RNA–Protein interactions for RNA: ENST00000248151.4

TUBBP1-201, Transcript of tubulin beta pseudogene 1, humanhuman

BASIC

Gene TUBBP1, Length 1,335 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP1-201ENST00000248151 ZNF296Q8WUU4 475 aaPredicted RBP13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 NUP88Q99567 741 aaPredicted RBP13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 RNF41Q9H4P4 317 aaPredicted RBP13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 RPAP3Q9H6T3 665 aaPredicted RBP13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 STX8Q9UNK0 236 aa13.13□□□□□ -0.31
TUBBP1-201ENST00000248151 RLFQ13129 1914 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 F5H6K3 240 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 TLR2O60603 784 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 TTLL1O95922 423 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 VCAM1P19320 739 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 OSBPP22059 807 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 USP14P54578 494 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 CAP1Q01518 475 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 KLRC3Q07444 240 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 POTEEQ6S8J3 1075 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 CATSPERGQ6ZRH7 1159 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 ESR2Q92731 530 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 MKL1Q969V6 931 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 VCPKMTQ9H867 229 aa13.12□□□□□ -0.31
TUBBP1-201ENST00000248151 MGAMO43451 1857 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 COL11A1P12107 1806 aaPredicted RBP13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 USP17L15C9J2P7 530 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 USP17L13C9JLJ4 530 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 USP17L11C9JVI0 530 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 USP17L18D6R9N7 530 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 USP17L22D6RA61 530 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 USP17L17D6RBQ6 530 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 USP17L19D6RCP7 530 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 USP17L20D6RJB6 530 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 HOXA7P31268 230 aaPredicted RBP13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 IRX3P78415 501 aaPredicted RBP13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 USP17L24Q0WX57 530 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 FAM83BQ5T0W9 1011 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 RASGRP2Q7LDG7 609 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 ANKRD13CQ8N6S4 541 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 C12orf42Q96LP6 360 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 TMEM47Q9BQJ4 181 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 TANGO6Q9C0B7 1094 aa13.11□□□□□ -0.31
TUBBP1-201ENST00000248151 PARP14Q460N5 1801 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 SMCHD1A6NHR9 2005 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 FKTNO75072 461 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 SEC24BO95487 1268 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 NDUFB10O96000 172 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 PCP11498 1178 aaKnown RBP13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 MCCP23508 829 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 COL13A1Q5TAT6 717 aaPredicted RBP13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 RCSD1Q6JBY9 416 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 C17orf99Q6UX52 265 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 CD99L2Q8TCZ2 262 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 SMCR8Q8TEV9 937 aaPredicted RBP13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 PARK7Q99497 189 aaKnown RBP13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 CFHR5Q9BXR6 569 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 KRT23Q9C075 422 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 ARHGAP39Q9C0H5 1083 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 GOPCQ9HD26 462 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 ZCCHC17Q9NP64 241 aaKnown RBP13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 TCP11L1Q9NUJ3 509 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 FBXO28Q9NVF7 368 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 SLC45A1Q9Y2W3 748 aa13.1□□□□□ -0.31
TUBBP1-201ENST00000248151 PLIN4Q96Q06 1357 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 HERVK_113P62684 666 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 SP3Q02447 781 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 TRDNQ13061 729 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 PABPC4Q13310 644 aaKnown RBP eCLIP13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 Q3C1V9 767 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 ADCK5Q3MIX3 580 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 SLFN13Q68D06 897 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 NCOA7Q8NI08 942 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 ZSCAN10Q96SZ4 725 aaPredicted RBP13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 PAGR1Q9BTK6 254 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 CNNM2Q9H8M5 875 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 SENP2Q9HC62 589 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 TXNRD2Q9NNW7 524 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 GPHNQ9NQX3 736 aaPredicted RBP13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 RBPJLQ9UBG7 517 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 PNMA3Q9UL41 463 aa13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 ISY1Q9ULR0 285 aaKnown RBP13.09□□□□□ -0.31
TUBBP1-201ENST00000248151 ZNFX1Q9P2E3 1918 aaKnown RBP13.08□□□□□ -0.31
TUBBP1-201ENST00000248151 ADGRA2Q96PE1 1338 aa13.08□□□□□ -0.31
TUBBP1-201ENST00000248151 FLOT1O75955 427 aa13.08□□□□□ -0.32
TUBBP1-201ENST00000248151 CPA1P15085 419 aa13.08□□□□□ -0.32
TUBBP1-201ENST00000248151 CTGFP29279 349 aa13.08□□□□□ -0.32
TUBBP1-201ENST00000248151 ANTXR2P58335 489 aa13.08□□□□□ -0.32
TUBBP1-201ENST00000248151 COG2Q14746 738 aa13.08□□□□□ -0.32
TUBBP1-201ENST00000248151 RALYLQ86SE5 291 aaKnown RBP13.08□□□□□ -0.32
TUBBP1-201ENST00000248151 ENAHQ8N8S7 591 aaPredicted RBP13.08□□□□□ -0.32
TUBBP1-201ENST00000248151 USP26Q9BXU7 913 aa13.08□□□□□ -0.32
TUBBP1-201ENST00000248151 LRRC2Q9BYS8 371 aa13.08□□□□□ -0.32
TUBBP1-201ENST00000248151 PRDM10Q9NQV6 1147 aa13.08□□□□□ -0.32
TUBBP1-201ENST00000248151 BAZ2BQ9UIF8 2168 aaKnown RBP13.07□□□□□ -0.32
TUBBP1-201ENST00000248151 IFIT3O14879 490 aaKnown RBP13.07□□□□□ -0.32
TUBBP1-201ENST00000248151 WDR46O15213 610 aaKnown RBP13.07□□□□□ -0.32
TUBBP1-201ENST00000248151 REC8O95072 547 aa13.07□□□□□ -0.32
TUBBP1-201ENST00000248151 BCRP11274 1271 aa13.07□□□□□ -0.32
TUBBP1-201ENST00000248151 TOP1P11387 765 aaKnown RBP13.07□□□□□ -0.32
TUBBP1-201ENST00000248151 DSG3P32926 999 aa13.07□□□□□ -0.32
TUBBP1-201ENST00000248151 NOVP48745 357 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms