RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 EVX2Q03828 476 aa24.63■■□□□ 1.53
SH2D3A-201ENST00000245908 DPYDQ12882 1025 aa24.63■■□□□ 1.53
SH2D3A-201ENST00000245908 ZNF174Q15697 407 aa24.63■■□□□ 1.53
SH2D3A-201ENST00000245908 SBK1Q52WX2 424 aa24.63■■□□□ 1.53
SH2D3A-201ENST00000245908 NOM1Q5C9Z4 860 aaKnown RBP24.63■■□□□ 1.53
SH2D3A-201ENST00000245908 TMED8Q6PL24 325 aaPredicted RBP24.63■■□□□ 1.53
SH2D3A-201ENST00000245908 HIBADHP31937 336 aaKnown RBP24.62■■□□□ 1.53
SH2D3A-201ENST00000245908 AFMP43652 599 aa24.62■■□□□ 1.53
SH2D3A-201ENST00000245908 CUL4BQ13620 913 aa24.62■■□□□ 1.53
SH2D3A-201ENST00000245908 SPATA1Q5VX52 437 aa24.62■■□□□ 1.53
SH2D3A-201ENST00000245908 GSDMAQ96QA5 445 aa24.62■■□□□ 1.53
SH2D3A-201ENST00000245908 NYXQ9GZU5 481 aa24.62■■□□□ 1.53
SH2D3A-201ENST00000245908 ARPP21Q9UBL0 812 aaPredicted RBP24.62■■□□□ 1.53
SH2D3A-201ENST00000245908 VWA3AA6NCI4 1184 aa24.61■■□□□ 1.53
SH2D3A-201ENST00000245908 ANKRD2Q9GZV1 360 aa24.61■■□□□ 1.53
SH2D3A-201ENST00000245908 GOLGA6L9A6NEM1 432 aa24.61■■□□□ 1.53
SH2D3A-201ENST00000245908 ZNF771Q7L3S4 317 aaPredicted RBP24.61■■□□□ 1.53
SH2D3A-201ENST00000245908 APTXQ7Z2E3 356 aaKnown RBP24.61■■□□□ 1.53
SH2D3A-201ENST00000245908 NMT2O60551 498 aa24.6■■□□□ 1.53
SH2D3A-201ENST00000245908 SCG2P13521 617 aa24.6■■□□□ 1.53
SH2D3A-201ENST00000245908 CD44P16070 742 aaKnown RBP24.6■■□□□ 1.53
SH2D3A-201ENST00000245908 TRAPPC10P48553 1259 aa24.6■■□□□ 1.53
SH2D3A-201ENST00000245908 LRRN4CLQ8ND94 238 aa24.6■■□□□ 1.53
SH2D3A-201ENST00000245908 SYNRGQ9UMZ2 1314 aa24.6■■□□□ 1.53
SH2D3A-201ENST00000245908 FANCGO15287 622 aa24.6■■□□□ 1.53
SH2D3A-201ENST00000245908 ADKP55263 362 aaKnown RBP24.6■■□□□ 1.53
SH2D3A-201ENST00000245908 PTGDRQ13258 359 aa24.6■■□□□ 1.53
SH2D3A-201ENST00000245908 FAM47AQ5JRC9 791 aa24.6■■□□□ 1.53
SH2D3A-201ENST00000245908 NLRP3Q96P20 1036 aa24.6■■□□□ 1.53
SH2D3A-201ENST00000245908 ZBTB22O15209 634 aa24.59■■□□□ 1.53
SH2D3A-201ENST00000245908 PRDX5P30044 214 aa24.59■■□□□ 1.53
SH2D3A-201ENST00000245908 PFKFB3Q16875 520 aaPredicted RBP24.59■■□□□ 1.53
SH2D3A-201ENST00000245908 ERCC6LQ2NKX8 1250 aa24.59■■□□□ 1.53
SH2D3A-201ENST00000245908 BBXQ8WY36 941 aaPredicted RBP24.59■■□□□ 1.53
SH2D3A-201ENST00000245908 SRRTQ9BXP5 876 aaKnown RBP24.59■■□□□ 1.53
SH2D3A-201ENST00000245908 TFCP2L1Q9NZI6 479 aa24.59■■□□□ 1.53
SH2D3A-201ENST00000245908 CYP2D6P10635 497 aa24.59■■□□□ 1.53
SH2D3A-201ENST00000245908 CDKAL1Q5VV42 579 aa24.59■■□□□ 1.53
SH2D3A-201ENST00000245908 H2AFXP16104 143 aaPredicted RBP24.58■■□□□ 1.53
SH2D3A-201ENST00000245908 CASP1P29466 404 aa24.58■■□□□ 1.53
SH2D3A-201ENST00000245908 NARFQ9UHQ1 456 aa24.58■■□□□ 1.53
SH2D3A-201ENST00000245908 PPP1R3GB7ZBB8 358 aa24.58■■□□□ 1.52
SH2D3A-201ENST00000245908 NLRP5P59047 1200 aa24.58■■□□□ 1.52
SH2D3A-201ENST00000245908 E2F4Q16254 413 aa24.58■■□□□ 1.52
SH2D3A-201ENST00000245908 PARP3Q9Y6F1 533 aa24.57■■□□□ 1.52
SH2D3A-201ENST00000245908 KCNQ4P56696 695 aa24.56■■□□□ 1.52
SH2D3A-201ENST00000245908 RCSD1Q6JBY9 416 aa24.56■■□□□ 1.52
SH2D3A-201ENST00000245908 KLHL10Q6JEL2 608 aa24.56■■□□□ 1.52
SH2D3A-201ENST00000245908 TOGARAM2Q6ZUX3 1019 aa24.56■■□□□ 1.52
SH2D3A-201ENST00000245908 PANX2Q96RD6 677 aa24.56■■□□□ 1.52
SH2D3A-201ENST00000245908 SETDB2Q96T68 719 aa24.56■■□□□ 1.52
SH2D3A-201ENST00000245908 PYM1Q9BRP8 204 aaKnown RBP24.56■■□□□ 1.52
SH2D3A-201ENST00000245908 FAM53CQ9NYF3 392 aa24.56■■□□□ 1.52
SH2D3A-201ENST00000245908 XDHP47989 1333 aa24.56■■□□□ 1.52
SH2D3A-201ENST00000245908 TSPY2A6NKD2 308 aa24.56■■□□□ 1.52
SH2D3A-201ENST00000245908 PBX1P40424 430 aa24.56■■□□□ 1.52
SH2D3A-201ENST00000245908 PIK3AP1Q6ZUJ8 805 aa24.56■■□□□ 1.52
SH2D3A-201ENST00000245908 ADD3Q9UEY8 706 aaKnown RBP24.56■■□□□ 1.52
SH2D3A-201ENST00000245908 IRS2Q9Y4H2 1338 aa24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 AKR1B15C9JRZ8 316 aaPredicted RBP24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 KIF5BP33176 963 aa24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 STX17P56962 302 aa24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 RC3H1Q5TC82 1133 aaKnown RBP24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 NBPF5PQ86XG9 351 aaPredicted RBP24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 IQUBQ8NA54 791 aa24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 CTAGE1Q96RT6 745 aa24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 NUTM2BA6NNL0 878 aaPredicted RBP24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 NUTM2EB1AL46 878 aaPredicted RBP24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 TEX33O43247 280 aa24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 IGSF3O75054 1194 aa24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 URI1O94763 535 aaPredicted RBP24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 NT5C2P49902 561 aa24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 SMIM5Q71RC9 77 aa24.55■■□□□ 1.52
SH2D3A-201ENST00000245908 NPHP1O15259 732 aa24.54■■□□□ 1.52
SH2D3A-201ENST00000245908 PDXDC2PQ6P474 469 aa24.54■■□□□ 1.52
SH2D3A-201ENST00000245908 SRP68Q9UHB9 627 aaKnown RBP24.54■■□□□ 1.52
SH2D3A-201ENST00000245908 BAZ2BQ9UIF8 2168 aaKnown RBP24.54■■□□□ 1.52
SH2D3A-201ENST00000245908 RPS6KA4O75676 772 aa24.54■■□□□ 1.52
SH2D3A-201ENST00000245908 SMYD4Q8IYR2 804 aaPredicted RBP24.54■■□□□ 1.52
SH2D3A-201ENST00000245908 TMEM51Q9NW97 253 aa24.54■■□□□ 1.52
SH2D3A-201ENST00000245908 VEGFAP15692 232 aaPredicted RBP24.53■■□□□ 1.52
SH2D3A-201ENST00000245908 CALML3P27482 149 aa24.53■■□□□ 1.52
SH2D3A-201ENST00000245908 IL17AQ16552 155 aa24.53■■□□□ 1.52
SH2D3A-201ENST00000245908 SPTY2D1Q68D10 685 aaPredicted RBP24.53■■□□□ 1.52
SH2D3A-201ENST00000245908 TADA3O75528 432 aa24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 ARL6IP4Q66PJ3 421 aaKnown RBP24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 TXNRD3Q86VQ6 643 aa24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 KRT222Q8N1A0 295 aa24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 SH3GLB2Q9NR46 395 aa24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 ZNF446Q9NWS9 450 aa24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 MCM9Q9NXL9 1143 aa24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 ADAMTS3O15072 1205 aa24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 GTPBP6O43824 516 aaPredicted RBP24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 MCM7P33993 719 aa24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 ARHGAP29Q52LW3 1261 aa24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 DZIP1Q86YF9 867 aaKnown RBP24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 IGSF22Q8N9C0 903 aa24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 MNS1Q8NEH6 495 aa24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 NAA15Q9BXJ9 866 aaKnown RBP24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 KAT14Q9H8E8 782 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms