L19D6RCP7 530 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 USP17L20D6RJB6 530 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 SGSM2O43147 1006 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 PEX10O60683 326 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 GCLCP48506 637 aaPredicted RBP16.9■□□□□ 0.3
CNN1-201ENST00000252456 USP17L24Q0WX57 530 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 FAM110CQ1W6H9 321 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 CATSPERGQ6ZRH7 1159 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 ANKRD13CQ8N6S4 541 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 RPAP3Q9H6T3 665 aaPredicted RBP16.9■□□□□ 0.3
CNN1-201ENST00000252456 MTMR4Q9NYA4 1195 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 NYAP2Q9P242 653 aa16.9■□□□□ 0.3
CNN1-201ENST00000252456 TFAP4Q01664 338 aa16.89■□□□□ 0.29
CNN1-201ENST00000252456 ATP2B2Q01814 1243 aa16.89■□□□□ 0.29
CNN1-201ENST00000252456 PKN2Q16513 984 aaKnown RBP16.89■□□□□ 0.29
CNN1-201ENST00000252456 FBXO46Q6PJ61 603 aaPredicted RBP16.89■□□□□ 0.29
CNN1-201ENST00000252456 SPICE1Q8N0Z3 855 aa16.89■□□□□ 0.29
CNN1-201ENST00000252456 LPAR1Q92633 364 aa16.89■□□□□ 0.29
CNN1-201ENST00000252456 SH2D4AQ9H788 454 aa16.89■□□□□ 0.29
CNN1-201ENST00000252456 TXNRD2Q9NNW7 524 aa16.89■□□□□ 0.29
CNN1-201ENST00000252456 MORF4L1Q9UBU8 362 aa16.89■□□□□ 0.29
CNN1-201ENST00000252456 ECM2O94769 699 aaPredicted RBP16.88■□□□□ 0.29
CNN1-201ENST00000252456 TSPY3P0CV98 308 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 TSPY8P0CW00 308 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 IL17RBQ9NRM6 502 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 PPP4R2Q9NY27 417 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 RBPJLQ9UBG7 517 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 PLXNB2O15031 1838 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 PSMC4P43686 418 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 PTH1RQ03431 593 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 AKNAD1Q5T1N1 836 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 LBX2Q6XYB7 198 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 STAG1Q8WVM7 1258 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 RUFY2Q8WXA3 655 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 MKL1Q969V6 931 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 PTPN22Q9Y2R2 807 aa16.88■□□□□ 0.29
CNN1-201ENST00000252456 NEDD4P46934 1319 aa16.87■□□□□ 0.29
CNN1-201ENST00000252456 COL11A1P12107 1806 aaPredicted RBP16.87■□□□□ 0.29
CNN1-201ENST00000252456 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
CNN1-201ENST00000252456 NMT2O60551 498 aa16.87■□□□□ 0.29
CNN1-201ENST00000252456 KIF22Q14807 665 aa16.87■□□□□ 0.29
CNN1-201ENST00000252456 HPS5Q9UPZ3 1129 aa16.87■□□□□ 0.29
CNN1-201ENST00000252456 TSPY2A6NKD2 308 aa16.86■□□□□ 0.29
CNN1-201ENST00000252456 WDR46O15213 610 aaKnown RBP16.86■□□□□ 0.29
CNN1-201ENST00000252456 RANBP6O60518 1105 aaKnown RBP16.86■□□□□ 0.29
CNN1-201ENST00000252456 CNMDO75829 334 aa16.86■□□□□ 0.29
CNN1-201ENST00000252456 TTLL1O95922 423 aa16.86■□□□□ 0.29
CNN1-201ENST00000252456 NOVP48745 357 aa16.86■□□□□ 0.29
CNN1-201ENST00000252456 CLIP2Q9UDT6 1046 aa16.86■□□□□ 0.29
CNN1-201ENST00000252456 F5H6K3 240 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 ZNF213O14771 459 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 GNRH1P01148 92 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 PCP11498 1178 aaKnown RBP16.85■□□□□ 0.29
CNN1-201ENST00000252456 KLRC3Q07444 240 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 IFFO2Q5TF58 517 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 LRRC47Q8N1G4 583 aaKnown RBP16.85■□□□□ 0.29
CNN1-201ENST00000252456 TANGO6Q9C0B7 1094 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 GOPCQ9HD26 462 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 SYNPO2Q9UMS6 1093 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 FMNL1O95466 1100 aaPredicted RBP16.85■□□□□ 0.29
CNN1-201ENST00000252456 NDUFB10O96000 172 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 FCGRTP55899 365 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 ERVK-9P63128 1117 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 ERVK-24P63145 666 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 ARHGEF6Q15052 776 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 Q3C1V9 767 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 RRP12Q5JTH9 1297 aaKnown RBP16.85■□□□□ 0.29
CNN1-201ENST00000252456 MFSD6Q6ZSS7 791 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 NUP88Q99567 741 aaPredicted RBP16.85■□□□□ 0.29
CNN1-201ENST00000252456 FBXO28Q9NVF7 368 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 BTBD7Q9P203 1132 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 SRRDQ9UH36 339 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 PTCH2Q9Y6C5 1203 aa16.85■□□□□ 0.29
CNN1-201ENST00000252456 COG2Q14746 738 aa16.84■□□□□ 0.29
CNN1-201ENST00000252456 IMMTQ16891 758 aaKnown RBP16.84■□□□□ 0.29
CNN1-201ENST00000252456 FAM83BQ5T0W9 1011 aa16.84■□□□□ 0.29
CNN1-201ENST00000252456 GTF3C2Q8WUA4 911 aaPredicted RBP16.84■□□□□ 0.29
CNN1-201ENST00000252456 ESYT1Q9BSJ8 1104 aa16.84■□□□□ 0.29
CNN1-201ENST00000252456 PAGR1Q9BTK6 254 aa16.84■□□□□ 0.29
CNN1-201ENST00000252456 RNF41Q9H4P4 317 aaPredicted RBP16.84■□□□□ 0.29
CNN1-201ENST00000252456 TOMM22Q9NS69 142 aa16.84■□□□□ 0.29
CNN1-201ENST00000252456 CTNNA3Q9UI47 895 aa16.84■□□□□ 0.29
CNN1-201ENST00000252456 RABGAP1Q9Y3P9 1069 aa16.84■□□□□ 0.29
CNN1-201ENST00000252456 DSG3P32926 999 aa16.83■□□□□ 0.28
CNN1-201ENST00000252456 PRKCZQ05513 592 aa16.83■□□□□ 0.28
CNN1-201ENST00000252456 RCSD1Q6JBY9 416 aa16.83■□□□□ 0.28
CNN1-201ENST00000252456 GMCL1P1Q8NEA9 526 aa16.83■□□□□ 0.28
CNN1-201ENST00000252456 GPRC5AQ8NFJ5 357 aa16.83■□□□□ 0.28
CNN1-201ENST00000252456 MAP4K1Q92918 833 aa16.83■□□□□ 0.28
CNN1-201ENST00000252456 PORCNQ9H237 461 aa16.83■□□□□ 0.28
CNN1-201ENST00000252456 TCP11L1Q9NUJ3 509 aa16.83■□□□□ 0.28
CNN1-201ENST00000252456 GABRQQ9UN88 632 aa16.83■□□□□ 0.28
CNN1-201ENST00000252456 STX8Q9UNK0 236 aa16.83■□□□□ 0.28
CNN1-201ENST00000252456 TAF6LQ9Y6J9 622 aa16.83■□□□□ 0.28
CNN1-201ENST00000252456 MYPNQ86TC9 1320 aa16.83■□□□□ 0.28
CNN1-201ENST00000252456 TNPO2O14787 897 aaKnown RBP16.82■□□□□ 0.28
CNN1-201ENST00000252456 FLOT1O75955 427 aa16.82■□□□□ 0.28
CNN1-201ENST00000252456 CYP21A2P08686 494 aa16.82■□□□□ 0.28
CNN1-201ENST00000252456 RASGRP2Q7LDG7 609 aa16.82■□□□□ 0.28
CNN1-201ENST00000252456 ATG4CQ96DT6 458 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms