RNA–Protein interactions for RNA: ENST00000249289.4

ATP6V1F-201, Transcript of ATPase H+ transporting V1 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1F, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1F-201ENST00000249289 MTA3Q9BTC8 594 aa17.85■□□□□ 0.45
ATP6V1F-201ENST00000249289 EMILIN3Q9NT22 766 aa17.85■□□□□ 0.45
ATP6V1F-201ENST00000249289 AGTPBP1Q9UPW5 1226 aa17.85■□□□□ 0.45
ATP6V1F-201ENST00000249289 WDR19Q8NEZ3 1342 aa17.84■□□□□ 0.45
ATP6V1F-201ENST00000249289 IGF2BP3O00425 579 aaKnown RBP eCLIP17.84■□□□□ 0.45
ATP6V1F-201ENST00000249289 ALDH1A1P00352 501 aa17.84■□□□□ 0.45
ATP6V1F-201ENST00000249289 HMGB1P09429 215 aaKnown RBP17.84■□□□□ 0.45
ATP6V1F-201ENST00000249289 TOP1P11387 765 aaKnown RBP17.84■□□□□ 0.45
ATP6V1F-201ENST00000249289 ANAPC15P60006 121 aa17.84■□□□□ 0.45
ATP6V1F-201ENST00000249289 PABPC4Q13310 644 aaKnown RBP eCLIP17.84■□□□□ 0.451e-21■■■□□ 17.6
ATP6V1F-201ENST00000249289 LRRC47Q8N1G4 583 aaKnown RBP17.84■□□□□ 0.45
ATP6V1F-201ENST00000249289 GMCL1P1Q8NEA9 526 aa17.84■□□□□ 0.45
ATP6V1F-201ENST00000249289 PTPN18Q99952 460 aa17.84■□□□□ 0.45
ATP6V1F-201ENST00000249289 ZKSCAN3Q9BRR0 538 aa17.84■□□□□ 0.45
ATP6V1F-201ENST00000249289 SLC45A1Q9Y2W3 748 aa17.84■□□□□ 0.45
ATP6V1F-201ENST00000249289 ERICH2A1L162 156 aa17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 BTBD19C9JJ37 291 aa17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 VCAM1P19320 739 aa17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 PSMA5P28066 241 aa17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 ANTXR2P58335 489 aa17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 DGKZQ13574 1117 aa17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 ADCK5Q3MIX3 580 aa17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 RCSD1Q6JBY9 416 aa17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 GPAT2Q6NUI2 795 aa17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 FAM43AQ8N2R8 423 aa17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 ENAHQ8N8S7 591 aaPredicted RBP17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 ANKS1AQ92625 1134 aa17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 JAKMIP1Q96N16 626 aaKnown RBP17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 UPF2Q9HAU5 1272 aaKnown RBP17.83■□□□□ 0.44
ATP6V1F-201ENST00000249289 IFIT3O14879 490 aaKnown RBP17.82■□□□□ 0.44
ATP6V1F-201ENST00000249289 WDR46O15213 610 aaKnown RBP17.82■□□□□ 0.44
ATP6V1F-201ENST00000249289 PRC1O43663 620 aa17.82■□□□□ 0.44
ATP6V1F-201ENST00000249289 SEC23AQ15436 765 aa17.82■□□□□ 0.44
ATP6V1F-201ENST00000249289 TREML2Q5T2D2 321 aa17.82■□□□□ 0.44
ATP6V1F-201ENST00000249289 TMEM87BQ96K49 555 aa17.82■□□□□ 0.44
ATP6V1F-201ENST00000249289 TMEM47Q9BQJ4 181 aa17.82■□□□□ 0.44
ATP6V1F-201ENST00000249289 BEGAINQ9BUH8 593 aa17.82■□□□□ 0.44
ATP6V1F-201ENST00000249289 PNMA3Q9UL41 463 aa17.82■□□□□ 0.44
ATP6V1F-201ENST00000249289 F5H6K3 240 aa17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 PDHXO00330 501 aa17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 CA12O43570 354 aa17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 RAD21O60216 631 aa17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 NDUFB10O96000 172 aa17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 HOXA7P31268 230 aaPredicted RBP17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 KLRC3Q07444 240 aa17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 TMEM67Q5HYA8 995 aa17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 IFIT1BQ5T764 474 aaKnown RBP17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 BLOC1S2Q6QNY1 142 aa17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 DHX32Q7L7V1 743 aaKnown RBP17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 PARK7Q99497 189 aaKnown RBP17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 TM6SF1Q9BZW5 370 aa17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 KAT14Q9H8E8 782 aa17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 SAGE1Q9NXZ1 904 aa17.81■□□□□ 0.44
ATP6V1F-201ENST00000249289 WTAPQ15007 396 aa17.8■□□□□ 0.44
ATP6V1F-201ENST00000249289 TAF1CQ15572 869 aaPredicted RBP17.8■□□□□ 0.44
ATP6V1F-201ENST00000249289 KIAA1755Q5JYT7 1200 aa17.8■□□□□ 0.44
ATP6V1F-201ENST00000249289 SLFN13Q68D06 897 aa17.8■□□□□ 0.44
ATP6V1F-201ENST00000249289 CHST3Q7LGC8 479 aa17.8■□□□□ 0.44
ATP6V1F-201ENST00000249289 SPICE1Q8N0Z3 855 aa17.8■□□□□ 0.44
ATP6V1F-201ENST00000249289 IL17RAQ96F46 866 aa17.8■□□□□ 0.44
ATP6V1F-201ENST00000249289 BACH2Q9BYV9 841 aa17.8■□□□□ 0.44
ATP6V1F-201ENST00000249289 RPAP3Q9H6T3 665 aaPredicted RBP17.8■□□□□ 0.44
ATP6V1F-201ENST00000249289 WBP1LQ9NX94 342 aa17.8■□□□□ 0.44
ATP6V1F-201ENST00000249289 USP17L15C9J2P7 530 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 USP17L13C9JLJ4 530 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 USP17L11C9JVI0 530 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 USP17L18D6R9N7 530 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 USP17L22D6RA61 530 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 USP17L17D6RBQ6 530 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 USP17L19D6RCP7 530 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 USP17L20D6RJB6 530 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 CASTP20810 708 aaKnown RBP17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 OSBPP22059 807 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 IRX3P78415 501 aaPredicted RBP17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 USP17L24Q0WX57 530 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 COL9A3Q14050 684 aaPredicted RBP17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 PNMA1Q8ND90 353 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 IGDCC4Q8TDY8 1250 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 GMCL1Q96IK5 515 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 CFHR5Q9BXR6 569 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 TANGO6Q9C0B7 1094 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 RNF186Q9NXI6 227 aa17.79■□□□□ 0.44
ATP6V1F-201ENST00000249289 SH2B2O14492 632 aaPredicted RBP17.78■□□□□ 0.44
ATP6V1F-201ENST00000249289 RPS6KB1P23443 525 aa17.78■□□□□ 0.44
ATP6V1F-201ENST00000249289 EXOSC10Q01780 885 aaKnown RBP17.78■□□□□ 0.44
ATP6V1F-201ENST00000249289 TMTC2Q8N394 836 aa17.78■□□□□ 0.44
ATP6V1F-201ENST00000249289 DCAF4Q8WV16 495 aa17.78■□□□□ 0.44
ATP6V1F-201ENST00000249289 ASCC2Q9H1I8 757 aaPredicted RBP17.78■□□□□ 0.44
ATP6V1F-201ENST00000249289 LY9Q9HBG7 655 aa17.78■□□□□ 0.44
ATP6V1F-201ENST00000249289 ZFYVE28Q9HCC9 887 aa17.78■□□□□ 0.44
ATP6V1F-201ENST00000249289 ZSWIM6Q9HCJ5 1215 aa17.78■□□□□ 0.44
ATP6V1F-201ENST00000249289 PARP14Q460N5 1801 aa17.77■□□□□ 0.44
ATP6V1F-201ENST00000249289 TRPA1O75762 1119 aa17.77■□□□□ 0.44
ATP6V1F-201ENST00000249289 LIFRP42702 1097 aa17.77■□□□□ 0.44
ATP6V1F-201ENST00000249289 SLC1A4P43007 532 aa17.77■□□□□ 0.44
ATP6V1F-201ENST00000249289 CRHR2Q13324 411 aa17.77■□□□□ 0.44
ATP6V1F-201ENST00000249289 FAM83BQ5T0W9 1011 aa17.77■□□□□ 0.44
ATP6V1F-201ENST00000249289 CATSPERGQ6ZRH7 1159 aa17.77■□□□□ 0.44
ATP6V1F-201ENST00000249289 SMCR8Q8TEV9 937 aaPredicted RBP17.77■□□□□ 0.44
ATP6V1F-201ENST00000249289 C22orf23Q9BZE7 217 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms