RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 SSRP1Q08945 709 aaKnown RBP12.37□□□□□ -0.43
CDCA3-201ENST00000229265 TCP10Q12799 353 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 NTRK3Q16288 839 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 SHROOM1Q2M3G4 852 aaPredicted RBP12.37□□□□□ -0.43
CDCA3-201ENST00000229265 CTR9Q6PD62 1173 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 NFXL1Q6ZNB6 911 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 ADGRA1Q86SQ6 560 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 LEO1Q8WVC0 666 aaPredicted RBP12.37□□□□□ -0.43
CDCA3-201ENST00000229265 CCDC102AQ96A19 550 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 MS4A4AQ96JQ5 239 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 C8orf76Q96K31 380 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 UBAC1Q9BSL1 405 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 ELP3Q9H9T3 547 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 TCP11L1Q9NUJ3 509 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 DDX19AQ9NUU7 478 aaKnown RBP12.37□□□□□ -0.43
CDCA3-201ENST00000229265 RTEL1Q9NZ71 1219 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 RBM27Q9P2N5 1060 aaKnown RBP12.37□□□□□ -0.43
CDCA3-201ENST00000229265 SNCAIPQ9Y6H5 919 aa12.37□□□□□ -0.43
CDCA3-201ENST00000229265 MORC2Q9Y6X9 1032 aaPredicted RBP12.37□□□□□ -0.43
CDCA3-201ENST00000229265 GPR75-ASB3A0A0A6YYF3 556 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 PRKAB2O43741 272 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 FMNL1O95466 1100 aaPredicted RBP12.36□□□□□ -0.43
CDCA3-201ENST00000229265 YEATS4O95619 227 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 XBP1P17861 261 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 INPP5BP32019 993 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 ADD1P35611 737 aaKnown RBP12.36□□□□□ -0.43
CDCA3-201ENST00000229265 TM4SF4P48230 202 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 FKBP1BP68106 108 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 EVX2Q03828 476 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 VGLL4Q14135 290 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 HS1BP3Q53T59 392 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 MIGA2Q7L4E1 593 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 CHST3Q7LGC8 479 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 CCDC84Q86UT8 332 aaPredicted RBP12.36□□□□□ -0.43
CDCA3-201ENST00000229265 GAS2L3Q86XJ1 694 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 DGKHQ86XP1 1220 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 DZIP1Q86YF9 867 aaKnown RBP12.36□□□□□ -0.43
CDCA3-201ENST00000229265 TRIM22Q8IYM9 498 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 FANCBQ8NB91 859 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.36□□□□□ -0.432e-7■■■■■ 42.5
CDCA3-201ENST00000229265 ZKSCAN4Q969J2 545 aaPredicted RBP12.36□□□□□ -0.43
CDCA3-201ENST00000229265 DDX11Q96FC9 970 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 DCP1AQ9NPI6 582 aaPredicted RBP12.36□□□□□ -0.43
CDCA3-201ENST00000229265 MYH7P12883 1935 aa12.36□□□□□ -0.43
CDCA3-201ENST00000229265 FAM196BA6NMK8 535 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 GADD45BO75293 160 aaPredicted RBP12.35□□□□□ -0.43
CDCA3-201ENST00000229265 U2AF2P26368 475 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDCA3-201ENST00000229265 RHBDL3P58872 404 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 JAG1P78504 1218 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 CTDSPL2Q05D32 466 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 CCDC173Q0VFZ6 552 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 TRIM29Q14134 588 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 SEC23AQ15436 765 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 ADALQ6DHV7 355 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 TTC6Q86TZ1 520 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 MIGA1Q8NAN2 632 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 KCNG4Q8TDN1 519 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 ZNF296Q8WUU4 475 aaPredicted RBP12.35□□□□□ -0.43
CDCA3-201ENST00000229265 BRI3BPQ8WY22 251 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 PPP1R9BQ96SB3 815 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 ZSCAN10Q96SZ4 725 aaPredicted RBP12.35□□□□□ -0.43
CDCA3-201ENST00000229265 POLR3EQ9NVU0 708 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 NAP1L2Q9ULW6 460 aaPredicted RBP12.35□□□□□ -0.43
CDCA3-201ENST00000229265 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDCA3-201ENST00000229265 GAKO14976 1311 aa12.35□□□□□ -0.43
CDCA3-201ENST00000229265 A0A1W2PQ27 194 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 A0A1W2PQ64 194 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 A0A1W2PQD8 194 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 DDTLA6NHG4 134 aaPredicted RBP12.34□□□□□ -0.43
CDCA3-201ENST00000229265 MINDY4BA8MYZ0 360 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 USP17L12C9JPN9 530 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 USP17L21D6R901 530 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 WDHD1O75717 1129 aaPredicted RBP12.34□□□□□ -0.43
CDCA3-201ENST00000229265 DDAH1O94760 285 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 DEXIO95424 95 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 MOGSQ13724 837 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 C12orf60Q5U649 245 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 HHIPL2Q6UWX4 724 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 CATIPQ7Z7H3 387 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 CRACR2BQ8N4Y2 399 aaPredicted RBP12.34□□□□□ -0.43
CDCA3-201ENST00000229265 TEKT1Q969V4 418 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 RNF26Q9BY78 433 aaPredicted RBP12.34□□□□□ -0.43
CDCA3-201ENST00000229265 TSPY26PQ9H489 355 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 NCOA5Q9HCD5 579 aaKnown RBP12.34□□□□□ -0.43
CDCA3-201ENST00000229265 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.34□□□□□ -0.43
CDCA3-201ENST00000229265 FAM217BQ9NTX9 383 aaPredicted RBP12.34□□□□□ -0.43
CDCA3-201ENST00000229265 PTPRFP10586 1907 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 NEDD4P46934 1319 aa12.34□□□□□ -0.43
CDCA3-201ENST00000229265 GOLGA8AA7E2F4 631 aa12.33□□□□□ -0.44
CDCA3-201ENST00000229265 FIBPO43427 364 aa12.33□□□□□ -0.44
CDCA3-201ENST00000229265 SMARCA1P28370 1054 aa12.33□□□□□ -0.44
CDCA3-201ENST00000229265 CTGFP29279 349 aa12.33□□□□□ -0.44
CDCA3-201ENST00000229265 NASPP49321 788 aaPredicted RBP12.33□□□□□ -0.44
CDCA3-201ENST00000229265 GNAQP50148 359 aa12.33□□□□□ -0.44
CDCA3-201ENST00000229265 HDLBPQ00341 1268 aaKnown RBP12.33□□□□□ -0.44
CDCA3-201ENST00000229265 DGKZQ13574 1117 aa12.33□□□□□ -0.44
CDCA3-201ENST00000229265 SAFBQ15424 915 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDCA3-201ENST00000229265 RBM43Q6ZSC3 357 aaKnown RBP12.33□□□□□ -0.44
CDCA3-201ENST00000229265 ELOA2Q8IYF1 753 aaPredicted RBP12.33□□□□□ -0.44
CDCA3-201ENST00000229265 FAM43AQ8N2R8 423 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms