RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 MORC2Q9Y6X9 1032 aaPredicted RBP14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 COL18A1P39060 1754 aa14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 IPO7O95373 1038 aaKnown RBP14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 ERCC5P28715 1186 aaPredicted RBP14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 MDM2Q00987 491 aaPredicted RBP14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 CUL4BQ13620 913 aa14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 TMTC3Q6ZXV5 915 aa14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 AK7Q96M32 723 aa14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 MRPL44Q9H9J2 332 aaKnown RBP14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 GDAQ9Y2T3 454 aa14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 MARCH6O60337 910 aa14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 KRT9P35527 623 aa14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 PAK1Q13153 545 aa14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 GPR101Q96P66 508 aaPredicted RBP14.26□□□□□ -0.13
RAB3IP-201ENST00000247833 GNPATO15228 680 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 PNMA6AP0CW24 399 aaPredicted RBP14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 GABPB1Q06547 395 aaPredicted RBP14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 SEC23AQ15436 765 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 PKN1Q16512 942 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 CCDC178Q5BJE1 867 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 UTP14CQ5TAP6 766 aaKnown RBP14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 TRIM65Q6PJ69 517 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 GOLGA1Q92805 767 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 PARP3Q9Y6F1 533 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 TULP1O00294 542 aaPredicted RBP14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 MYO1BO43795 1136 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 STIM1Q13586 685 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 PPP2R5BQ15173 497 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 INF2Q27J81 1249 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 MARCH10Q8NA82 808 aaPredicted RBP14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 ZNF579Q8NAF0 562 aaKnown RBP14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 PP2D1A8MPX8 630 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 ATP2B2Q01814 1243 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 DIXDC1Q155Q3 683 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 PNMA1Q8ND90 353 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 PHF20Q9BVI0 1012 aa14.25□□□□□ -0.13
RAB3IP-201ENST00000247833 A0A0U1RQJ8 604 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 EFCAB8A8MWE9 144 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 TROAPQ12815 778 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 DTHD1Q6ZMT9 781 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 CNGA4Q8IV77 575 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 MAPKAPK5Q8IW41 473 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 ATRIPQ8WXE1 791 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 RIOK1Q9BRS2 568 aaKnown RBP14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 DCP1AQ9NPI6 582 aaPredicted RBP14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 ADAMTSL3P82987 1691 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 USP17L3A6NCW0 530 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 USP17L4A6NCW7 530 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 KIF20AO95235 890 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 JAKMIP3Q5VZ66 844 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 USP17L1Q7RTZ2 530 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 SLC44A5Q8NCS7 719 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 CCDC47Q96A33 483 aaKnown RBP14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 GSDMAQ96QA5 445 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 ZNF446Q9NWS9 450 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 ATRNO75882 1429 aa14.24□□□□□ -0.13
RAB3IP-201ENST00000247833 TADA3O75528 432 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 CHMP4BP1P59074 171 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 LETM2Q2VYF4 491 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 TGFBRAP1Q8WUH2 860 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 CTAGE9A4FU28 777 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 TRIM49BA6NDI0 452 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 KCNJ6P48051 423 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 KRT31Q15323 416 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 RAD9BQ6WBX8 426 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 KIAA1328Q86T90 577 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 FCHSD1Q86WN1 690 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 BLIDQ8IZY5 108 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 STAG2Q8N3U4 1231 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 UIMC1Q96RL1 719 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 ZCCHC17Q9NP64 241 aaKnown RBP14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 PLEKHG2Q9H7P9 1386 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 FAM237AA0A1B0GTK4 181 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 KCNJ18B7U540 433 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 LDHBP07195 334 aaKnown RBP14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 ZNF18P17022 549 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 CALML3P27482 149 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 KCNJ12Q14500 433 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 NR1I3Q14994 352 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 TERF2Q15554 542 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 TBC1D9BQ66K14 1250 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 CAGE1Q8TC20 777 aa14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 SMARCC1Q92922 1105 aaPredicted RBP14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 BSDC1Q9NW68 430 aaPredicted RBP14.23□□□□□ -0.13
RAB3IP-201ENST00000247833 LAMB4A4D0S4 1761 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 FXR1P51114 621 aaKnown RBP eCLIP14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 NAPAP54920 295 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 SOGA3Q5TF21 947 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 TJP1Q07157 1748 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 PKD1L3Q7Z443 1732 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 NWD2Q9ULI1 1742 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 DDAH1O94760 285 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 TFRCP02786 760 aaKnown RBP14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 SKIDA1Q1XH10 827 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 SLC35F6Q8N357 371 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 NSUN4Q96CB9 384 aaKnown RBP14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 MED15Q96RN5 788 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 BRIP1Q9BX63 1249 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 ABCC6O95255 1503 aa14.22□□□□□ -0.13
RAB3IP-201ENST00000247833 RPN1P04843 607 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms