RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 CCDC144CPQ8IYA2 1237 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 GBP7Q8N8V2 638 aaPredicted RBP6.4□□□□□ -1.38
RFX4-201ENST00000229387 LZICQ8WZA0 190 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 ACSBG1Q96GR2 724 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 BRD8Q9H0E9 1235 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 PIF1Q9H611 641 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 VCPKMTQ9H867 229 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 VIPAS39Q9H9C1 493 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 RAB21Q9UL25 225 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 SETD1AO15047 1707 aaKnown RBP6.4□□□□□ -1.38
RFX4-201ENST00000229387 UBR1Q8IWV7 1749 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 B4DLN1 442 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 CYP27B1O15528 508 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 RNMTO43148 476 aaKnown RBP6.4□□□□□ -1.38
RFX4-201ENST00000229387 ATF3P18847 181 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 ATP5JP18859 108 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 TXLNAP40222 546 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 INHBCP55103 352 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 ETF1P62495 437 aaKnown RBP6.4□□□□□ -1.38
RFX4-201ENST00000229387 BZW1Q7L1Q6 419 aaKnown RBP6.4□□□□□ -1.38
RFX4-201ENST00000229387 NLGN1Q8N2Q7 840 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 AFAP1L1Q8TED9 768 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 RAPGEF4Q8WZA2 1011 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 TANGO6Q9C0B7 1094 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 L1RE1Q9UN81 338 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 MAPK8IP1Q9UQF2 711 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 TRPC6Q9Y210 931 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 USP16Q9Y5T5 823 aa6.4□□□□□ -1.38
RFX4-201ENST00000229387 DIP2AQ14689 1571 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 KIAA0232Q92628 1395 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 M0R2C6 588 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 MEFVO15553 781 aaPredicted RBP6.4□□□□□ -1.39
RFX4-201ENST00000229387 MGRN1O60291 552 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 PENKP01210 267 aaPredicted RBP6.4□□□□□ -1.39
RFX4-201ENST00000229387 TUBBP07437 444 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 C7P10643 843 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 PDE6BP35913 854 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 GSDMDP57764 484 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 DYNC1I2Q13409 638 aaKnown RBP6.4□□□□□ -1.39
RFX4-201ENST00000229387 COL9A3Q14050 684 aaPredicted RBP6.4□□□□□ -1.39
RFX4-201ENST00000229387 RC3H1Q5TC82 1133 aaKnown RBP6.4□□□□□ -1.39
RFX4-201ENST00000229387 RIC3Q7Z5B4 369 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 ARHGEF25Q86VW2 580 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 ATP11CQ8NB49 1132 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 PRR7Q8TB68 274 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 RHPN1Q8TCX5 695 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 NEK9Q8TD19 979 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 PPP1R13BQ96KQ4 1090 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 AGBL1Q96MI9 1066 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 EBF2Q9HAK2 575 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 ARHGEF10LQ9HCE6 1279 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 HDAC6Q9UBN7 1215 aa6.4□□□□□ -1.39
RFX4-201ENST00000229387 ZNF189O75820 626 aaPredicted RBP6.39□□□□□ -1.39
RFX4-201ENST00000229387 ACTN3Q08043 901 aaPredicted RBP6.39□□□□□ -1.39
RFX4-201ENST00000229387 KIF4BQ2VIQ3 1234 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 CCDC40Q4G0X9 1142 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 ZNF394Q53GI3 561 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 CCDC92Q53HC0 331 aaPredicted RBP6.39□□□□□ -1.39
RFX4-201ENST00000229387 ARL10Q8N8L6 244 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 C8orf37Q96NL8 207 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 SPAG5Q96R06 1193 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 MPHOSPH6Q99547 160 aaKnown RBP6.39□□□□□ -1.39
RFX4-201ENST00000229387 TRIM5Q9C035 493 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 FAM204AQ9H8W3 233 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 TLR7Q9NYK1 1049 aaKnown RBP6.39□□□□□ -1.39
RFX4-201ENST00000229387 RGPD8O14715 1765 aaPredicted RBP6.39□□□□□ -1.39
RFX4-201ENST00000229387 CEP104O60308 925 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 IDO1P14902 403 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 CCT5P48643 541 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 KRT72Q14CN4 511 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 LHX8Q68G74 356 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 COPS6Q7L5N1 327 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 PPP1R14BQ96C90 147 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 ZNF496Q96IT1 587 aaPredicted RBP6.39□□□□□ -1.39
RFX4-201ENST00000229387 ZWILCHQ9H900 591 aa6.39□□□□□ -1.39
RFX4-201ENST00000229387 FAM217BQ9NTX9 383 aaPredicted RBP6.39□□□□□ -1.39
RFX4-201ENST00000229387 CTDP1Q9Y5B0 961 aaPredicted RBP6.39□□□□□ -1.39
RFX4-201ENST00000229387 WDR33Q9C0J8 1336 aaKnown RBP6.39□□□□□ -1.39
RFX4-201ENST00000229387 FRMD3A2A2Y4 597 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 GIGYF1O75420 1035 aaPredicted RBP6.38□□□□□ -1.39
RFX4-201ENST00000229387 PRPF6O94906 941 aaKnown RBP6.38□□□□□ -1.39
RFX4-201ENST00000229387 ATP2B2Q01814 1243 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 BEND3Q5T5X7 828 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 MAMSTRQ6ZN01 415 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 FAM76AQ8TAV0 307 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 MYD88Q99836 296 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 CORO1BQ9BR76 489 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 GBP3Q9H0R5 595 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 BOLA2Q9H3K6 86 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 QPCTLQ9NXS2 382 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 IMPACTQ9P2X3 320 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 ABLIM1O14639 778 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 CREB3O43889 395 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 KIAA0754O94854 1291 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 E4F1Q66K89 784 aaPredicted RBP6.38□□□□□ -1.39
RFX4-201ENST00000229387 CATIPQ7Z7H3 387 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 TMEM110Q86TL2 294 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 AACSQ86V21 672 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 FAM228AQ86W67 206 aa6.38□□□□□ -1.39
RFX4-201ENST00000229387 KCNH5Q8NCM2 988 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms